RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 LAS1LQ9Y4W2 734 aaKnown RBP7.36□□□□□ -1.23
VPS33A-203ENST00000536212 CFAP74Q9C0B2 1584 aa7.36□□□□□ -1.23
VPS33A-203ENST00000536212 HECW2Q9P2P5 1572 aa7.36□□□□□ -1.23
VPS33A-203ENST00000536212 ZFYVE9O95405 1425 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 USP19O94966 1318 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 MAPK8IP3Q9UPT6 1336 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 SMCPP49901 116 aaPredicted RBP7.35□□□□□ -1.23
VPS33A-203ENST00000536212 RARSP54136 660 aaKnown RBP7.35□□□□□ -1.23
VPS33A-203ENST00000536212 KMT5BQ4FZB7 885 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 PROCA1Q8NCQ7 364 aaPredicted RBP7.35□□□□□ -1.23
VPS33A-203ENST00000536212 CLUAP1Q96AJ1 413 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 TBC1D2Q9BYX2 928 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 SLC6A16Q9GZN6 736 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 SLC12A5Q9H2X9 1139 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 POLR3EQ9NVU0 708 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 TOR4AQ9NXH8 423 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 ABCC3O15438 1527 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 ARHGAP31Q2M1Z3 1444 aa7.35□□□□□ -1.23
VPS33A-203ENST00000536212 PIK3C2BO00750 1634 aa7.34□□□□□ -1.23
VPS33A-203ENST00000536212 ANKRD36BQ8N2N9 1353 aa7.34□□□□□ -1.23
VPS33A-203ENST00000536212 AXIN1O15169 862 aa7.34□□□□□ -1.23
VPS33A-203ENST00000536212 CT47B1P0C2W7 299 aaPredicted RBP7.34□□□□□ -1.23
VPS33A-203ENST00000536212 CLK2P49760 499 aaKnown RBP7.34□□□□□ -1.23
VPS33A-203ENST00000536212 FOXC1Q12948 553 aa7.34□□□□□ -1.23
VPS33A-203ENST00000536212 NFKBIBQ15653 356 aa7.34□□□□□ -1.23
VPS33A-203ENST00000536212 TRAK1Q9UPV9 953 aa7.34□□□□□ -1.23
VPS33A-203ENST00000536212 QRICH2Q9H0J4 1663 aa7.34□□□□□ -1.23
VPS33A-203ENST00000536212 ADGRB2O60241 1585 aa7.33□□□□□ -1.24
VPS33A-203ENST00000536212 TULP4Q9NRJ4 1543 aa7.33□□□□□ -1.24
VPS33A-203ENST00000536212 DDX11L8A8MPP1 907 aa7.33□□□□□ -1.24
VPS33A-203ENST00000536212 NR1I2O75469 434 aa7.33□□□□□ -1.24
VPS33A-203ENST00000536212 CD46P15529 392 aa7.33□□□□□ -1.24
VPS33A-203ENST00000536212 MTHFSP49914 203 aa7.33□□□□□ -1.24
VPS33A-203ENST00000536212 TCP11L2Q8N4U5 519 aa7.33□□□□□ -1.24
VPS33A-203ENST00000536212 PMFBP1Q8TBY8 1022 aa7.33□□□□□ -1.24
VPS33A-203ENST00000536212 CFAP53Q96M91 514 aa7.33□□□□□ -1.24
VPS33A-203ENST00000536212 TMEM134Q9H6X4 195 aa7.33□□□□□ -1.24
VPS33A-203ENST00000536212 CD109Q6YHK3 1445 aa7.33□□□□□ -1.24
VPS33A-203ENST00000536212 NEXMIFQ5QGS0 1516 aa7.32□□□□□ -1.24
VPS33A-203ENST00000536212 EVC2Q86UK5 1308 aa7.32□□□□□ -1.24
VPS33A-203ENST00000536212 MED14O60244 1454 aa7.32□□□□□ -1.24
VPS33A-203ENST00000536212 NEO1Q92859 1461 aa7.32□□□□□ -1.24
VPS33A-203ENST00000536212 RPIAP49247 311 aa7.32□□□□□ -1.24
VPS33A-203ENST00000536212 RGS3P49796 1198 aa7.32□□□□□ -1.24
VPS33A-203ENST00000536212 PANK1Q8TE04 598 aa7.32□□□□□ -1.24
VPS33A-203ENST00000536212 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.32□□□□□ -1.24
VPS33A-203ENST00000536212 COG6Q9Y2V7 657 aa7.32□□□□□ -1.24
VPS33A-203ENST00000536212 GLI2P10070 1586 aa7.32□□□□□ -1.24
VPS33A-203ENST00000536212 CAMSAP1Q5T5Y3 1602 aa7.31□□□□□ -1.24
VPS33A-203ENST00000536212 CFHP08603 1231 aa7.31□□□□□ -1.24
VPS33A-203ENST00000536212 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
VPS33A-203ENST00000536212 TMEM132EQ6IEE7 984 aa7.31□□□□□ -1.24
VPS33A-203ENST00000536212 NUTM1Q86Y26 1132 aa7.31□□□□□ -1.24
VPS33A-203ENST00000536212 SPIRE2Q8WWL2 714 aa7.31□□□□□ -1.24
VPS33A-203ENST00000536212 MYH16Q9H6N6 1097 aa7.31□□□□□ -1.24
VPS33A-203ENST00000536212 ABCC11Q96J66 1382 aa7.31□□□□□ -1.24
VPS33A-203ENST00000536212 COL3A1P02461 1466 aaPredicted RBP7.3□□□□□ -1.24
VPS33A-203ENST00000536212 NLRP1Q9C000 1473 aa7.3□□□□□ -1.24
VPS33A-203ENST00000536212 IL16Q14005 1332 aa7.3□□□□□ -1.24
VPS33A-203ENST00000536212 ARHGEF28Q8N1W1 1705 aaKnown RBP7.3□□□□□ -1.24
VPS33A-203ENST00000536212 RLBP1P12271 317 aa7.3□□□□□ -1.24
VPS33A-203ENST00000536212 MCM6Q14566 821 aa7.3□□□□□ -1.24
VPS33A-203ENST00000536212 PLEKHF1Q96S99 279 aa7.3□□□□□ -1.24
VPS33A-203ENST00000536212 PCDHB15Q9Y5E8 787 aa7.3□□□□□ -1.24
VPS33A-203ENST00000536212 TERTO14746 1132 aaKnown RBP7.29□□□□□ -1.24
VPS33A-203ENST00000536212 CANXP27824 592 aaKnown RBP7.29□□□□□ -1.24
VPS33A-203ENST00000536212 GGT6Q6P531 493 aa7.29□□□□□ -1.24
VPS33A-203ENST00000536212 RIC3Q7Z5B4 369 aa7.29□□□□□ -1.24
VPS33A-203ENST00000536212 SCUBE3Q8IX30 993 aa7.29□□□□□ -1.24
VPS33A-203ENST00000536212 CYP4X1Q8N118 509 aa7.29□□□□□ -1.24
VPS33A-203ENST00000536212 RDH13Q8NBN7 331 aa7.29□□□□□ -1.24
VPS33A-203ENST00000536212 RWDD1Q9H446 243 aaPredicted RBP7.29□□□□□ -1.24
VPS33A-203ENST00000536212 SLC52A1Q9NWF4 448 aa7.29□□□□□ -1.24
VPS33A-203ENST00000536212 RRP7AQ9Y3A4 280 aaKnown RBP7.29□□□□□ -1.24
VPS33A-203ENST00000536212 ATAD2Q6PL18 1390 aa7.29□□□□□ -1.24
VPS33A-203ENST00000536212 SIGLEC1Q9BZZ2 1709 aa7.29□□□□□ -1.24
VPS33A-203ENST00000536212 VIRMAQ69YN4 1812 aaKnown RBP7.29□□□□□ -1.24
VPS33A-203ENST00000536212 DIP2CQ9Y2E4 1556 aa7.29□□□□□ -1.24
VPS33A-203ENST00000536212 MVPQ14764 893 aaKnown RBP7.28□□□□□ -1.24
VPS33A-203ENST00000536212 ZKSCAN2Q63HK3 967 aa7.28□□□□□ -1.24
VPS33A-203ENST00000536212 LIMD1Q9UGP4 676 aa7.28□□□□□ -1.24
VPS33A-203ENST00000536212 TNNQ9UQP3 1299 aa7.28□□□□□ -1.24
VPS33A-203ENST00000536212 PNPLA6Q8IY17 1366 aa7.28□□□□□ -1.24
VPS33A-203ENST00000536212 A6NJR5 290 aa7.27□□□□□ -1.25
VPS33A-203ENST00000536212 SPTLC1O15269 473 aa7.27□□□□□ -1.25
VPS33A-203ENST00000536212 CD2BP2O95400 341 aaKnown RBP7.27□□□□□ -1.25
VPS33A-203ENST00000536212 U2AF1L5P0DN76 240 aaPredicted RBP7.27□□□□□ -1.25
VPS33A-203ENST00000536212 TMPOP42166 694 aaKnown RBP7.27□□□□□ -1.25
VPS33A-203ENST00000536212 TNNT2P45379 298 aaPredicted RBP7.27□□□□□ -1.25
VPS33A-203ENST00000536212 U2AF1Q01081 240 aaKnown RBP eCLIP7.27□□□□□ -1.25
VPS33A-203ENST00000536212 HDAC1Q13547 482 aaPredicted RBP7.27□□□□□ -1.25
VPS33A-203ENST00000536212 IDI1Q13907 227 aa7.27□□□□□ -1.25
VPS33A-203ENST00000536212 BECN1Q14457 450 aa7.27□□□□□ -1.25
VPS33A-203ENST00000536212 TUSC1Q2TAM9 212 aa7.27□□□□□ -1.25
VPS33A-203ENST00000536212 RSBN1LQ6PCB5 846 aaPredicted RBP7.27□□□□□ -1.25
VPS33A-203ENST00000536212 FRAT1Q92837 279 aaPredicted RBP7.27□□□□□ -1.25
VPS33A-203ENST00000536212 TBC1D32Q96NH3 1257 aa7.27□□□□□ -1.25
VPS33A-203ENST00000536212 A0A1W2PP64 1363 aa7.27□□□□□ -1.25
VPS33A-203ENST00000536212 PTPRMP28827 1452 aa7.27□□□□□ -1.25
VPS33A-203ENST00000536212 CD163L1Q9NR16 1453 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms