RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 ANKRD44Q8N8A2 993 aa10.12□□□□□ -0.79
COL21A1-212ENST00000535941 SALL3Q9BXA9 1300 aa10.12□□□□□ -0.79
COL21A1-212ENST00000535941 RGPD3A6NKT7 1758 aaPredicted RBP10.12□□□□□ -0.79
COL21A1-212ENST00000535941 RGPD4Q7Z3J3 1758 aa10.12□□□□□ -0.79
COL21A1-212ENST00000535941 CCT4P50991 539 aaKnown RBP10.12□□□□□ -0.79
COL21A1-212ENST00000535941 SKAP1Q86WV1 359 aa10.12□□□□□ -0.79
COL21A1-212ENST00000535941 ITPRIPQ8IWB1 547 aa10.12□□□□□ -0.79
COL21A1-212ENST00000535941 SLC4A2P04920 1241 aa10.11□□□□□ -0.79
COL21A1-212ENST00000535941 C1orf141Q5JVX7 400 aa10.11□□□□□ -0.79
COL21A1-212ENST00000535941 ZNF790Q6PG37 636 aa10.11□□□□□ -0.79
COL21A1-212ENST00000535941 BRWD3Q6RI45 1802 aa10.11□□□□□ -0.79
COL21A1-212ENST00000535941 ERBB4Q15303 1308 aa10.11□□□□□ -0.79
COL21A1-212ENST00000535941 CEP85Q6P2H3 762 aa10.11□□□□□ -0.79
COL21A1-212ENST00000535941 LARP1Q6PKG0 1096 aaKnown RBP10.11□□□□□ -0.79
COL21A1-212ENST00000535941 MYH14Q7Z406 1995 aaKnown RBP10.11□□□□□ -0.79
COL21A1-212ENST00000535941 C4AP0C0L4 1744 aa10.11□□□□□ -0.79
COL21A1-212ENST00000535941 C4BP0C0L5 1744 aa10.11□□□□□ -0.79
COL21A1-212ENST00000535941 GCC1Q96CN9 775 aa10.11□□□□□ -0.79
COL21A1-212ENST00000535941 PDZRN3Q9UPQ7 1066 aa10.11□□□□□ -0.79
COL21A1-212ENST00000535941 IL2RBP14784 551 aa10.1□□□□□ -0.79
COL21A1-212ENST00000535941 RAPGEF4Q8WZA2 1011 aa10.1□□□□□ -0.79
COL21A1-212ENST00000535941 DCTPP1Q9H773 170 aa10.1□□□□□ -0.79
COL21A1-212ENST00000535941 THRAP3Q9Y2W1 955 aaKnown RBP10.1□□□□□ -0.79
COL21A1-212ENST00000535941 ELL2O00472 640 aaPredicted RBP10.1□□□□□ -0.79
COL21A1-212ENST00000535941 BEND3Q5T5X7 828 aa10.1□□□□□ -0.79
COL21A1-212ENST00000535941 CHMP4AQ9BY43 222 aa10.1□□□□□ -0.79
COL21A1-212ENST00000535941 PRDM11Q9NQV5 511 aa10.1□□□□□ -0.79
COL21A1-212ENST00000535941 SPATA31A1Q5TZJ5 1347 aa10.09□□□□□ -0.79
COL21A1-212ENST00000535941 NLRP2Q9NX02 1062 aa10.09□□□□□ -0.79
COL21A1-212ENST00000535941 RPAP2Q8IXW5 612 aaPredicted RBP10.09□□□□□ -0.79
COL21A1-212ENST00000535941 MTX1Q13505 466 aa10.08□□□□□ -0.8
COL21A1-212ENST00000535941 POLA2Q14181 598 aa10.08□□□□□ -0.8
COL21A1-212ENST00000535941 LMOD2Q6P5Q4 547 aa10.08□□□□□ -0.8
COL21A1-212ENST00000535941 BARGINQ6ZT62 677 aa10.08□□□□□ -0.8
COL21A1-212ENST00000535941 ZCRB1Q8TBF4 217 aaKnown RBP10.08□□□□□ -0.8
COL21A1-212ENST00000535941 SPATA31A5Q5VU36 1347 aa10.08□□□□□ -0.8
COL21A1-212ENST00000535941 SPATA31A7Q8IWB4 1347 aa10.08□□□□□ -0.8
COL21A1-212ENST00000535941 PRAMEF22A3QJZ6 481 aa10.08□□□□□ -0.8
COL21A1-212ENST00000535941 FAM161AQ3B820 660 aa10.08□□□□□ -0.8
COL21A1-212ENST00000535941 PHAXQ9H814 394 aaKnown RBP10.08□□□□□ -0.8
COL21A1-212ENST00000535941 CHPF2Q9P2E5 772 aa10.08□□□□□ -0.8
COL21A1-212ENST00000535941 HDGFL1Q5TGJ6 251 aa10.07□□□□□ -0.8
COL21A1-212ENST00000535941 MEIS3Q99687 375 aa10.07□□□□□ -0.8
COL21A1-212ENST00000535941 USP44Q9H0E7 712 aa10.07□□□□□ -0.8
COL21A1-212ENST00000535941 DDX21Q9NR30 783 aaKnown RBP eCLIP10.07□□□□□ -0.8
COL21A1-212ENST00000535941 DBF4Q9UBU7 674 aaPredicted RBP10.07□□□□□ -0.8
COL21A1-212ENST00000535941 SPEF2Q9C093 1822 aa10.07□□□□□ -0.8
COL21A1-212ENST00000535941 TEFQ10587 303 aa10.07□□□□□ -0.8
COL21A1-212ENST00000535941 JCADQ9P266 1359 aa10.06□□□□□ -0.8
COL21A1-212ENST00000535941 PROSER3Q2NL68 480 aa10.06□□□□□ -0.8
COL21A1-212ENST00000535941 VSIG10Q8N0Z9 540 aa10.06□□□□□ -0.8
COL21A1-212ENST00000535941 ATRNO75882 1429 aa10.06□□□□□ -0.8
COL21A1-212ENST00000535941 ANP32AP39687 249 aaKnown RBP10.06□□□□□ -0.8
COL21A1-212ENST00000535941 NFATC2IPQ8NCF5 419 aa10.06□□□□□ -0.8
COL21A1-212ENST00000535941 HYPKQ9NX55 129 aa10.06□□□□□ -0.8
COL21A1-212ENST00000535941 STK31Q9BXU1 1019 aa10.05□□□□□ -0.8
COL21A1-212ENST00000535941 OSBPL3Q9H4L5 887 aa10.05□□□□□ -0.8
COL21A1-212ENST00000535941 UBR3Q6ZT12 1888 aa10.05□□□□□ -0.8
COL21A1-212ENST00000535941 QSER1Q2KHR3 1735 aa10.05□□□□□ -0.8
COL21A1-212ENST00000535941 ALDH1L1O75891 902 aa10.05□□□□□ -0.8
COL21A1-212ENST00000535941 CHD1LQ86WJ1 897 aa10.05□□□□□ -0.8
COL21A1-212ENST00000535941 ZNF496Q96IT1 587 aaPredicted RBP10.05□□□□□ -0.8
COL21A1-212ENST00000535941 BTG4Q9NY30 223 aa10.05□□□□□ -0.8
COL21A1-212ENST00000535941 SSH3Q8TE77 659 aa10.05□□□□□ -0.8
COL21A1-212ENST00000535941 CDCA7Q9BWT1 371 aaPredicted RBP10.05□□□□□ -0.8
COL21A1-212ENST00000535941 F6X3S4 739 aa10.04□□□□□ -0.8
COL21A1-212ENST00000535941 FNBP4Q8N3X1 1017 aaPredicted RBP10.04□□□□□ -0.8
COL21A1-212ENST00000535941 ZBTB47Q9UFB7 747 aaPredicted RBP10.04□□□□□ -0.8
COL21A1-212ENST00000535941 CASP7P55210 303 aa10.04□□□□□ -0.8
COL21A1-212ENST00000535941 KSR2Q6VAB6 950 aa10.04□□□□□ -0.8
COL21A1-212ENST00000535941 TOM1L2Q6ZVM7 507 aa10.04□□□□□ -0.8
COL21A1-212ENST00000535941 SPATA31A6Q5VVP1 1343 aa10.04□□□□□ -0.8
COL21A1-212ENST00000535941 USP42Q9H9J4 1324 aaKnown RBP10.04□□□□□ -0.8
COL21A1-212ENST00000535941 TNS1Q9HBL0 1735 aaKnown RBP10.04□□□□□ -0.8
COL21A1-212ENST00000535941 DOCK2Q92608 1830 aa10.03□□□□□ -0.8
COL21A1-212ENST00000535941 ATP8B2P98198 1209 aa10.03□□□□□ -0.8
COL21A1-212ENST00000535941 ZBTB7CA1YPR0 619 aa10.03□□□□□ -0.8
COL21A1-212ENST00000535941 SNRPA1P09661 255 aaKnown RBP10.03□□□□□ -0.8
COL21A1-212ENST00000535941 KAZALD1Q96I82 304 aa10.03□□□□□ -0.8
COL21A1-212ENST00000535941 DNAAF4Q8WXU2 420 aa10.03□□□□□ -0.8
COL21A1-212ENST00000535941 FMNL2Q96PY5 1086 aa10.03□□□□□ -0.8
COL21A1-212ENST00000535941 C1orf115Q9H7X2 142 aa10.03□□□□□ -0.8
COL21A1-212ENST00000535941 MYH7P12883 1935 aa10.02□□□□□ -0.8
COL21A1-212ENST00000535941 TOM1O60784 492 aa10.02□□□□□ -0.81
COL21A1-212ENST00000535941 BMP2KLQ5H9B9 411 aa10.02□□□□□ -0.81
COL21A1-212ENST00000535941 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
COL21A1-212ENST00000535941 IGKV5-2P06315 115 aa10.02□□□□□ -0.81
COL21A1-212ENST00000535941 GNAI3P08754 354 aa10.02□□□□□ -0.81
COL21A1-212ENST00000535941 NBPF14Q5TI25 921 aa10.02□□□□□ -0.81
COL21A1-212ENST00000535941 NBPF10Q6P3W6 841 aaKnown RBP10.02□□□□□ -0.81
COL21A1-212ENST00000535941 NBPF15Q8N660 670 aa10.02□□□□□ -0.81
COL21A1-212ENST00000535941 ZMYND15Q9H091 742 aa10.02□□□□□ -0.81
COL21A1-212ENST00000535941 KIAA1551Q9HCM1 1747 aa10.02□□□□□ -0.81
COL21A1-212ENST00000535941 AOX1Q06278 1338 aa10.01□□□□□ -0.81
COL21A1-212ENST00000535941 GNAI2P04899 355 aa10.01□□□□□ -0.81
COL21A1-212ENST00000535941 CSB-PGBD3P0DP91 1061 aa10.01□□□□□ -0.81
COL21A1-212ENST00000535941 SLC39A6Q13433 755 aa10.01□□□□□ -0.81
COL21A1-212ENST00000535941 GLIPR1L2Q4G1C9 344 aa10.01□□□□□ -0.81
COL21A1-212ENST00000535941 PDE4CQ08493 712 aa10.01□□□□□ -0.81
COL21A1-212ENST00000535941 PLEKHM2Q8IWE5 1019 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms