RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 HSPA1AP0DMV8 641 aaKnown RBP12.31□□□□□ -0.44
UBB-204ENST00000535788 HSPA1BP0DMV9 641 aaKnown RBP12.31□□□□□ -0.44
UBB-204ENST00000535788 CABP4P57796 275 aa12.31□□□□□ -0.44
UBB-204ENST00000535788 ARHGAP27Q6ZUM4 889 aa12.31□□□□□ -0.44
UBB-204ENST00000535788 ATG3Q9NT62 314 aa12.31□□□□□ -0.44
UBB-204ENST00000535788 C4BP0C0L5 1744 aa12.31□□□□□ -0.44
UBB-204ENST00000535788 LOC102724428A0A0B4J2F2 783 aa12.3□□□□□ -0.44
UBB-204ENST00000535788 SIK1P57059 783 aa12.3□□□□□ -0.44
UBB-204ENST00000535788 AKAP4Q5JQC9 854 aa12.3□□□□□ -0.44
UBB-204ENST00000535788 FLAD1Q8NFF5 587 aa12.3□□□□□ -0.44
UBB-204ENST00000535788 BCS1LQ9Y276 419 aa12.3□□□□□ -0.44
UBB-204ENST00000535788 MTHFSDQ2M296 383 aaKnown RBP12.29□□□□□ -0.44
UBB-204ENST00000535788 PSMD1Q99460 953 aa12.29□□□□□ -0.44
UBB-204ENST00000535788 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.29□□□□□ -0.44
UBB-204ENST00000535788 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
UBB-204ENST00000535788 RBM25P49756 843 aaKnown RBP12.28□□□□□ -0.44
UBB-204ENST00000535788 FSTL1Q12841 308 aa12.28□□□□□ -0.44
UBB-204ENST00000535788 DDX10Q13206 875 aaKnown RBP12.28□□□□□ -0.44
UBB-204ENST00000535788 NEUROD2Q15784 382 aa12.28□□□□□ -0.44
UBB-204ENST00000535788 RGS22Q8NE09 1264 aa12.28□□□□□ -0.44
UBB-204ENST00000535788 AK7Q96M32 723 aa12.28□□□□□ -0.44
UBB-204ENST00000535788 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
UBB-204ENST00000535788 MRC1P22897 1456 aa12.27□□□□□ -0.44
UBB-204ENST00000535788 ADAMTS7Q9UKP4 1686 aa12.27□□□□□ -0.45
UBB-204ENST00000535788 HMGB2P26583 209 aaKnown RBP12.27□□□□□ -0.45
UBB-204ENST00000535788 ATP6V1AP38606 617 aa12.27□□□□□ -0.45
UBB-204ENST00000535788 ITPK1Q13572 414 aa12.27□□□□□ -0.45
UBB-204ENST00000535788 AMIGO3Q86WK7 504 aa12.27□□□□□ -0.45
UBB-204ENST00000535788 NFATC2IPQ8NCF5 419 aa12.27□□□□□ -0.45
UBB-204ENST00000535788 LINC00116Q8NCU8 138 aa12.27□□□□□ -0.45
UBB-204ENST00000535788 RRAGCQ9HB90 399 aa12.27□□□□□ -0.45
UBB-204ENST00000535788 UBR3Q6ZT12 1888 aa12.27□□□□□ -0.45
UBB-204ENST00000535788 ZNF831Q5JPB2 1677 aa12.26□□□□□ -0.45
UBB-204ENST00000535788 A0A0G2JLW4 131 aa12.26□□□□□ -0.45
UBB-204ENST00000535788 RNMTO43148 476 aaKnown RBP12.26□□□□□ -0.45
UBB-204ENST00000535788 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
UBB-204ENST00000535788 U2AF1L5P0DN76 240 aaPredicted RBP12.26□□□□□ -0.45
UBB-204ENST00000535788 PRKAR2BP31323 418 aa12.26□□□□□ -0.45
UBB-204ENST00000535788 ZEB1P37275 1124 aaPredicted RBP12.26□□□□□ -0.45
UBB-204ENST00000535788 U2AF1Q01081 240 aaKnown RBP eCLIP12.26□□□□□ -0.45
UBB-204ENST00000535788 GAS2L2Q8NHY3 880 aa12.26□□□□□ -0.45
UBB-204ENST00000535788 RBM42Q9BTD8 480 aaKnown RBP12.26□□□□□ -0.45
UBB-204ENST00000535788 LGR6Q9HBX8 967 aa12.26□□□□□ -0.45
UBB-204ENST00000535788 C9orf131Q5VYM1 1079 aa12.25□□□□□ -0.45
UBB-204ENST00000535788 SLC4A9Q96Q91 983 aa12.25□□□□□ -0.45
UBB-204ENST00000535788 SLC52A2Q9HAB3 445 aa12.25□□□□□ -0.45
UBB-204ENST00000535788 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
UBB-204ENST00000535788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
UBB-204ENST00000535788 PTCD1O75127 700 aaKnown RBP12.24□□□□□ -0.45
UBB-204ENST00000535788 FCHSD2O94868 740 aa12.24□□□□□ -0.45
UBB-204ENST00000535788 C1orf115Q9H7X2 142 aa12.24□□□□□ -0.45
UBB-204ENST00000535788 TJP1Q07157 1748 aa12.23□□□□□ -0.45
UBB-204ENST00000535788 GNAT3A8MTJ3 354 aa12.23□□□□□ -0.45
UBB-204ENST00000535788 GNPATO15228 680 aa12.23□□□□□ -0.45
UBB-204ENST00000535788 RALBP1Q15311 655 aa12.23□□□□□ -0.45
UBB-204ENST00000535788 PHACTR3Q96KR7 559 aa12.23□□□□□ -0.45
UBB-204ENST00000535788 KDM2BQ8NHM5 1336 aa12.22□□□□□ -0.45
UBB-204ENST00000535788 CENPBP07199 599 aaPredicted RBP12.22□□□□□ -0.45
UBB-204ENST00000535788 SSFA2P28290 1259 aa12.22□□□□□ -0.45
UBB-204ENST00000535788 MTMR7Q9Y216 660 aa12.22□□□□□ -0.45
UBB-204ENST00000535788 CICQ96RK0 1608 aaPredicted RBP12.22□□□□□ -0.45
UBB-204ENST00000535788 CNTNAP4Q9C0A0 1308 aa12.21□□□□□ -0.45
UBB-204ENST00000535788 MMP10P09238 476 aa12.21□□□□□ -0.45
UBB-204ENST00000535788 SLC39A6Q13433 755 aa12.21□□□□□ -0.45
UBB-204ENST00000535788 SMC1BQ8NDV3 1235 aa12.21□□□□□ -0.45
UBB-204ENST00000535788 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.46
UBB-204ENST00000535788 SIPA1L3O60292 1781 aaPredicted RBP12.2□□□□□ -0.46
UBB-204ENST00000535788 TGFB2P61812 414 aa12.2□□□□□ -0.46
UBB-204ENST00000535788 TEFQ10587 303 aa12.2□□□□□ -0.46
UBB-204ENST00000535788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.2□□□□□ -0.46
UBB-204ENST00000535788 IL17REQ8NFR9 667 aa12.2□□□□□ -0.46
UBB-204ENST00000535788 ZNF592Q92610 1267 aa12.2□□□□□ -0.46
UBB-204ENST00000535788 N4BP2Q86UW6 1770 aaPredicted RBP12.2□□□□□ -0.46
UBB-204ENST00000535788 UBR2Q8IWV8 1755 aa12.2□□□□□ -0.46
UBB-204ENST00000535788 MYH14Q7Z406 1995 aaKnown RBP12.19□□□□□ -0.46
UBB-204ENST00000535788 MYBBP1AQ9BQG0 1328 aaKnown RBP12.19□□□□□ -0.46
UBB-204ENST00000535788 DPEP1P16444 411 aa12.19□□□□□ -0.46
UBB-204ENST00000535788 VASPP50552 380 aaPredicted RBP12.19□□□□□ -0.46
UBB-204ENST00000535788 RC3H1Q5TC82 1133 aaKnown RBP12.19□□□□□ -0.46
UBB-204ENST00000535788 RNF181Q9P0P0 153 aa12.19□□□□□ -0.46
UBB-204ENST00000535788 PCDH10Q9P2E7 1040 aa12.19□□□□□ -0.46
UBB-204ENST00000535788 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
UBB-204ENST00000535788 PXDNLA1KZ92 1463 aa12.19□□□□□ -0.46
UBB-204ENST00000535788 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
UBB-204ENST00000535788 FAM161AQ3B820 660 aa12.18□□□□□ -0.46
UBB-204ENST00000535788 DNAJC10Q8IXB1 793 aa12.18□□□□□ -0.46
UBB-204ENST00000535788 C4AP0C0L4 1744 aa12.17□□□□□ -0.46
UBB-204ENST00000535788 E9PSI1 815 aa12.17□□□□□ -0.46
UBB-204ENST00000535788 RPS6KA4O75676 772 aa12.17□□□□□ -0.46
UBB-204ENST00000535788 NEFMP07197 916 aa12.17□□□□□ -0.46
UBB-204ENST00000535788 CRKLP46109 303 aaKnown RBP12.17□□□□□ -0.46
UBB-204ENST00000535788 TMCO4Q5TGY1 634 aa12.17□□□□□ -0.46
UBB-204ENST00000535788 TTC5Q8N0Z6 440 aa12.17□□□□□ -0.46
UBB-204ENST00000535788 RTF1Q92541 710 aaKnown RBP12.17□□□□□ -0.46
UBB-204ENST00000535788 NAP1L5Q96NT1 182 aaPredicted RBP12.17□□□□□ -0.46
UBB-204ENST00000535788 TRAPPC3LQ5T215 181 aa12.16□□□□□ -0.46
UBB-204ENST00000535788 CC2D2BQ6DHV5 1058 aa12.16□□□□□ -0.46
UBB-204ENST00000535788 MCM10Q7L590 875 aa12.16□□□□□ -0.46
UBB-204ENST00000535788 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
UBB-204ENST00000535788 DCTN1Q14203 1278 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms