RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 PTPRCP08575 1304 aa16.82■□□□□ 0.28
LPCAT3-203ENST00000535479 A0A087WWV3 80 aa16.81■□□□□ 0.28
LPCAT3-203ENST00000535479 CCT4P50991 539 aaKnown RBP16.81■□□□□ 0.28
LPCAT3-203ENST00000535479 PRPF40BQ6NWY9 871 aaKnown RBP16.81■□□□□ 0.28
LPCAT3-203ENST00000535479 LRRC59Q96AG4 307 aaKnown RBP16.81■□□□□ 0.28
LPCAT3-203ENST00000535479 ANKRD26Q9UPS8 1709 aa16.81■□□□□ 0.28
LPCAT3-203ENST00000535479 PI4KAP2A4QPH2 592 aa16.81■□□□□ 0.28
LPCAT3-203ENST00000535479 MCCP23508 829 aa16.81■□□□□ 0.28
LPCAT3-203ENST00000535479 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.81■□□□□ 0.28
LPCAT3-203ENST00000535479 PI4KAP1Q8N8J0 262 aa16.81■□□□□ 0.28
LPCAT3-203ENST00000535479 EDC3Q96F86 508 aaKnown RBP16.81■□□□□ 0.28
LPCAT3-203ENST00000535479 FBXW7Q969H0 707 aa16.8■□□□□ 0.28
LPCAT3-203ENST00000535479 ATP8B2P98198 1209 aa16.8■□□□□ 0.28
LPCAT3-203ENST00000535479 CWF19L2Q2TBE0 894 aaKnown RBP16.8■□□□□ 0.28
LPCAT3-203ENST00000535479 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
LPCAT3-203ENST00000535479 AP5Z1O43299 807 aa16.8■□□□□ 0.28
LPCAT3-203ENST00000535479 PTMSP20962 102 aa16.8■□□□□ 0.28
LPCAT3-203ENST00000535479 RUFY3Q7L099 469 aa16.8■□□□□ 0.28
LPCAT3-203ENST00000535479 SNX14Q9Y5W7 946 aa16.8■□□□□ 0.28
LPCAT3-203ENST00000535479 ATP7BP35670 1465 aa16.79■□□□□ 0.28
LPCAT3-203ENST00000535479 IGSF3O75054 1194 aa16.79■□□□□ 0.28
LPCAT3-203ENST00000535479 ADCY5O95622 1261 aa16.79■□□□□ 0.28
LPCAT3-203ENST00000535479 PDLIM2Q96JY6 352 aa16.79■□□□□ 0.28
LPCAT3-203ENST00000535479 TPM2P07951 284 aa16.79■□□□□ 0.28
LPCAT3-203ENST00000535479 CCDC8Q9H0W5 538 aaPredicted RBP16.79■□□□□ 0.28
LPCAT3-203ENST00000535479 SYT1P21579 422 aa16.78■□□□□ 0.28
LPCAT3-203ENST00000535479 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
LPCAT3-203ENST00000535479 TFIP11Q9UBB9 837 aaKnown RBP16.78■□□□□ 0.28
LPCAT3-203ENST00000535479 CKAP2LQ8IYA6 745 aa16.78■□□□□ 0.28
LPCAT3-203ENST00000535479 RHPN1Q8TCX5 695 aa16.78■□□□□ 0.28
LPCAT3-203ENST00000535479 JAKMIP1Q96N16 626 aaKnown RBP16.78■□□□□ 0.28
LPCAT3-203ENST00000535479 DLC1Q96QB1 1528 aa16.78■□□□□ 0.28
LPCAT3-203ENST00000535479 ARHGAP31Q2M1Z3 1444 aa16.77■□□□□ 0.28
LPCAT3-203ENST00000535479 CCDC30Q5VVM6 783 aa16.77■□□□□ 0.28
LPCAT3-203ENST00000535479 ABTB2Q8N961 1025 aa16.77■□□□□ 0.28
LPCAT3-203ENST00000535479 CEP170BQ9Y4F5 1589 aaPredicted RBP16.77■□□□□ 0.28
LPCAT3-203ENST00000535479 SALL3Q9BXA9 1300 aa16.77■□□□□ 0.28
LPCAT3-203ENST00000535479 KCNJ4P48050 445 aa16.77■□□□□ 0.27
LPCAT3-203ENST00000535479 CEBPZQ03701 1054 aaKnown RBP16.77■□□□□ 0.27
LPCAT3-203ENST00000535479 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.27
LPCAT3-203ENST00000535479 GNAT3A8MTJ3 354 aa16.76■□□□□ 0.27
LPCAT3-203ENST00000535479 FAM227BQ96M60 508 aa16.76■□□□□ 0.27
LPCAT3-203ENST00000535479 SLFNL1Q499Z3 407 aa16.76■□□□□ 0.27
LPCAT3-203ENST00000535479 DDX11Q96FC9 970 aa16.76■□□□□ 0.27
LPCAT3-203ENST00000535479 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
LPCAT3-203ENST00000535479 AATKQ6ZMQ8 1374 aa16.75■□□□□ 0.27
LPCAT3-203ENST00000535479 RPAP1Q9BWH6 1393 aaPredicted RBP16.75■□□□□ 0.27
LPCAT3-203ENST00000535479 GJB2P29033 226 aa16.75■□□□□ 0.27
LPCAT3-203ENST00000535479 ZHX1Q9UKY1 873 aaPredicted RBP16.75■□□□□ 0.27
LPCAT3-203ENST00000535479 IBTKQ9P2D0 1353 aaPredicted RBP16.75■□□□□ 0.27
LPCAT3-203ENST00000535479 GNAI3P08754 354 aa16.75■□□□□ 0.27
LPCAT3-203ENST00000535479 LRRC2Q9BYS8 371 aa16.75■□□□□ 0.27
LPCAT3-203ENST00000535479 SMC3Q9UQE7 1217 aa16.75■□□□□ 0.27
LPCAT3-203ENST00000535479 CDC42BPGQ6DT37 1551 aa16.74■□□□□ 0.27
LPCAT3-203ENST00000535479 PI4K2BQ8TCG2 481 aa16.74■□□□□ 0.27
LPCAT3-203ENST00000535479 CLTCQ00610 1675 aaKnown RBP16.74■□□□□ 0.27
LPCAT3-203ENST00000535479 CUL4AQ13619 759 aa16.74■□□□□ 0.27
LPCAT3-203ENST00000535479 CCDC39Q9UFE4 941 aa16.74■□□□□ 0.27
LPCAT3-203ENST00000535479 SPDYE4A6NLX3 237 aa16.73■□□□□ 0.27
LPCAT3-203ENST00000535479 STX6O43752 255 aa16.73■□□□□ 0.27
LPCAT3-203ENST00000535479 OSBPL3Q9H4L5 887 aa16.73■□□□□ 0.27
LPCAT3-203ENST00000535479 PEAK1Q9H792 1746 aa16.73■□□□□ 0.27
LPCAT3-203ENST00000535479 ERCC4Q92889 916 aaPredicted RBP16.73■□□□□ 0.27
LPCAT3-203ENST00000535479 PDCL3Q9H2J4 239 aa16.73■□□□□ 0.27
LPCAT3-203ENST00000535479 BOLA2Q9H3K6 86 aa16.73■□□□□ 0.27
LPCAT3-203ENST00000535479 DIAPH3Q9NSV4 1193 aa16.73■□□□□ 0.27
LPCAT3-203ENST00000535479 MBD3O95983 291 aa16.72■□□□□ 0.27
LPCAT3-203ENST00000535479 HSPA4P34932 840 aa16.72■□□□□ 0.27
LPCAT3-203ENST00000535479 CBX1P83916 185 aa16.72■□□□□ 0.27
LPCAT3-203ENST00000535479 PYCARDQ9ULZ3 195 aa16.72■□□□□ 0.27
LPCAT3-203ENST00000535479 KIAA0232Q92628 1395 aa16.71■□□□□ 0.27
LPCAT3-203ENST00000535479 LSG1Q9H089 658 aaKnown RBP16.71■□□□□ 0.27
LPCAT3-203ENST00000535479 SGSM2O43147 1006 aa16.71■□□□□ 0.27
LPCAT3-203ENST00000535479 ZSCAN22P10073 491 aaPredicted RBP16.71■□□□□ 0.27
LPCAT3-203ENST00000535479 HOXC9P31274 260 aa16.71■□□□□ 0.27
LPCAT3-203ENST00000535479 KIAA2012Q0VF49 1180 aa16.71■□□□□ 0.27
LPCAT3-203ENST00000535479 ZNF500O60304 480 aaPredicted RBP16.7■□□□□ 0.26
LPCAT3-203ENST00000535479 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
LPCAT3-203ENST00000535479 AACSQ86V21 672 aa16.7■□□□□ 0.26
LPCAT3-203ENST00000535479 LUZP1Q86V48 1076 aa16.7■□□□□ 0.26
LPCAT3-203ENST00000535479 MYL6BP14649 208 aa16.7■□□□□ 0.26
LPCAT3-203ENST00000535479 ME3Q16798 604 aa16.7■□□□□ 0.26
LPCAT3-203ENST00000535479 NBPF6Q5VWK0 638 aa16.7■□□□□ 0.26
LPCAT3-203ENST00000535479 NBPF4Q96M43 638 aa16.7■□□□□ 0.26
LPCAT3-203ENST00000535479 C9orf78Q9NZ63 289 aaPredicted RBP16.7■□□□□ 0.26
LPCAT3-203ENST00000535479 WDR33Q9C0J8 1336 aaKnown RBP16.7■□□□□ 0.26
LPCAT3-203ENST00000535479 CDC37L1Q7L3B6 337 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 NAP1L2Q9ULW6 460 aaPredicted RBP16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 RICTORQ6R327 1708 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 NEO1Q92859 1461 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 KDM4AO75164 1064 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 LIG1P18858 919 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 LRMPQ12912 555 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 NAA30Q147X3 362 aaPredicted RBP16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 NRBP1Q9UHY1 535 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
LPCAT3-203ENST00000535479 USP6P35125 1406 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms