RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 FKBP8Q14318 412 aa15.7■□□□□ 0.1
KNTC1-208ENST00000535410 MCM10Q7L590 875 aa15.7■□□□□ 0.1
KNTC1-208ENST00000535410 ZNF784Q8NCA9 323 aaPredicted RBP15.7■□□□□ 0.1
KNTC1-208ENST00000535410 ZBTB1Q9Y2K1 713 aa15.7■□□□□ 0.1
KNTC1-208ENST00000535410 MYBBP1AQ9BQG0 1328 aaKnown RBP15.69■□□□□ 0.1
KNTC1-208ENST00000535410 KCPQ6ZWJ8 1503 aa15.69■□□□□ 0.1
KNTC1-208ENST00000535410 SNRPA1P09661 255 aaKnown RBP15.69■□□□□ 0.1
KNTC1-208ENST00000535410 TM4SF1P30408 202 aa15.69■□□□□ 0.1
KNTC1-208ENST00000535410 IL6STP40189 918 aaPredicted RBP15.69■□□□□ 0.1
KNTC1-208ENST00000535410 EIF5P55010 431 aaKnown RBP15.69■□□□□ 0.1
KNTC1-208ENST00000535410 COL15A1P39059 1388 aa15.69■□□□□ 0.1
KNTC1-208ENST00000535410 NFE2L2Q16236 605 aa15.68■□□□□ 0.1
KNTC1-208ENST00000535410 PLEKHF1Q96S99 279 aa15.68■□□□□ 0.1
KNTC1-208ENST00000535410 MYH14Q7Z406 1995 aaKnown RBP15.67■□□□□ 0.1
KNTC1-208ENST00000535410 TJP1Q07157 1748 aa15.66■□□□□ 0.1
KNTC1-208ENST00000535410 A0A0G2JLW4 131 aa15.66■□□□□ 0.1
KNTC1-208ENST00000535410 LMOD3Q0VAK6 560 aa15.66■□□□□ 0.1
KNTC1-208ENST00000535410 PIM2Q9P1W9 311 aa15.66■□□□□ 0.1
KNTC1-208ENST00000535410 ZNF330Q9Y3S2 320 aaPredicted RBP15.66■□□□□ 0.1
KNTC1-208ENST00000535410 C10orf71Q711Q0 1435 aa15.66■□□□□ 0.1
KNTC1-208ENST00000535410 CHD4Q14839 1912 aa15.66■□□□□ 0.1
KNTC1-208ENST00000535410 POLRMTO00411 1230 aaKnown RBP15.65■□□□□ 0.1
KNTC1-208ENST00000535410 DPEP1P16444 411 aa15.65■□□□□ 0.1
KNTC1-208ENST00000535410 DCTN1Q14203 1278 aa15.65■□□□□ 0.1
KNTC1-208ENST00000535410 WDR43Q15061 677 aaKnown RBP eCLIP15.65■□□□□ 0.1
KNTC1-208ENST00000535410 BCS1LQ9Y276 419 aa15.65■□□□□ 0.1
KNTC1-208ENST00000535410 A1BGP04217 495 aa15.64■□□□□ 0.09
KNTC1-208ENST00000535410 DDR1Q08345 913 aa15.64■□□□□ 0.09
KNTC1-208ENST00000535410 NFIXQ14938 502 aa15.64■□□□□ 0.09
KNTC1-208ENST00000535410 PDZRN3Q9UPQ7 1066 aa15.64■□□□□ 0.09
KNTC1-208ENST00000535410 C4AP0C0L4 1744 aa15.63■□□□□ 0.09
KNTC1-208ENST00000535410 KCNQ3O43525 872 aa15.63■□□□□ 0.09
KNTC1-208ENST00000535410 SERPINB2P05120 415 aa15.63■□□□□ 0.09
KNTC1-208ENST00000535410 DALRD3Q5D0E6 543 aaKnown RBP15.63■□□□□ 0.09
KNTC1-208ENST00000535410 USP16Q9Y5T5 823 aa15.63■□□□□ 0.09
KNTC1-208ENST00000535410 RGL2O15211 777 aa15.62■□□□□ 0.09
KNTC1-208ENST00000535410 RIPK4P57078 832 aa15.62■□□□□ 0.09
KNTC1-208ENST00000535410 CLEC4GQ6UXB4 293 aa15.62■□□□□ 0.09
KNTC1-208ENST00000535410 SETDB2Q96T68 719 aa15.62■□□□□ 0.09
KNTC1-208ENST00000535410 BABAM1Q9NWV8 329 aa15.62■□□□□ 0.09
KNTC1-208ENST00000535410 TBC1D2BQ9UPU7 963 aa15.62■□□□□ 0.09
KNTC1-208ENST00000535410 ZNF652Q9Y2D9 606 aa15.62■□□□□ 0.09
KNTC1-208ENST00000535410 PXDNLA1KZ92 1463 aa15.62■□□□□ 0.09
KNTC1-208ENST00000535410 UBR2Q8IWV8 1755 aa15.62■□□□□ 0.09
KNTC1-208ENST00000535410 VIRMAQ69YN4 1812 aaKnown RBP15.61■□□□□ 0.09
KNTC1-208ENST00000535410 NPHP1O15259 732 aa15.61■□□□□ 0.09
KNTC1-208ENST00000535410 DZIP3Q86Y13 1208 aaKnown RBP15.61■□□□□ 0.09
KNTC1-208ENST00000535410 BCL2L12Q9HB09 334 aa15.61■□□□□ 0.09
KNTC1-208ENST00000535410 WWC3Q9ULE0 1092 aa15.61■□□□□ 0.09
KNTC1-208ENST00000535410 BICDL1Q6ZP65 573 aa15.6■□□□□ 0.09
KNTC1-208ENST00000535410 ARHGAP27Q6ZUM4 889 aa15.6■□□□□ 0.09
KNTC1-208ENST00000535410 UTRNP46939 3433 aa15.59■□□□□ 0.09
KNTC1-208ENST00000535410 H0YIN7 160 aa15.59■□□□□ 0.09
KNTC1-208ENST00000535410 PDE6BP35913 854 aa15.59■□□□□ 0.09
KNTC1-208ENST00000535410 RUNDC1Q96C34 613 aa15.59■□□□□ 0.09
KNTC1-208ENST00000535410 PRKRIP1Q9H875 184 aaPredicted RBP15.59■□□□□ 0.09
KNTC1-208ENST00000535410 MIS18AQ9NYP9 233 aa15.59■□□□□ 0.09
KNTC1-208ENST00000535410 SIPA1L3O60292 1781 aaPredicted RBP15.59■□□□□ 0.09
KNTC1-208ENST00000535410 GIGYF1O75420 1035 aaPredicted RBP15.58■□□□□ 0.08
KNTC1-208ENST00000535410 KCNA3P22001 575 aa15.58■□□□□ 0.08
KNTC1-208ENST00000535410 TMPOP42166 694 aaKnown RBP15.58■□□□□ 0.08
KNTC1-208ENST00000535410 TBC1D9BQ66K14 1250 aa15.58■□□□□ 0.08
KNTC1-208ENST00000535410 BRIP1Q9BX63 1249 aa15.58■□□□□ 0.08
KNTC1-208ENST00000535410 GPBP1L1Q9HC44 474 aaPredicted RBP15.58■□□□□ 0.08
KNTC1-208ENST00000535410 TSPYL4Q9UJ04 414 aa15.58■□□□□ 0.08
KNTC1-208ENST00000535410 CARMIL3Q8ND23 1372 aa15.58■□□□□ 0.08
KNTC1-208ENST00000535410 KIF13BQ9NQT8 1826 aa15.57■□□□□ 0.08
KNTC1-208ENST00000535410 CAMTA2O94983 1202 aa15.57■□□□□ 0.08
KNTC1-208ENST00000535410 EIF4A1P60842 406 aaKnown RBP15.57■□□□□ 0.08
KNTC1-208ENST00000535410 POTEDQ86YR6 584 aa15.57■□□□□ 0.08
KNTC1-208ENST00000535410 PRAMEF22A3QJZ6 481 aa15.56■□□□□ 0.08
KNTC1-208ENST00000535410 CHRNA5P30532 468 aa15.56■□□□□ 0.08
KNTC1-208ENST00000535410 ST5P78524 1137 aa15.56■□□□□ 0.08
KNTC1-208ENST00000535410 C2CD5Q86YS7 1000 aa15.56■□□□□ 0.08
KNTC1-208ENST00000535410 TTLL6Q8N841 843 aa15.56■□□□□ 0.08
KNTC1-208ENST00000535410 CNBD1Q8NA66 436 aa15.56■□□□□ 0.08
KNTC1-208ENST00000535410 THUMPD2Q9BTF0 503 aaKnown RBP15.56■□□□□ 0.08
KNTC1-208ENST00000535410 ERBB4Q15303 1308 aa15.55■□□□□ 0.08
KNTC1-208ENST00000535410 TPTE2Q6XPS3 522 aa15.55■□□□□ 0.08
KNTC1-208ENST00000535410 GOLGB1Q14789 3259 aaKnown RBP15.55■□□□□ 0.08
KNTC1-208ENST00000535410 NEUROD2Q15784 382 aa15.54■□□□□ 0.08
KNTC1-208ENST00000535410 NBPF5PQ86XG9 351 aaPredicted RBP15.54■□□□□ 0.08
KNTC1-208ENST00000535410 ADAMTS8Q9UP79 889 aa15.54■□□□□ 0.08
KNTC1-208ENST00000535410 ATP10DQ9P241 1426 aa15.53■□□□□ 0.08
KNTC1-208ENST00000535410 NBPF26B4DH59 902 aa15.53■□□□□ 0.08
KNTC1-208ENST00000535410 ERVV-1B6SEH8 477 aa15.53■□□□□ 0.08
KNTC1-208ENST00000535410 PIP4K2AP48426 406 aaPredicted RBP15.53■□□□□ 0.08
KNTC1-208ENST00000535410 C1QTNF8P60827 252 aa15.53■□□□□ 0.08
KNTC1-208ENST00000535410 NBPF10Q6P3W6 841 aaKnown RBP15.53■□□□□ 0.08
KNTC1-208ENST00000535410 KIF6Q6ZMV9 814 aa15.53■□□□□ 0.08
KNTC1-208ENST00000535410 CCDC146Q8IYE0 955 aa15.53■□□□□ 0.08
KNTC1-208ENST00000535410 NBPF15Q8N660 670 aa15.53■□□□□ 0.08
KNTC1-208ENST00000535410 RRP7AQ9Y3A4 280 aaKnown RBP15.53■□□□□ 0.08
KNTC1-208ENST00000535410 GTF2E1P29083 439 aaPredicted RBP15.52■□□□□ 0.08
KNTC1-208ENST00000535410 CALD1Q05682 793 aaKnown RBP15.52■□□□□ 0.08
KNTC1-208ENST00000535410 PRR5LQ6MZQ0 368 aa15.52■□□□□ 0.08
KNTC1-208ENST00000535410 CNKSR1Q969H4 720 aa15.52■□□□□ 0.08
KNTC1-208ENST00000535410 ZNF622Q969S3 477 aaKnown RBP eCLIP15.52■□□□□ 0.08
KNTC1-208ENST00000535410 NIP7Q9Y221 180 aaKnown RBP eCLIP15.52■□□□□ 0.08
KNTC1-208ENST00000535410 ADCY9O60503 1353 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms