RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 CYP4F22Q6NT55 531 aa10.93□□□□□ -0.66
CPSF7-214ENST00000535222 SLC4A9Q96Q91 983 aa10.93□□□□□ -0.66
CPSF7-214ENST00000535222 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-214ENST00000535222 ADAMTS7Q9UKP4 1686 aa10.92□□□□□ -0.66
CPSF7-214ENST00000535222 TATP17735 454 aaPredicted RBP10.92□□□□□ -0.66
CPSF7-214ENST00000535222 PNMA8AQ86V59 439 aaPredicted RBP10.92□□□□□ -0.66
CPSF7-214ENST00000535222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.92□□□□□ -0.66
CPSF7-214ENST00000535222 RAPGEF4Q8WZA2 1011 aa10.92□□□□□ -0.66
CPSF7-214ENST00000535222 TLL2Q9Y6L7 1015 aa10.92□□□□□ -0.66
CPSF7-214ENST00000535222 USP42Q9H9J4 1324 aaKnown RBP10.91□□□□□ -0.66
CPSF7-214ENST00000535222 DLEC1Q9Y238 1755 aa10.91□□□□□ -0.66
CPSF7-214ENST00000535222 HHIPL1Q96JK4 782 aa10.91□□□□□ -0.66
CPSF7-214ENST00000535222 ATG3Q9NT62 314 aa10.91□□□□□ -0.66
CPSF7-214ENST00000535222 MON2Q7Z3U7 1717 aa10.91□□□□□ -0.66
CPSF7-214ENST00000535222 FER1L6Q2WGJ9 1857 aa10.91□□□□□ -0.66
CPSF7-214ENST00000535222 RGPD2P0DJD1 1756 aa10.9□□□□□ -0.66
CPSF7-214ENST00000535222 PITPNM2Q9BZ72 1349 aa10.9□□□□□ -0.66
CPSF7-214ENST00000535222 AOC2O75106 756 aa10.9□□□□□ -0.66
CPSF7-214ENST00000535222 CST9Q5W186 159 aa10.9□□□□□ -0.66
CPSF7-214ENST00000535222 MAP1SQ66K74 1059 aaPredicted RBP10.9□□□□□ -0.66
CPSF7-214ENST00000535222 RANBP2P49792 3224 aaKnown RBP10.9□□□□□ -0.66
CPSF7-214ENST00000535222 MYH14Q7Z406 1995 aaKnown RBP10.89□□□□□ -0.67
CPSF7-214ENST00000535222 HACL1Q9UJ83 578 aa10.89□□□□□ -0.67
CPSF7-214ENST00000535222 EPHX2P34913 555 aa10.88□□□□□ -0.67
CPSF7-214ENST00000535222 EAPPQ56P03 285 aaPredicted RBP10.88□□□□□ -0.67
CPSF7-214ENST00000535222 TRIOBPQ9H2D6 2365 aa10.88□□□□□ -0.67
CPSF7-214ENST00000535222 NRXN2Q9P2S2 1712 aa10.87□□□□□ -0.67
CPSF7-214ENST00000535222 SAPCD2Q86UD0 394 aa10.87□□□□□ -0.67
CPSF7-214ENST00000535222 TMOD3Q9NYL9 352 aa10.87□□□□□ -0.67
CPSF7-214ENST00000535222 SRP68Q9UHB9 627 aaKnown RBP10.87□□□□□ -0.67
CPSF7-214ENST00000535222 CLEC11AQ9Y240 323 aa10.87□□□□□ -0.67
CPSF7-214ENST00000535222 COL5A3P25940 1745 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-214ENST00000535222 SLC17A8Q8NDX2 589 aa10.86□□□□□ -0.67
CPSF7-214ENST00000535222 TAOK3Q9H2K8 898 aa10.86□□□□□ -0.67
CPSF7-214ENST00000535222 BRCA2P51587 3418 aa10.86□□□□□ -0.67
CPSF7-214ENST00000535222 RTL1A6NKG5 1358 aa10.86□□□□□ -0.67
CPSF7-214ENST00000535222 EDC4Q6P2E9 1401 aaKnown RBP10.85□□□□□ -0.67
CPSF7-214ENST00000535222 H0YIN7 160 aa10.85□□□□□ -0.67
CPSF7-214ENST00000535222 C2CD5Q86YS7 1000 aa10.85□□□□□ -0.67
CPSF7-214ENST00000535222 USHBP1Q8N6Y0 703 aa10.85□□□□□ -0.67
CPSF7-214ENST00000535222 SAGE1Q9NXZ1 904 aa10.85□□□□□ -0.67
CPSF7-214ENST00000535222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.85□□□□□ -0.674e-9■■■□□ 15.2
CPSF7-214ENST00000535222 PDZRN3Q9UPQ7 1066 aa10.85□□□□□ -0.67
CPSF7-214ENST00000535222 C21orf2O43822 256 aa10.84□□□□□ -0.67
CPSF7-214ENST00000535222 AMPHP49418 695 aa10.84□□□□□ -0.67
CPSF7-214ENST00000535222 CEP290O15078 2479 aa10.84□□□□□ -0.67
CPSF7-214ENST00000535222 FMR1Q06787 632 aaKnown RBP eCLIP10.83□□□□□ -0.68
CPSF7-214ENST00000535222 CIAPIN1Q6FI81 312 aa10.83□□□□□ -0.68
CPSF7-214ENST00000535222 PAXIP1Q6ZW49 1069 aaPredicted RBP10.83□□□□□ -0.68
CPSF7-214ENST00000535222 HPS5Q9UPZ3 1129 aa10.83□□□□□ -0.68
CPSF7-214ENST00000535222 AFDNP55196 1824 aaKnown RBP10.83□□□□□ -0.68
CPSF7-214ENST00000535222 GRM1Q13255 1194 aa10.82□□□□□ -0.68
CPSF7-214ENST00000535222 NFIXQ14938 502 aa10.82□□□□□ -0.68
CPSF7-214ENST00000535222 CTU1Q7Z7A3 348 aaKnown RBP10.82□□□□□ -0.68
CPSF7-214ENST00000535222 TRPM7Q96QT4 1865 aa10.82□□□□□ -0.68
CPSF7-214ENST00000535222 NCAPD2Q15021 1401 aa10.82□□□□□ -0.68
CPSF7-214ENST00000535222 FZD9O00144 591 aa10.81□□□□□ -0.68
CPSF7-214ENST00000535222 SERPINB2P05120 415 aa10.81□□□□□ -0.68
CPSF7-214ENST00000535222 FBLN1P23142 703 aa10.81□□□□□ -0.68
CPSF7-214ENST00000535222 CRKLP46109 303 aaKnown RBP10.81□□□□□ -0.68
CPSF7-214ENST00000535222 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
CPSF7-214ENST00000535222 NOGQ13253 232 aa10.81□□□□□ -0.68
CPSF7-214ENST00000535222 PKN2Q16513 984 aaKnown RBP10.81□□□□□ -0.68
CPSF7-214ENST00000535222 UNC80Q8N2C7 3258 aa10.81□□□□□ -0.68
CPSF7-214ENST00000535222 ZNF541Q9H0D2 1346 aa10.81□□□□□ -0.68
CPSF7-214ENST00000535222 HTTP42858 3142 aa10.8□□□□□ -0.68
CPSF7-214ENST00000535222 CENPFP49454 3210 aa10.8□□□□□ -0.68
CPSF7-214ENST00000535222 SOGA3Q5TF21 947 aa10.8□□□□□ -0.68
CPSF7-214ENST00000535222 C7orf43Q8WVR3 580 aa10.8□□□□□ -0.68
CPSF7-214ENST00000535222 SPG7Q9UQ90 795 aa10.8□□□□□ -0.68
CPSF7-214ENST00000535222 VCANP13611 3396 aa10.79□□□□□ -0.68
CPSF7-214ENST00000535222 ERVV-2B6SEH9 535 aa10.79□□□□□ -0.68
CPSF7-214ENST00000535222 USPL1Q5W0Q7 1092 aa10.79□□□□□ -0.68
CPSF7-214ENST00000535222 INTS5Q6P9B9 1019 aaKnown RBP10.79□□□□□ -0.68
CPSF7-214ENST00000535222 HDGFL2Q7Z4V5 671 aaPredicted RBP10.79□□□□□ -0.68
CPSF7-214ENST00000535222 PPARGC1BQ86YN6 1023 aaKnown RBP10.79□□□□□ -0.68
CPSF7-214ENST00000535222 GPC2Q8N158 579 aa10.79□□□□□ -0.68
CPSF7-214ENST00000535222 ZIC5Q96T25 663 aa10.79□□□□□ -0.68
CPSF7-214ENST00000535222 RNF123Q5XPI4 1314 aa10.79□□□□□ -0.68
CPSF7-214ENST00000535222 TONSLQ96HA7 1378 aa10.78□□□□□ -0.68
CPSF7-214ENST00000535222 LAMA3Q16787 3333 aa10.78□□□□□ -0.68
CPSF7-214ENST00000535222 ZPR1O75312 459 aa10.78□□□□□ -0.68
CPSF7-214ENST00000535222 PHKG2P15735 406 aa10.78□□□□□ -0.68
CPSF7-214ENST00000535222 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
CPSF7-214ENST00000535222 BRIP1Q9BX63 1249 aa10.78□□□□□ -0.68
CPSF7-214ENST00000535222 BCL2L12Q9HB09 334 aa10.78□□□□□ -0.68
CPSF7-214ENST00000535222 CARMIL3Q8ND23 1372 aa10.77□□□□□ -0.68
CPSF7-214ENST00000535222 TRAF5O00463 557 aa10.77□□□□□ -0.69
CPSF7-214ENST00000535222 PDE6BP35913 854 aa10.77□□□□□ -0.69
CPSF7-214ENST00000535222 AKAP4Q5JQC9 854 aa10.77□□□□□ -0.69
CPSF7-214ENST00000535222 USP50Q70EL3 339 aaPredicted RBP10.77□□□□□ -0.69
CPSF7-214ENST00000535222 IFNL2Q8IZJ0 200 aa10.77□□□□□ -0.69
CPSF7-214ENST00000535222 COG3Q96JB2 828 aa10.77□□□□□ -0.69
CPSF7-214ENST00000535222 NARFQ9UHQ1 456 aa10.77□□□□□ -0.69
CPSF7-214ENST00000535222 COLQQ9Y215 455 aaPredicted RBP10.77□□□□□ -0.69
CPSF7-214ENST00000535222 KIF24Q5T7B8 1368 aa10.77□□□□□ -0.69
CPSF7-214ENST00000535222 SPTBN5Q9NRC6 3674 aaKnown RBP10.76□□□□□ -0.69
CPSF7-214ENST00000535222 HSP90AB2PQ58FF8 381 aa10.76□□□□□ -0.69
CPSF7-214ENST00000535222 CNKSR1Q969H4 720 aa10.76□□□□□ -0.69
CPSF7-214ENST00000535222 ZNF622Q969S3 477 aaKnown RBP eCLIP10.76□□□□□ -0.692e-6■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms