RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 RNF217Q8TC41 542 aa6.51□□□□□ -1.37
SNHG1-201ENST00000535076 FAM210AQ96ND0 272 aa6.51□□□□□ -1.37
SNHG1-201ENST00000535076 CCDC85AQ96PX6 553 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-201ENST00000535076 CEP83Q9Y592 693 aa6.51□□□□□ -1.37
SNHG1-201ENST00000535076 KIF1CO43896 1103 aaKnown RBP6.5□□□□□ -1.37
SNHG1-201ENST00000535076 ZNF500O60304 480 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-201ENST00000535076 ARID4AP29374 1257 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-201ENST00000535076 PTGIRP43119 386 aa6.5□□□□□ -1.37
SNHG1-201ENST00000535076 ERVK-9P63128 1117 aa6.5□□□□□ -1.37
SNHG1-201ENST00000535076 VAC14Q08AM6 782 aa6.5□□□□□ -1.37
SNHG1-201ENST00000535076 NPAS3Q8IXF0 933 aa6.5□□□□□ -1.37
SNHG1-201ENST00000535076 DCAF11Q8TEB1 546 aa6.5□□□□□ -1.37
SNHG1-201ENST00000535076 POM121Q96HA1 1249 aa6.5□□□□□ -1.37
SNHG1-201ENST00000535076 CCDC94Q9BW85 323 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-201ENST00000535076 CDCA7Q9BWT1 371 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-201ENST00000535076 ISY1Q9ULR0 285 aaKnown RBP6.5□□□□□ -1.37
SNHG1-201ENST00000535076 NISCHQ9Y2I1 1504 aa6.5□□□□□ -1.37
SNHG1-201ENST00000535076 SENP3-EIF4A1A0A087X0R7 540 aa6.49□□□□□ -1.37
SNHG1-201ENST00000535076 LOC102724159A0A0B4J2E5 919 aa6.49□□□□□ -1.37
SNHG1-201ENST00000535076 RAD21O60216 631 aa6.49□□□□□ -1.37
SNHG1-201ENST00000535076 VSIG8P0DPA2 414 aa6.49□□□□□ -1.37
SNHG1-201ENST00000535076 NEFHP12036 1026 aa6.49□□□□□ -1.37
SNHG1-201ENST00000535076 ERCC3P19447 782 aa6.49□□□□□ -1.37
SNHG1-201ENST00000535076 PTSQ03393 145 aa6.49□□□□□ -1.37
SNHG1-201ENST00000535076 FAM50AQ14320 339 aaKnown RBP6.49□□□□□ -1.37
SNHG1-201ENST00000535076 PWP2Q15269 919 aaKnown RBP6.49□□□□□ -1.37
SNHG1-201ENST00000535076 OSBPL3Q9H4L5 887 aa6.49□□□□□ -1.37
SNHG1-201ENST00000535076 CEP126Q9P2H0 1117 aa6.49□□□□□ -1.37
SNHG1-201ENST00000535076 PCDHB11Q9Y5F2 797 aa6.49□□□□□ -1.37
SNHG1-201ENST00000535076 IGF1RP08069 1367 aa6.48□□□□□ -1.37
SNHG1-201ENST00000535076 DYNC1I1O14576 645 aa6.48□□□□□ -1.37
SNHG1-201ENST00000535076 ABL2P42684 1182 aa6.48□□□□□ -1.37
SNHG1-201ENST00000535076 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.48□□□□□ -1.37
SNHG1-201ENST00000535076 CCDC125Q86Z20 511 aa6.48□□□□□ -1.37
SNHG1-201ENST00000535076 PHTF2Q8N3S3 785 aa6.48□□□□□ -1.37
SNHG1-201ENST00000535076 MSL3Q8N5Y2 521 aaKnown RBP6.48□□□□□ -1.37
SNHG1-201ENST00000535076 KCTD17Q8N5Z5 321 aa6.48□□□□□ -1.37
SNHG1-201ENST00000535076 GPR161Q8N6U8 529 aaKnown RBP6.48□□□□□ -1.37
SNHG1-201ENST00000535076 SNRNP27Q8WVK2 155 aaKnown RBP6.48□□□□□ -1.37
SNHG1-201ENST00000535076 ITFG2Q969R8 447 aa6.48□□□□□ -1.37
SNHG1-201ENST00000535076 MYCBPQ99417 103 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-201ENST00000535076 POLMQ9NP87 494 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-201ENST00000535076 COG6Q9Y2V7 657 aa6.48□□□□□ -1.37
SNHG1-201ENST00000535076 RAD50Q92878 1312 aa6.48□□□□□ -1.37
SNHG1-201ENST00000535076 SLC35F4A4IF30 521 aa6.47□□□□□ -1.37
SNHG1-201ENST00000535076 TULP2O00295 520 aa6.47□□□□□ -1.37
SNHG1-201ENST00000535076 TRAK2O60296 914 aa6.47□□□□□ -1.37
SNHG1-201ENST00000535076 CCDC172P0C7W6 258 aa6.47□□□□□ -1.37
SNHG1-201ENST00000535076 ITGAEP38570 1179 aa6.47□□□□□ -1.37
SNHG1-201ENST00000535076 MNS1Q8NEH6 495 aa6.47□□□□□ -1.37
SNHG1-201ENST00000535076 SLC16A10Q8TF71 515 aa6.47□□□□□ -1.37
SNHG1-201ENST00000535076 IRF7Q92985 503 aa6.47□□□□□ -1.37
SNHG1-201ENST00000535076 PAIP2Q9BPZ3 127 aaKnown RBP6.47□□□□□ -1.37
SNHG1-201ENST00000535076 RIPOR2Q9Y4F9 1068 aa6.47□□□□□ -1.37
SNHG1-201ENST00000535076 CADPSQ9ULU8 1353 aa6.46□□□□□ -1.37
SNHG1-201ENST00000535076 CCDC66A2RUB6 948 aa6.46□□□□□ -1.38
SNHG1-201ENST00000535076 APBB1O00213 710 aa6.46□□□□□ -1.38
SNHG1-201ENST00000535076 ANP32CO43423 234 aa6.46□□□□□ -1.38
SNHG1-201ENST00000535076 STAU1O95793 577 aaKnown RBP6.46□□□□□ -1.38
SNHG1-201ENST00000535076 KRT76Q01546 638 aa6.46□□□□□ -1.38
SNHG1-201ENST00000535076 NFKBIBQ15653 356 aa6.46□□□□□ -1.38
SNHG1-201ENST00000535076 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-201ENST00000535076 NGEFQ8N5V2 710 aa6.46□□□□□ -1.38
SNHG1-201ENST00000535076 CCDC155Q8N6L0 562 aa6.46□□□□□ -1.38
SNHG1-201ENST00000535076 SGSM3Q96HU1 749 aa6.46□□□□□ -1.38
SNHG1-201ENST00000535076 NCAPGQ9BPX3 1015 aa6.46□□□□□ -1.38
SNHG1-201ENST00000535076 BRMS1Q9HCU9 246 aa6.46□□□□□ -1.38
SNHG1-201ENST00000535076 MRVI1Q9Y6F6 885 aa6.46□□□□□ -1.38
SNHG1-201ENST00000535076 A0A1W2PRU2 124 aa6.45□□□□□ -1.38
SNHG1-201ENST00000535076 HMGB1P1B2RPK0 211 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-201ENST00000535076 ATP5J2-PTCD1G3V325 749 aa6.45□□□□□ -1.38
SNHG1-201ENST00000535076 CCER2I3L3R5 266 aa6.45□□□□□ -1.38
SNHG1-201ENST00000535076 MFAP1P55081 439 aaKnown RBP6.45□□□□□ -1.38
SNHG1-201ENST00000535076 CREBRFQ8IUR6 639 aa6.45□□□□□ -1.38
SNHG1-201ENST00000535076 CUEDC1Q9NWM3 386 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-201ENST00000535076 ZBED9Q6R2W3 1325 aa6.45□□□□□ -1.38
SNHG1-201ENST00000535076 KIF16BQ96L93 1317 aa6.45□□□□□ -1.38
SNHG1-201ENST00000535076 NINLQ9Y2I6 1382 aa6.44□□□□□ -1.38
SNHG1-201ENST00000535076 OFD1O75665 1012 aa6.44□□□□□ -1.38
SNHG1-201ENST00000535076 RHOQP17081 205 aa6.44□□□□□ -1.38
SNHG1-201ENST00000535076 RNF144AP50876 292 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-201ENST00000535076 MCCD1P59942 119 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-201ENST00000535076 UVSSAQ2YD98 709 aa6.44□□□□□ -1.38
SNHG1-201ENST00000535076 RNF20Q5VTR2 975 aa6.44□□□□□ -1.38
SNHG1-201ENST00000535076 FAM9BQ8IZU0 186 aa6.44□□□□□ -1.38
SNHG1-201ENST00000535076 ARHGEF10LQ9HCE6 1279 aa6.44□□□□□ -1.38
SNHG1-201ENST00000535076 RAB6BQ9NRW1 208 aa6.44□□□□□ -1.38
SNHG1-201ENST00000535076 SMC4Q9NTJ3 1288 aa6.44□□□□□ -1.38
SNHG1-201ENST00000535076 CHIC2Q9UKJ5 165 aa6.44□□□□□ -1.38
SNHG1-201ENST00000535076 KIF3AQ9Y496 699 aa6.44□□□□□ -1.38
SNHG1-201ENST00000535076 NCAPD3P42695 1498 aa6.43□□□□□ -1.38
SNHG1-201ENST00000535076 MEN1O00255 615 aa6.43□□□□□ -1.38
SNHG1-201ENST00000535076 PIK3CDO00329 1044 aa6.43□□□□□ -1.38
SNHG1-201ENST00000535076 IL2RAP01589 272 aa6.43□□□□□ -1.38
SNHG1-201ENST00000535076 RBM25P49756 843 aaKnown RBP6.43□□□□□ -1.38
SNHG1-201ENST00000535076 DONSONQ9NYP3 566 aa6.43□□□□□ -1.38
SNHG1-201ENST00000535076 KNSTRNQ9Y448 316 aa6.43□□□□□ -1.38
SNHG1-201ENST00000535076 PHLDB1Q86UU1 1377 aa6.43□□□□□ -1.38
SNHG1-201ENST00000535076 UNC13AQ9UPW8 1703 aa6.42□□□□□ -1.38
SNHG1-201ENST00000535076 ZRANB2O95218 330 aaKnown RBP eCLIP6.42□□□□□ -1.388e-10■■■■■ 33.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms