RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 WBP1LQ9NX94 342 aa14.95□□□□□ -0.02
TNC-209ENST00000534839 USP54Q70EL1 1684 aa14.94□□□□□ -0.02
TNC-209ENST00000534839 CPSF1Q10570 1443 aaKnown RBP14.94□□□□□ -0.02
TNC-209ENST00000534839 PLEKHG3A1L390 1219 aa14.94□□□□□ -0.02
TNC-209ENST00000534839 ERBB3P21860 1342 aa14.93□□□□□ -0.02
TNC-209ENST00000534839 KAT6BQ8WYB5 2073 aa14.93□□□□□ -0.02
TNC-209ENST00000534839 A0A0G2JLW4 131 aa14.93□□□□□ -0.02
TNC-209ENST00000534839 FLAD1Q8NFF5 587 aa14.93□□□□□ -0.02
TNC-209ENST00000534839 SYTL4Q96C24 671 aaPredicted RBP14.93□□□□□ -0.02
TNC-209ENST00000534839 RNF181Q9P0P0 153 aa14.93□□□□□ -0.02
TNC-209ENST00000534839 CNTNAP1P78357 1384 aa14.93□□□□□ -0.02
TNC-209ENST00000534839 N4BP2Q86UW6 1770 aaPredicted RBP14.93□□□□□ -0.02
TNC-209ENST00000534839 FCHSD2O94868 740 aa14.92□□□□□ -0.02
TNC-209ENST00000534839 ARHGEF25Q86VW2 580 aa14.92□□□□□ -0.02
TNC-209ENST00000534839 NSD2O96028 1365 aa14.92□□□□□ -0.02
TNC-209ENST00000534839 ADGRB1O14514 1584 aa14.92□□□□□ -0.02
TNC-209ENST00000534839 RIMBP2O15034 1052 aa14.91□□□□□ -0.02
TNC-209ENST00000534839 HOXB1P14653 301 aaPredicted RBP14.91□□□□□ -0.02
TNC-209ENST00000534839 IL2RBP14784 551 aa14.91□□□□□ -0.02
TNC-209ENST00000534839 PRIM1P49642 420 aaKnown RBP14.91□□□□□ -0.02
TNC-209ENST00000534839 MARVELD3Q96A59 401 aa14.91□□□□□ -0.02
TNC-209ENST00000534839 ZSWIM6Q9HCJ5 1215 aa14.91□□□□□ -0.02
TNC-209ENST00000534839 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
TNC-209ENST00000534839 VEGFAP15692 232 aaPredicted RBP14.9□□□□□ -0.02
TNC-209ENST00000534839 AMIGO3Q86WK7 504 aa14.9□□□□□ -0.02
TNC-209ENST00000534839 KCNV2Q8TDN2 545 aa14.9□□□□□ -0.02
TNC-209ENST00000534839 CDK19Q9BWU1 502 aa14.9□□□□□ -0.02
TNC-209ENST00000534839 VEGFBP49765 207 aa14.89□□□□□ -0.03
TNC-209ENST00000534839 TGFB2P61812 414 aa14.89□□□□□ -0.03
TNC-209ENST00000534839 DPYSL4O14531 572 aa14.88□□□□□ -0.03
TNC-209ENST00000534839 NUDT7P0C024 238 aa14.88□□□□□ -0.03
TNC-209ENST00000534839 DDX54Q8TDD1 881 aaKnown RBP14.88□□□□□ -0.03
TNC-209ENST00000534839 C5P01031 1676 aa14.87□□□□□ -0.03
TNC-209ENST00000534839 ANKRD36BQ8N2N9 1353 aa14.87□□□□□ -0.03
TNC-209ENST00000534839 PRPF38BQ5VTL8 546 aaKnown RBP14.87□□□□□ -0.03
TNC-209ENST00000534839 KIF13BQ9NQT8 1826 aa14.87□□□□□ -0.03
TNC-209ENST00000534839 DPEP1P16444 411 aa14.86□□□□□ -0.03
TNC-209ENST00000534839 VIRMAQ69YN4 1812 aaKnown RBP14.85□□□□□ -0.03
TNC-209ENST00000534839 DOT1LQ8TEK3 1739 aa14.85□□□□□ -0.03
TNC-209ENST00000534839 TOGARAM1Q9Y4F4 1720 aa14.85□□□□□ -0.03
TNC-209ENST00000534839 PHF14O94880 888 aa14.84□□□□□ -0.03
TNC-209ENST00000534839 MAP3K9P80192 1104 aa14.84□□□□□ -0.03
TNC-209ENST00000534839 NLRP2Q9NX02 1062 aa14.84□□□□□ -0.03
TNC-209ENST00000534839 GLTPD2A6NH11 291 aa14.83□□□□□ -0.04
TNC-209ENST00000534839 USP47Q96K76 1375 aa14.83□□□□□ -0.04
TNC-209ENST00000534839 BRCA1P38398 1863 aaKnown RBP14.82□□□□□ -0.04
TNC-209ENST00000534839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.82□□□□□ -0.04
TNC-209ENST00000534839 POTECB2RU33 542 aa14.82□□□□□ -0.04
TNC-209ENST00000534839 TBC1D12O60347 775 aa14.82□□□□□ -0.04
TNC-209ENST00000534839 ARFGEF1Q9Y6D6 1849 aa14.82□□□□□ -0.04
TNC-209ENST00000534839 PDE4DIPQ5VU43 2346 aa14.82□□□□□ -0.04
TNC-209ENST00000534839 KCNA3P22001 575 aa14.81□□□□□ -0.04
TNC-209ENST00000534839 DCAF5Q96JK2 942 aa14.81□□□□□ -0.04
TNC-209ENST00000534839 MMP10P09238 476 aa14.8□□□□□ -0.04
TNC-209ENST00000534839 AK7Q96M32 723 aa14.8□□□□□ -0.04
TNC-209ENST00000534839 ARIH1Q9Y4X5 557 aaPredicted RBP14.8□□□□□ -0.04
TNC-209ENST00000534839 TAF1LQ8IZX4 1826 aa14.8□□□□□ -0.04
TNC-209ENST00000534839 SBF1O95248 1867 aa14.8□□□□□ -0.04
TNC-209ENST00000534839 POTEB3A0JP26 581 aa14.79□□□□□ -0.04
TNC-209ENST00000534839 EVI5O60447 810 aa14.79□□□□□ -0.04
TNC-209ENST00000534839 C4BP0C0L5 1744 aa14.79□□□□□ -0.04
TNC-209ENST00000534839 POTEBQ6S5H4 581 aa14.79□□□□□ -0.04
TNC-209ENST00000534839 KCNH5Q8NCM2 988 aa14.79□□□□□ -0.04
TNC-209ENST00000534839 MCOLN1Q9GZU1 580 aa14.79□□□□□ -0.04
TNC-209ENST00000534839 ZC3H4Q9UPT8 1303 aaKnown RBP14.78□□□□□ -0.04
TNC-209ENST00000534839 EMP3P54852 163 aa14.78□□□□□ -0.04
TNC-209ENST00000534839 UBR3Q6ZT12 1888 aa14.78□□□□□ -0.04
TNC-209ENST00000534839 MAP2K1Q02750 393 aaPredicted RBP14.77□□□□□ -0.05
TNC-209ENST00000534839 LHX6Q9UPM6 363 aa14.77□□□□□ -0.05
TNC-209ENST00000534839 ARHGEF1Q92888 912 aaKnown RBP14.76□□□□□ -0.05
TNC-209ENST00000534839 NFAT5O94916 1531 aa14.76□□□□□ -0.05
TNC-209ENST00000534839 PASKQ96RG2 1323 aa14.75□□□□□ -0.05
TNC-209ENST00000534839 RASSF7Q02833 373 aa14.75□□□□□ -0.05
TNC-209ENST00000534839 PIM2Q9P1W9 311 aa14.75□□□□□ -0.05
TNC-209ENST00000534839 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
TNC-209ENST00000534839 FAM205CA6NFA0 338 aa14.74□□□□□ -0.05
TNC-209ENST00000534839 SSFA2P28290 1259 aa14.74□□□□□ -0.05
TNC-209ENST00000534839 DALRD3Q5D0E6 543 aaKnown RBP14.74□□□□□ -0.05
TNC-209ENST00000534839 ZNF316A6NFI3 1004 aaPredicted RBP14.73□□□□□ -0.05
TNC-209ENST00000534839 POTEGQ6S5H5 508 aa14.73□□□□□ -0.05
TNC-209ENST00000534839 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
TNC-209ENST00000534839 POTEMA6NI47 508 aa14.72□□□□□ -0.05
TNC-209ENST00000534839 TMEM88BA6NKF7 163 aa14.72□□□□□ -0.05
TNC-209ENST00000534839 HMGB2P26583 209 aaKnown RBP14.72□□□□□ -0.05
TNC-209ENST00000534839 PDIA6Q15084 440 aa14.72□□□□□ -0.05
TNC-209ENST00000534839 ANKRD24Q8TF21 1146 aa14.72□□□□□ -0.05
TNC-209ENST00000534839 CCDC87Q9NVE4 849 aa14.72□□□□□ -0.05
TNC-209ENST00000534839 NSD3Q9BZ95 1437 aa14.72□□□□□ -0.05
TNC-209ENST00000534839 WDR33Q9C0J8 1336 aaKnown RBP14.71□□□□□ -0.05
TNC-209ENST00000534839 SOX10P56693 466 aa14.71□□□□□ -0.05
TNC-209ENST00000534839 TSKSQ9UJT2 592 aa14.71□□□□□ -0.05
TNC-209ENST00000534839 RASSF10A6NK89 507 aa14.7□□□□□ -0.06
TNC-209ENST00000534839 DLL1O00548 723 aa14.7□□□□□ -0.06
TNC-209ENST00000534839 DEFB115Q30KQ5 88 aa14.7□□□□□ -0.06
TNC-209ENST00000534839 LMNB1P20700 586 aa14.69□□□□□ -0.06
TNC-209ENST00000534839 VARS2Q5ST30 1063 aaKnown RBP14.69□□□□□ -0.06
TNC-209ENST00000534839 HS3ST6Q96QI5 342 aa14.69□□□□□ -0.06
TNC-209ENST00000534839 CABP1Q9NZU7 370 aa14.69□□□□□ -0.06
TNC-209ENST00000534839 TIAM2Q8IVF5 1701 aa14.69□□□□□ -0.06
TNC-209ENST00000534839 SRPK2P78362 688 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms