RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 AKAP4Q5JQC9 854 aa15.72■□□□□ 0.11
CTNND1-238ENST00000534647 C4AP0C0L4 1744 aa15.71■□□□□ 0.11
CTNND1-238ENST00000534647 USP42Q9H9J4 1324 aaKnown RBP15.71■□□□□ 0.11
CTNND1-238ENST00000534647 INTS5Q6P9B9 1019 aaKnown RBP15.71■□□□□ 0.11
CTNND1-238ENST00000534647 MYH14Q7Z406 1995 aaKnown RBP15.71■□□□□ 0.1
CTNND1-238ENST00000534647 TM4SF1P30408 202 aa15.7■□□□□ 0.1
CTNND1-238ENST00000534647 IFFO2Q5TF58 517 aa15.7■□□□□ 0.1
CTNND1-238ENST00000534647 ARHGAP27Q6ZUM4 889 aa15.7■□□□□ 0.1
CTNND1-238ENST00000534647 SLC52A2Q9HAB3 445 aa15.7■□□□□ 0.1
CTNND1-238ENST00000534647 PIM2Q9P1W9 311 aa15.7■□□□□ 0.1
CTNND1-238ENST00000534647 TOMM70O94826 608 aa15.69■□□□□ 0.1
CTNND1-238ENST00000534647 FCHSD2O94868 740 aa15.69■□□□□ 0.1
CTNND1-238ENST00000534647 N4BP2Q86UW6 1770 aaPredicted RBP15.68■□□□□ 0.1
CTNND1-238ENST00000534647 DDR1Q08345 913 aa15.68■□□□□ 0.1
CTNND1-238ENST00000534647 LGR6Q9HBX8 967 aa15.68■□□□□ 0.1
CTNND1-238ENST00000534647 SRP68Q9UHB9 627 aaKnown RBP15.68■□□□□ 0.1
CTNND1-238ENST00000534647 PER1O15534 1290 aaPredicted RBP15.67■□□□□ 0.1
CTNND1-238ENST00000534647 RNMTO43148 476 aaKnown RBP15.67■□□□□ 0.1
CTNND1-238ENST00000534647 TMEM132AQ24JP5 1023 aa15.67■□□□□ 0.1
CTNND1-238ENST00000534647 POLRMTO00411 1230 aaKnown RBP15.66■□□□□ 0.1
CTNND1-238ENST00000534647 CYP19A1P11511 503 aaPredicted RBP15.66■□□□□ 0.1
CTNND1-238ENST00000534647 APLP1P51693 650 aa15.66■□□□□ 0.1
CTNND1-238ENST00000534647 DALRD3Q5D0E6 543 aaKnown RBP15.66■□□□□ 0.1
CTNND1-238ENST00000534647 DNAJC10Q8IXB1 793 aa15.66■□□□□ 0.1
CTNND1-238ENST00000534647 SOS1Q07889 1333 aaPredicted RBP15.66■□□□□ 0.1
CTNND1-238ENST00000534647 TJP1Q07157 1748 aa15.65■□□□□ 0.1
CTNND1-238ENST00000534647 MRC1P22897 1456 aa15.65■□□□□ 0.1
CTNND1-238ENST00000534647 SCN11AQ9UI33 1791 aa15.65■□□□□ 0.1
CTNND1-238ENST00000534647 ZPR1O75312 459 aa15.65■□□□□ 0.1
CTNND1-238ENST00000534647 C9orf131Q5VYM1 1079 aa15.65■□□□□ 0.1
CTNND1-238ENST00000534647 NARFQ9UHQ1 456 aa15.65■□□□□ 0.1
CTNND1-238ENST00000534647 BRCA1P38398 1863 aaKnown RBP15.65■□□□□ 0.1
CTNND1-238ENST00000534647 ADAMTS7Q9UKP4 1686 aa15.64■□□□□ 0.09
CTNND1-238ENST00000534647 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
CTNND1-238ENST00000534647 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
CTNND1-238ENST00000534647 KIF7Q2M1P5 1343 aa15.64■□□□□ 0.09
CTNND1-238ENST00000534647 MTHFSDQ2M296 383 aaKnown RBP15.63■□□□□ 0.09
CTNND1-238ENST00000534647 USPL1Q5W0Q7 1092 aa15.63■□□□□ 0.09
CTNND1-238ENST00000534647 DNAJC5GQ8N7S2 189 aa15.63■□□□□ 0.09
CTNND1-238ENST00000534647 RBM46Q8TBY0 533 aaKnown RBP15.63■□□□□ 0.09
CTNND1-238ENST00000534647 NMRK2Q9NPI5 230 aa15.63■□□□□ 0.09
CTNND1-238ENST00000534647 ARFGEF1Q9Y6D6 1849 aa15.62■□□□□ 0.09
CTNND1-238ENST00000534647 DIAPH1O60610 1272 aaKnown RBP15.62■□□□□ 0.09
CTNND1-238ENST00000534647 SLC39A6Q13433 755 aa15.62■□□□□ 0.09
CTNND1-238ENST00000534647 SPOCK2Q92563 424 aa15.62■□□□□ 0.09
CTNND1-238ENST00000534647 HMOX1P09601 288 aa15.61■□□□□ 0.09
CTNND1-238ENST00000534647 CHRNA5P30532 468 aa15.61■□□□□ 0.09
CTNND1-238ENST00000534647 NFIXQ14938 502 aa15.61■□□□□ 0.09
CTNND1-238ENST00000534647 KDM2BQ8NHM5 1336 aa15.61■□□□□ 0.09
CTNND1-238ENST00000534647 NPC1L1Q9UHC9 1359 aa15.61■□□□□ 0.09
CTNND1-238ENST00000534647 KCPQ6ZWJ8 1503 aa15.6■□□□□ 0.09
CTNND1-238ENST00000534647 FSTL1Q12841 308 aa15.6■□□□□ 0.09
CTNND1-238ENST00000534647 BCL2L12Q9HB09 334 aa15.6■□□□□ 0.09
CTNND1-238ENST00000534647 ZC3H4Q9UPT8 1303 aaKnown RBP15.6■□□□□ 0.09
CTNND1-238ENST00000534647 COL15A1P39059 1388 aa15.6■□□□□ 0.09
CTNND1-238ENST00000534647 RNF181Q9P0P0 153 aa15.59■□□□□ 0.09
CTNND1-238ENST00000534647 ZBTB1Q9Y2K1 713 aa15.59■□□□□ 0.09
CTNND1-238ENST00000534647 STARD3NLO95772 234 aa15.58■□□□□ 0.08
CTNND1-238ENST00000534647 SERPINB2P05120 415 aa15.58■□□□□ 0.08
CTNND1-238ENST00000534647 EIF5P55010 431 aaKnown RBP15.58■□□□□ 0.08
CTNND1-238ENST00000534647 TEX13AQ9BXU3 409 aaPredicted RBP15.58■□□□□ 0.08
CTNND1-238ENST00000534647 A0A087WZG4 1122 aa15.57■□□□□ 0.08
CTNND1-238ENST00000534647 C16orf71Q8IYS4 520 aaPredicted RBP15.57■□□□□ 0.08
CTNND1-238ENST00000534647 NRXN2Q9P2S2 1712 aa15.57■□□□□ 0.08
CTNND1-238ENST00000534647 RGL2O15211 777 aa15.56■□□□□ 0.08
CTNND1-238ENST00000534647 CC2D1BQ5T0F9 858 aaKnown RBP15.56■□□□□ 0.08
CTNND1-238ENST00000534647 TTC5Q8N0Z6 440 aa15.56■□□□□ 0.08
CTNND1-238ENST00000534647 TTLL6Q8N841 843 aa15.56■□□□□ 0.08
CTNND1-238ENST00000534647 IL17REQ8NFR9 667 aa15.56■□□□□ 0.08
CTNND1-238ENST00000534647 PDZRN3Q9UPQ7 1066 aa15.56■□□□□ 0.08
CTNND1-238ENST00000534647 GNAT3A8MTJ3 354 aa15.55■□□□□ 0.08
CTNND1-238ENST00000534647 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
CTNND1-238ENST00000534647 GAS2L2Q8NHY3 880 aa15.55■□□□□ 0.08
CTNND1-238ENST00000534647 LMNB1P20700 586 aa15.54■□□□□ 0.08
CTNND1-238ENST00000534647 CANXP27824 592 aaKnown RBP15.54■□□□□ 0.08
CTNND1-238ENST00000534647 ZNF496Q96IT1 587 aaPredicted RBP15.54■□□□□ 0.08
CTNND1-238ENST00000534647 RRAGCQ9HB90 399 aa15.54■□□□□ 0.08
CTNND1-238ENST00000534647 UBR2Q8IWV8 1755 aa15.54■□□□□ 0.08
CTNND1-238ENST00000534647 COL3A1P02461 1466 aaPredicted RBP15.53■□□□□ 0.08
CTNND1-238ENST00000534647 HEG1Q9ULI3 1381 aa15.53■□□□□ 0.08
CTNND1-238ENST00000534647 H0YIN7 160 aa15.53■□□□□ 0.08
CTNND1-238ENST00000534647 TEFQ10587 303 aa15.53■□□□□ 0.08
CTNND1-238ENST00000534647 CEMIPQ8WUJ3 1361 aa15.52■□□□□ 0.08
CTNND1-238ENST00000534647 GLTPD2A6NH11 291 aa15.52■□□□□ 0.08
CTNND1-238ENST00000534647 IL6STP40189 918 aaPredicted RBP15.52■□□□□ 0.08
CTNND1-238ENST00000534647 C2CD5Q86YS7 1000 aa15.52■□□□□ 0.08
CTNND1-238ENST00000534647 JMYQ8N9B5 988 aa15.52■□□□□ 0.08
CTNND1-238ENST00000534647 BRIP1Q9BX63 1249 aa15.52■□□□□ 0.08
CTNND1-238ENST00000534647 SBF1O95248 1867 aa15.52■□□□□ 0.07
CTNND1-238ENST00000534647 PRELPP51888 382 aa15.51■□□□□ 0.07
CTNND1-238ENST00000534647 SMC1BQ8NDV3 1235 aa15.51■□□□□ 0.07
CTNND1-238ENST00000534647 KLRG1Q96E93 195 aa15.51■□□□□ 0.07
CTNND1-238ENST00000534647 AFDNP55196 1824 aaKnown RBP15.51■□□□□ 0.07
CTNND1-238ENST00000534647 U2SURPO15042 1029 aaKnown RBP15.5■□□□□ 0.07
CTNND1-238ENST00000534647 VEGFAP15692 232 aaPredicted RBP15.5■□□□□ 0.07
CTNND1-238ENST00000534647 PDE6BP35913 854 aa15.5■□□□□ 0.07
CTNND1-238ENST00000534647 RASSF7Q02833 373 aa15.5■□□□□ 0.07
CTNND1-238ENST00000534647 TBC1D9BQ66K14 1250 aa15.5■□□□□ 0.07
CTNND1-238ENST00000534647 FMNL2Q96PY5 1086 aa15.5■□□□□ 0.07
CTNND1-238ENST00000534647 DLEC1Q9Y238 1755 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms