RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 APLP1P51693 650 aa18.77■□□□□ 0.6
SF3B2-215ENST00000534307 TEFQ10587 303 aa18.77■□□□□ 0.6
SF3B2-215ENST00000534307 ZNF790Q6PG37 636 aa18.77■□□□□ 0.6
SF3B2-215ENST00000534307 DNAJC5GQ8N7S2 189 aa18.77■□□□□ 0.6
SF3B2-215ENST00000534307 ZNF496Q96IT1 587 aaPredicted RBP18.76■□□□□ 0.59
SF3B2-215ENST00000534307 C10orf71Q711Q0 1435 aa18.75■□□□□ 0.59
SF3B2-215ENST00000534307 SRP68Q9UHB9 627 aaKnown RBP18.75■□□□□ 0.59
SF3B2-215ENST00000534307 HEG1Q9ULI3 1381 aa18.74■□□□□ 0.59
SF3B2-215ENST00000534307 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
SF3B2-215ENST00000534307 RALBP1Q15311 655 aa18.74■□□□□ 0.59
SF3B2-215ENST00000534307 TTC5Q8N0Z6 440 aa18.74■□□□□ 0.59
SF3B2-215ENST00000534307 PLEKHF1Q96S99 279 aa18.74■□□□□ 0.59
SF3B2-215ENST00000534307 ZBTB1Q9Y2K1 713 aa18.74■□□□□ 0.59
SF3B2-215ENST00000534307 ARFGEF1Q9Y6D6 1849 aa18.74■□□□□ 0.59
SF3B2-215ENST00000534307 PXDNLA1KZ92 1463 aa18.73■□□□□ 0.59
SF3B2-215ENST00000534307 DLG5Q8TDM6 1919 aa18.72■□□□□ 0.59
SF3B2-215ENST00000534307 COL15A1P39059 1388 aa18.72■□□□□ 0.59
SF3B2-215ENST00000534307 HTATSF1O43719 755 aaKnown RBP18.72■□□□□ 0.59
SF3B2-215ENST00000534307 FKBP8Q14318 412 aa18.72■□□□□ 0.59
SF3B2-215ENST00000534307 MCM10Q7L590 875 aa18.72■□□□□ 0.59
SF3B2-215ENST00000534307 BTBD11A6QL63 1104 aa18.71■□□□□ 0.59
SF3B2-215ENST00000534307 KCNQ3O43525 872 aa18.71■□□□□ 0.59
SF3B2-215ENST00000534307 TOMM70O94826 608 aa18.7■□□□□ 0.58
SF3B2-215ENST00000534307 STARD3NLO95772 234 aa18.7■□□□□ 0.58
SF3B2-215ENST00000534307 DDR1Q08345 913 aa18.7■□□□□ 0.58
SF3B2-215ENST00000534307 TM4SF1P30408 202 aa18.69■□□□□ 0.58
SF3B2-215ENST00000534307 EIF5P55010 431 aaKnown RBP18.69■□□□□ 0.58
SF3B2-215ENST00000534307 DCTN1Q14203 1278 aa18.69■□□□□ 0.58
SF3B2-215ENST00000534307 USPL1Q5W0Q7 1092 aa18.69■□□□□ 0.58
SF3B2-215ENST00000534307 RTF1Q92541 710 aaKnown RBP18.69■□□□□ 0.58
SF3B2-215ENST00000534307 FMNL2Q96PY5 1086 aa18.69■□□□□ 0.58
SF3B2-215ENST00000534307 TEX13AQ9BXU3 409 aaPredicted RBP18.69■□□□□ 0.58
SF3B2-215ENST00000534307 NARFQ9UHQ1 456 aa18.69■□□□□ 0.58
SF3B2-215ENST00000534307 PARP3Q9Y6F1 533 aa18.69■□□□□ 0.58
SF3B2-215ENST00000534307 TGFB2P61812 414 aa18.68■□□□□ 0.58
SF3B2-215ENST00000534307 BCL2L12Q9HB09 334 aa18.68■□□□□ 0.58
SF3B2-215ENST00000534307 SCN7AQ01118 1682 aa18.67■□□□□ 0.58
SF3B2-215ENST00000534307 NRXN2Q9P2S2 1712 aa18.67■□□□□ 0.58
SF3B2-215ENST00000534307 POLRMTO00411 1230 aaKnown RBP18.67■□□□□ 0.58
SF3B2-215ENST00000534307 ZPR1O75312 459 aa18.67■□□□□ 0.58
SF3B2-215ENST00000534307 MYBBP1AQ9BQG0 1328 aaKnown RBP18.67■□□□□ 0.58
SF3B2-215ENST00000534307 SBF1O95248 1867 aa18.67■□□□□ 0.58
SF3B2-215ENST00000534307 CANXP27824 592 aaKnown RBP18.66■□□□□ 0.58
SF3B2-215ENST00000534307 COL13A1Q5TAT6 717 aaPredicted RBP18.66■□□□□ 0.58
SF3B2-215ENST00000534307 NMRK2Q9NPI5 230 aa18.66■□□□□ 0.58
SF3B2-215ENST00000534307 TNRC6CQ9HCJ0 1690 aaKnown RBP18.66■□□□□ 0.58
SF3B2-215ENST00000534307 KDM3BQ7LBC6 1761 aa18.65■□□□□ 0.58
SF3B2-215ENST00000534307 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
SF3B2-215ENST00000534307 AFDNP55196 1824 aaKnown RBP18.65■□□□□ 0.58
SF3B2-215ENST00000534307 HTRA3P83110 453 aa18.64■□□□□ 0.57
SF3B2-215ENST00000534307 NFIXQ14938 502 aa18.64■□□□□ 0.57
SF3B2-215ENST00000534307 TAF7Q15545 349 aaPredicted RBP18.64■□□□□ 0.57
SF3B2-215ENST00000534307 A0A0G2JLW4 131 aa18.63■□□□□ 0.57
SF3B2-215ENST00000534307 PRAMEF22A3QJZ6 481 aa18.63■□□□□ 0.57
SF3B2-215ENST00000534307 A1BGP04217 495 aa18.63■□□□□ 0.57
SF3B2-215ENST00000534307 NEFMP07197 916 aa18.63■□□□□ 0.57
SF3B2-215ENST00000534307 KCNA3P22001 575 aa18.63■□□□□ 0.57
SF3B2-215ENST00000534307 IL6STP40189 918 aaPredicted RBP18.63■□□□□ 0.57
SF3B2-215ENST00000534307 PNNQ9H307 717 aaKnown RBP18.63■□□□□ 0.57
SF3B2-215ENST00000534307 USP16Q9Y5T5 823 aa18.63■□□□□ 0.57
SF3B2-215ENST00000534307 A0A087WZG4 1122 aa18.62■□□□□ 0.57
SF3B2-215ENST00000534307 DPEP1P16444 411 aa18.62■□□□□ 0.57
SF3B2-215ENST00000534307 JMYQ8N9B5 988 aa18.62■□□□□ 0.57
SF3B2-215ENST00000534307 KLRG1Q96E93 195 aa18.62■□□□□ 0.57
SF3B2-215ENST00000534307 BCORQ6W2J9 1755 aa18.62■□□□□ 0.57
SF3B2-215ENST00000534307 LAMB4A4D0S4 1761 aa18.61■□□□□ 0.57
SF3B2-215ENST00000534307 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
SF3B2-215ENST00000534307 SNRPA1P09661 255 aaKnown RBP18.61■□□□□ 0.57
SF3B2-215ENST00000534307 RBM46Q8TBY0 533 aaKnown RBP18.61■□□□□ 0.57
SF3B2-215ENST00000534307 CAPN15O75808 1086 aa18.6■□□□□ 0.57
SF3B2-215ENST00000534307 THUMPD2Q9BTF0 503 aaKnown RBP18.6■□□□□ 0.57
SF3B2-215ENST00000534307 PRKRIP1Q9H875 184 aaPredicted RBP18.6■□□□□ 0.57
SF3B2-215ENST00000534307 MIS18AQ9NYP9 233 aa18.6■□□□□ 0.57
SF3B2-215ENST00000534307 BCS1LQ9Y276 419 aa18.6■□□□□ 0.57
SF3B2-215ENST00000534307 CAMTA2O94983 1202 aa18.58■□□□□ 0.56
SF3B2-215ENST00000534307 PNISRQ8TF01 805 aaKnown RBP18.58■□□□□ 0.56
SF3B2-215ENST00000534307 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.56
SF3B2-215ENST00000534307 DLEC1Q9Y238 1755 aa18.58■□□□□ 0.56
SF3B2-215ENST00000534307 NBPF26B4DH59 902 aa18.57■□□□□ 0.56
SF3B2-215ENST00000534307 SERPINB2P05120 415 aa18.57■□□□□ 0.56
SF3B2-215ENST00000534307 ZEB1P37275 1124 aaPredicted RBP18.57■□□□□ 0.56
SF3B2-215ENST00000534307 PIP4K2AP48426 406 aaPredicted RBP18.57■□□□□ 0.56
SF3B2-215ENST00000534307 TBC1D9BQ66K14 1250 aa18.57■□□□□ 0.56
SF3B2-215ENST00000534307 NBPF10Q6P3W6 841 aaKnown RBP18.57■□□□□ 0.56
SF3B2-215ENST00000534307 NBPF15Q8N660 670 aa18.57■□□□□ 0.56
SF3B2-215ENST00000534307 TMPOP42166 694 aaKnown RBP18.56■□□□□ 0.56
SF3B2-215ENST00000534307 ARHGAP27Q6ZUM4 889 aa18.56■□□□□ 0.56
SF3B2-215ENST00000534307 ZNF330Q9Y3S2 320 aaPredicted RBP18.56■□□□□ 0.56
SF3B2-215ENST00000534307 CARMIL3Q8ND23 1372 aa18.55■□□□□ 0.56
SF3B2-215ENST00000534307 CCDC88AQ3V6T2 1871 aa18.55■□□□□ 0.56
SF3B2-215ENST00000534307 ANKRD31Q8N7Z5 1873 aa18.55■□□□□ 0.56
SF3B2-215ENST00000534307 CHRNA5P30532 468 aa18.55■□□□□ 0.56
SF3B2-215ENST00000534307 EIF4A1P60842 406 aaKnown RBP18.55■□□□□ 0.56
SF3B2-215ENST00000534307 PRELPP51888 382 aa18.54■□□□□ 0.56
SF3B2-215ENST00000534307 RIPK4P57078 832 aa18.54■□□□□ 0.56
SF3B2-215ENST00000534307 DZIP3Q86Y13 1208 aaKnown RBP18.54■□□□□ 0.56
SF3B2-215ENST00000534307 TNS4Q8IZW8 715 aa18.54■□□□□ 0.56
SF3B2-215ENST00000534307 PIM2Q9P1W9 311 aa18.54■□□□□ 0.56
SF3B2-215ENST00000534307 FSTL1Q12841 308 aa18.53■□□□□ 0.56
SF3B2-215ENST00000534307 C9orf131Q5VYM1 1079 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms