RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 ADCY9O60503 1353 aa16.26■□□□□ 0.19
CHRDL2-209ENST00000534276 PHACTR3Q96KR7 559 aa16.26■□□□□ 0.19
CHRDL2-209ENST00000534276 KIF13BQ9NQT8 1826 aa16.25■□□□□ 0.19
CHRDL2-209ENST00000534276 ZPR1O75312 459 aa16.25■□□□□ 0.19
CHRDL2-209ENST00000534276 PRKAR2BP31323 418 aa16.25■□□□□ 0.19
CHRDL2-209ENST00000534276 TEFQ10587 303 aa16.25■□□□□ 0.19
CHRDL2-209ENST00000534276 TTC5Q8N0Z6 440 aa16.25■□□□□ 0.19
CHRDL2-209ENST00000534276 RSPH6AQ9H0K4 717 aa16.25■□□□□ 0.19
CHRDL2-209ENST00000534276 BCS1LQ9Y276 419 aa16.25■□□□□ 0.19
CHRDL2-209ENST00000534276 ZBTB1Q9Y2K1 713 aa16.25■□□□□ 0.19
CHRDL2-209ENST00000534276 TM4SF1P30408 202 aa16.24■□□□□ 0.19
CHRDL2-209ENST00000534276 USPL1Q5W0Q7 1092 aa16.24■□□□□ 0.19
CHRDL2-209ENST00000534276 ZNF496Q96IT1 587 aaPredicted RBP16.24■□□□□ 0.19
CHRDL2-209ENST00000534276 NUDCQ9Y266 331 aa16.24■□□□□ 0.19
CHRDL2-209ENST00000534276 ZNF790Q6PG37 636 aa16.23■□□□□ 0.19
CHRDL2-209ENST00000534276 NARFQ9UHQ1 456 aa16.23■□□□□ 0.19
CHRDL2-209ENST00000534276 KIAA1551Q9HCM1 1747 aa16.23■□□□□ 0.19
CHRDL2-209ENST00000534276 POLRMTO00411 1230 aaKnown RBP16.22■□□□□ 0.19
CHRDL2-209ENST00000534276 STARD3NLO95772 234 aa16.22■□□□□ 0.19
CHRDL2-209ENST00000534276 KCNA3P22001 575 aa16.22■□□□□ 0.19
CHRDL2-209ENST00000534276 GPBP1L1Q9HC44 474 aaPredicted RBP16.22■□□□□ 0.19
CHRDL2-209ENST00000534276 COL15A1P39059 1388 aa16.22■□□□□ 0.19
CHRDL2-209ENST00000534276 CEMIPQ8WUJ3 1361 aa16.22■□□□□ 0.19
CHRDL2-209ENST00000534276 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
CHRDL2-209ENST00000534276 FCHSD2O94868 740 aa16.21■□□□□ 0.19
CHRDL2-209ENST00000534276 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
CHRDL2-209ENST00000534276 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
CHRDL2-209ENST00000534276 HNRNPUQ00839 825 aaKnown RBP eCLIP16.21■□□□□ 0.19
CHRDL2-209ENST00000534276 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
CHRDL2-209ENST00000534276 NFIXQ14938 502 aa16.2■□□□□ 0.18
CHRDL2-209ENST00000534276 BCL2L12Q9HB09 334 aa16.2■□□□□ 0.18
CHRDL2-209ENST00000534276 HEG1Q9ULI3 1381 aa16.2■□□□□ 0.18
CHRDL2-209ENST00000534276 N4BP2Q86UW6 1770 aaPredicted RBP16.2■□□□□ 0.18
CHRDL2-209ENST00000534276 VIRMAQ69YN4 1812 aaKnown RBP16.2■□□□□ 0.18
CHRDL2-209ENST00000534276 ZBED9Q6R2W3 1325 aa16.19■□□□□ 0.18
CHRDL2-209ENST00000534276 EIF5P55010 431 aaKnown RBP16.19■□□□□ 0.18
CHRDL2-209ENST00000534276 ARHGAP27Q6ZUM4 889 aa16.19■□□□□ 0.18
CHRDL2-209ENST00000534276 ZNF526Q8TF50 670 aaPredicted RBP16.19■□□□□ 0.18
CHRDL2-209ENST00000534276 TEX13AQ9BXU3 409 aaPredicted RBP16.19■□□□□ 0.18
CHRDL2-209ENST00000534276 PIM2Q9P1W9 311 aa16.19■□□□□ 0.18
CHRDL2-209ENST00000534276 UBR2Q8IWV8 1755 aa16.19■□□□□ 0.18
CHRDL2-209ENST00000534276 A0A087WZG4 1122 aa16.18■□□□□ 0.18
CHRDL2-209ENST00000534276 KCNQ3O43525 872 aa16.18■□□□□ 0.18
CHRDL2-209ENST00000534276 CHRNA5P30532 468 aa16.18■□□□□ 0.18
CHRDL2-209ENST00000534276 DALRD3Q5D0E6 543 aaKnown RBP16.18■□□□□ 0.18
CHRDL2-209ENST00000534276 FMNL2Q96PY5 1086 aa16.18■□□□□ 0.18
CHRDL2-209ENST00000534276 BTBD11A6QL63 1104 aa16.17■□□□□ 0.18
CHRDL2-209ENST00000534276 WDR43Q15061 677 aaKnown RBP eCLIP16.17■□□□□ 0.18
CHRDL2-209ENST00000534276 SERPINB2P05120 415 aa16.16■□□□□ 0.18
CHRDL2-209ENST00000534276 MCM10Q7L590 875 aa16.16■□□□□ 0.18
CHRDL2-209ENST00000534276 RTF1Q92541 710 aaKnown RBP16.16■□□□□ 0.18
CHRDL2-209ENST00000534276 SIPA1L3O60292 1781 aaPredicted RBP16.15■□□□□ 0.18
CHRDL2-209ENST00000534276 IL6STP40189 918 aaPredicted RBP16.15■□□□□ 0.18
CHRDL2-209ENST00000534276 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
CHRDL2-209ENST00000534276 A1BGP04217 495 aa16.14■□□□□ 0.17
CHRDL2-209ENST00000534276 BICDL1Q6ZP65 573 aa16.14■□□□□ 0.17
CHRDL2-209ENST00000534276 NGEFQ8N5V2 710 aa16.14■□□□□ 0.17
CHRDL2-209ENST00000534276 ZNF330Q9Y3S2 320 aaPredicted RBP16.14■□□□□ 0.17
CHRDL2-209ENST00000534276 HTATSF1O43719 755 aaKnown RBP16.13■□□□□ 0.17
CHRDL2-209ENST00000534276 DCTN1Q14203 1278 aa16.13■□□□□ 0.17
CHRDL2-209ENST00000534276 TBC1D2BQ9UPU7 963 aa16.13■□□□□ 0.17
CHRDL2-209ENST00000534276 KIF3CO14782 793 aa16.12■□□□□ 0.17
CHRDL2-209ENST00000534276 C9orf131Q5VYM1 1079 aa16.12■□□□□ 0.17
CHRDL2-209ENST00000534276 ADAMTS8Q9UP79 889 aa16.12■□□□□ 0.17
CHRDL2-209ENST00000534276 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
CHRDL2-209ENST00000534276 USP16Q9Y5T5 823 aa16.11■□□□□ 0.17
CHRDL2-209ENST00000534276 PRAMEF22A3QJZ6 481 aa16.11■□□□□ 0.17
CHRDL2-209ENST00000534276 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
CHRDL2-209ENST00000534276 SNRPA1P09661 255 aaKnown RBP16.11■□□□□ 0.17
CHRDL2-209ENST00000534276 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
CHRDL2-209ENST00000534276 CARMIL3Q8ND23 1372 aa16.1■□□□□ 0.17
CHRDL2-209ENST00000534276 NRXN2Q9P2S2 1712 aa16.1■□□□□ 0.17
CHRDL2-209ENST00000534276 ARFGEF1Q9Y6D6 1849 aa16.1■□□□□ 0.17
CHRDL2-209ENST00000534276 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
CHRDL2-209ENST00000534276 AFDNP55196 1824 aaKnown RBP16.09■□□□□ 0.17
CHRDL2-209ENST00000534276 NEFMP07197 916 aa16.09■□□□□ 0.17
CHRDL2-209ENST00000534276 TAF7Q15545 349 aaPredicted RBP16.09■□□□□ 0.17
CHRDL2-209ENST00000534276 NCBP3Q53F19 620 aaKnown RBP16.09■□□□□ 0.17
CHRDL2-209ENST00000534276 H0YIN7 160 aa16.08■□□□□ 0.16
CHRDL2-209ENST00000534276 PIP4K2AP48426 406 aaPredicted RBP16.08■□□□□ 0.16
CHRDL2-209ENST00000534276 DZIP3Q86Y13 1208 aaKnown RBP16.08■□□□□ 0.16
CHRDL2-209ENST00000534276 TTLL6Q8N841 843 aa16.08■□□□□ 0.16
CHRDL2-209ENST00000534276 PLEKHF1Q96S99 279 aa16.08■□□□□ 0.16
CHRDL2-209ENST00000534276 BRIP1Q9BX63 1249 aa16.08■□□□□ 0.16
CHRDL2-209ENST00000534276 HSPA6P17066 643 aa16.07■□□□□ 0.16
CHRDL2-209ENST00000534276 PRR5LQ6MZQ0 368 aa16.07■□□□□ 0.16
CHRDL2-209ENST00000534276 SETDB2Q96T68 719 aa16.07■□□□□ 0.16
CHRDL2-209ENST00000534276 NMRK2Q9NPI5 230 aa16.07■□□□□ 0.16
CHRDL2-209ENST00000534276 RNF181Q9P0P0 153 aa16.07■□□□□ 0.16
CHRDL2-209ENST00000534276 MIS18AQ9NYP9 233 aa16.06■□□□□ 0.16
CHRDL2-209ENST00000534276 SCN7AQ01118 1682 aa16.06■□□□□ 0.16
CHRDL2-209ENST00000534276 NBPF26B4DH59 902 aa16.05■□□□□ 0.16
CHRDL2-209ENST00000534276 PDE6BP35913 854 aa16.05■□□□□ 0.16
CHRDL2-209ENST00000534276 NFE2L2Q16236 605 aa16.05■□□□□ 0.16
CHRDL2-209ENST00000534276 NBPF10Q6P3W6 841 aaKnown RBP16.05■□□□□ 0.16
CHRDL2-209ENST00000534276 CCDC24Q8N4L8 307 aa16.05■□□□□ 0.16
CHRDL2-209ENST00000534276 NBPF15Q8N660 670 aa16.05■□□□□ 0.16
CHRDL2-209ENST00000534276 CNBD1Q8NA66 436 aa16.05■□□□□ 0.16
CHRDL2-209ENST00000534276 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
CHRDL2-209ENST00000534276 PDZRN3Q9UPQ7 1066 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms