RNA–Protein interactions for RNA: ENST00000534219.5

PTPRJ-206, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 3

Gene PTPRJ, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-206ENST00000534219 COL15A1P39059 1388 aa33.21■■■□□ 2.91
PTPRJ-206ENST00000534219 HEG1Q9ULI3 1381 aa33.21■■■□□ 2.91
PTPRJ-206ENST00000534219 C10orf71Q711Q0 1435 aa33.2■■■□□ 2.91
PTPRJ-206ENST00000534219 NEFMP07197 916 aa33.2■■■□□ 2.91
PTPRJ-206ENST00000534219 PXDNLA1KZ92 1463 aa33.19■■■□□ 2.9
PTPRJ-206ENST00000534219 NARFQ9UHQ1 456 aa33.19■■■□□ 2.9
PTPRJ-206ENST00000534219 DDR1Q08345 913 aa33.18■■■□□ 2.9
PTPRJ-206ENST00000534219 KCNQ3O43525 872 aa33.16■■■□□ 2.9
PTPRJ-206ENST00000534219 DPEP1P16444 411 aa33.16■■■□□ 2.9
PTPRJ-206ENST00000534219 TM4SF1P30408 202 aa33.16■■■□□ 2.9
PTPRJ-206ENST00000534219 DDX10Q13206 875 aaKnown RBP33.16■■■□□ 2.9
PTPRJ-206ENST00000534219 DCTN1Q14203 1278 aa33.16■■■□□ 2.9
PTPRJ-206ENST00000534219 UBR2Q8IWV8 1755 aa33.15■■■□□ 2.9
PTPRJ-206ENST00000534219 BCS1LQ9Y276 419 aa33.15■■■□□ 2.9
PTPRJ-206ENST00000534219 POLRMTO00411 1230 aaKnown RBP33.14■■■□□ 2.9
PTPRJ-206ENST00000534219 HTATSF1O43719 755 aaKnown RBP33.14■■■□□ 2.9
PTPRJ-206ENST00000534219 ZNF330Q9Y3S2 320 aaPredicted RBP33.14■■■□□ 2.9
PTPRJ-206ENST00000534219 A0A087WZG4 1122 aa33.12■■■□□ 2.89
PTPRJ-206ENST00000534219 EIF5P55010 431 aaKnown RBP33.12■■■□□ 2.89
PTPRJ-206ENST00000534219 RALBP1Q15311 655 aa33.11■■■□□ 2.89
PTPRJ-206ENST00000534219 NPM2Q86SE8 214 aaKnown RBP33.11■■■□□ 2.89
PTPRJ-206ENST00000534219 NFIXQ14938 502 aa33.1■■■□□ 2.89
PTPRJ-206ENST00000534219 SIPA1L3O60292 1781 aaPredicted RBP33.09■■■□□ 2.89
PTPRJ-206ENST00000534219 A1BGP04217 495 aa33.09■■■□□ 2.89
PTPRJ-206ENST00000534219 BCL2L12Q9HB09 334 aa33.09■■■□□ 2.89
PTPRJ-206ENST00000534219 KIF13BQ9NQT8 1826 aa33.08■■■□□ 2.89
PTPRJ-206ENST00000534219 PNNQ9H307 717 aaKnown RBP33.08■■■□□ 2.89
PTPRJ-206ENST00000534219 KCNA3P22001 575 aa33.06■■■□□ 2.88
PTPRJ-206ENST00000534219 IL6STP40189 918 aaPredicted RBP33.06■■■□□ 2.88
PTPRJ-206ENST00000534219 BICDL1Q6ZP65 573 aa33.06■■■□□ 2.88
PTPRJ-206ENST00000534219 PLEKHF1Q96S99 279 aa33.06■■■□□ 2.88
PTPRJ-206ENST00000534219 TBC1D2BQ9UPU7 963 aa33.06■■■□□ 2.88
PTPRJ-206ENST00000534219 MAPK8IP3Q9UPT6 1336 aa33.05■■■□□ 2.88
PTPRJ-206ENST00000534219 TAF7Q15545 349 aaPredicted RBP33.05■■■□□ 2.88
PTPRJ-206ENST00000534219 PIM2Q9P1W9 311 aa33.05■■■□□ 2.88
PTPRJ-206ENST00000534219 USP16Q9Y5T5 823 aa33.05■■■□□ 2.88
PTPRJ-206ENST00000534219 N4BP2Q86UW6 1770 aaPredicted RBP33.05■■■□□ 2.88
PTPRJ-206ENST00000534219 GIGYF1O75420 1035 aaPredicted RBP33.04■■■□□ 2.88
PTPRJ-206ENST00000534219 SERPINB2P05120 415 aa33.04■■■□□ 2.88
PTPRJ-206ENST00000534219 SNRPA1P09661 255 aaKnown RBP33.04■■■□□ 2.88
PTPRJ-206ENST00000534219 ATP10DQ9P241 1426 aa33.03■■■□□ 2.88
PTPRJ-206ENST00000534219 KIAA1551Q9HCM1 1747 aa33.03■■■□□ 2.88
PTPRJ-206ENST00000534219 PRAMEF22A3QJZ6 481 aa33.03■■■□□ 2.88
PTPRJ-206ENST00000534219 CHRNA5P30532 468 aa33.03■■■□□ 2.88
PTPRJ-206ENST00000534219 ARHGAP27Q6ZUM4 889 aa33.03■■■□□ 2.88
PTPRJ-206ENST00000534219 NFE2L2Q16236 605 aa33.02■■■□□ 2.88
PTPRJ-206ENST00000534219 MIS18AQ9NYP9 233 aa33.02■■■□□ 2.88
PTPRJ-206ENST00000534219 PIP4K2AP48426 406 aaPredicted RBP33■■■□□ 2.87
PTPRJ-206ENST00000534219 C1QTNF8P60827 252 aa33■■■□□ 2.87
PTPRJ-206ENST00000534219 DALRD3Q5D0E6 543 aaKnown RBP33■■■□□ 2.87
PTPRJ-206ENST00000534219 ZNF526Q8TF50 670 aaPredicted RBP32.99■■■□□ 2.87
PTPRJ-206ENST00000534219 TBC1D9BQ66K14 1250 aa32.98■■■□□ 2.87
PTPRJ-206ENST00000534219 GPBP1L1Q9HC44 474 aaPredicted RBP32.98■■■□□ 2.87
PTPRJ-206ENST00000534219 SENP3-EIF4A1A0A087X0R7 540 aa32.97■■■□□ 2.87
PTPRJ-206ENST00000534219 PNISRQ8TF01 805 aaKnown RBP32.97■■■□□ 2.87
PTPRJ-206ENST00000534219 DZIP3Q86Y13 1208 aaKnown RBP32.96■■■□□ 2.87
PTPRJ-206ENST00000534219 MYBBP1AQ9BQG0 1328 aaKnown RBP32.96■■■□□ 2.87
PTPRJ-206ENST00000534219 ADCY9O60503 1353 aa32.96■■■□□ 2.87
PTPRJ-206ENST00000534219 THUMPD2Q9BTF0 503 aaKnown RBP32.95■■■□□ 2.87
PTPRJ-206ENST00000534219 CAMTA2O94983 1202 aa32.93■■■□□ 2.86
PTPRJ-206ENST00000534219 SETDB2Q96T68 719 aa32.91■■■□□ 2.86
PTPRJ-206ENST00000534219 C2CD5Q86YS7 1000 aa32.9■■■□□ 2.86
PTPRJ-206ENST00000534219 CARMIL3Q8ND23 1372 aa32.9■■■□□ 2.86
PTPRJ-206ENST00000534219 NPHP1O15259 732 aa32.89■■■□□ 2.86
PTPRJ-206ENST00000534219 RIPK4P57078 832 aa32.89■■■□□ 2.86
PTPRJ-206ENST00000534219 H0YIN7 160 aa32.88■■■□□ 2.85
PTPRJ-206ENST00000534219 NBPF26B4DH59 902 aa32.87■■■□□ 2.85
PTPRJ-206ENST00000534219 NBPF10Q6P3W6 841 aaKnown RBP32.87■■■□□ 2.85
PTPRJ-206ENST00000534219 CCDC24Q8N4L8 307 aa32.87■■■□□ 2.85
PTPRJ-206ENST00000534219 NBPF15Q8N660 670 aa32.87■■■□□ 2.85
PTPRJ-206ENST00000534219 SCN7AQ01118 1682 aa32.86■■■□□ 2.85
PTPRJ-206ENST00000534219 PRR5LQ6MZQ0 368 aa32.86■■■□□ 2.85
PTPRJ-206ENST00000534219 NRXN2Q9P2S2 1712 aa32.85■■■□□ 2.85
PTPRJ-206ENST00000534219 EIF4A1P60842 406 aaKnown RBP32.85■■■□□ 2.85
PTPRJ-206ENST00000534219 WDR43Q15061 677 aaKnown RBP eCLIP32.85■■■□□ 2.85
PTPRJ-206ENST00000534219 ZNF652Q9Y2D9 606 aa32.85■■■□□ 2.85
PTPRJ-206ENST00000534219 AFDNP55196 1824 aaKnown RBP32.85■■■□□ 2.85
PTPRJ-206ENST00000534219 BRCA1P38398 1863 aaKnown RBP32.84■■■□□ 2.85
PTPRJ-206ENST00000534219 C9orf131Q5VYM1 1079 aa32.84■■■□□ 2.85
PTPRJ-206ENST00000534219 TTLL6Q8N841 843 aa32.84■■■□□ 2.85
PTPRJ-206ENST00000534219 CNBD1Q8NA66 436 aa32.84■■■□□ 2.85
PTPRJ-206ENST00000534219 BRIP1Q9BX63 1249 aa32.84■■■□□ 2.85
PTPRJ-206ENST00000534219 PDE6BP35913 854 aa32.83■■■□□ 2.85
PTPRJ-206ENST00000534219 CLEC4GQ6UXB4 293 aa32.83■■■□□ 2.85
PTPRJ-206ENST00000534219 CCDC146Q8IYE0 955 aa32.83■■■□□ 2.85
PTPRJ-206ENST00000534219 TMPOP42166 694 aaKnown RBP32.82■■■□□ 2.84
PTPRJ-206ENST00000534219 TSPYL4Q9UJ04 414 aa32.82■■■□□ 2.84
PTPRJ-206ENST00000534219 DLG5Q8TDM6 1919 aa32.82■■■□□ 2.84
PTPRJ-206ENST00000534219 ST5P78524 1137 aa32.81■■■□□ 2.84
PTPRJ-206ENST00000534219 LMOD3Q0VAK6 560 aa32.81■■■□□ 2.84
PTPRJ-206ENST00000534219 NGEFQ8N5V2 710 aa32.81■■■□□ 2.84
PTPRJ-206ENST00000534219 ZNF622Q969S3 477 aaKnown RBP eCLIP32.81■■■□□ 2.84
PTPRJ-206ENST00000534219 NEUROD2Q15784 382 aa32.8■■■□□ 2.84
PTPRJ-206ENST00000534219 PDZRN3Q9UPQ7 1066 aa32.8■■■□□ 2.84
PTPRJ-206ENST00000534219 RRP7AQ9Y3A4 280 aaKnown RBP32.8■■■□□ 2.84
PTPRJ-206ENST00000534219 PRKRIP1Q9H875 184 aaPredicted RBP32.79■■■□□ 2.84
PTPRJ-206ENST00000534219 NBPF5PQ86XG9 351 aaPredicted RBP32.78■■■□□ 2.84
PTPRJ-206ENST00000534219 RNF181Q9P0P0 153 aa32.78■■■□□ 2.84
PTPRJ-206ENST00000534219 ARFGEF1Q9Y6D6 1849 aa32.77■■■□□ 2.84
PTPRJ-206ENST00000534219 RUNDC1Q96C34 613 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms