RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 CAPN15O75808 1086 aa19.52■□□□□ 0.72
SHARPIN-208ENST00000533948 PRELPP51888 382 aa19.52■□□□□ 0.72
SHARPIN-208ENST00000533948 AFDNP55196 1824 aaKnown RBP19.52■□□□□ 0.72
SHARPIN-208ENST00000533948 ZPR1O75312 459 aa19.51■□□□□ 0.71
SHARPIN-208ENST00000533948 SOS1Q07889 1333 aaPredicted RBP19.51■□□□□ 0.71
SHARPIN-208ENST00000533948 KNSTRNQ9Y448 316 aa19.5■□□□□ 0.71
SHARPIN-208ENST00000533948 NFIXQ14938 502 aa19.49■□□□□ 0.71
SHARPIN-208ENST00000533948 SMC1BQ8NDV3 1235 aa19.49■□□□□ 0.71
SHARPIN-208ENST00000533948 SLC39A6Q13433 755 aa19.48■□□□□ 0.71
SHARPIN-208ENST00000533948 AKAP4Q5JQC9 854 aa19.48■□□□□ 0.71
SHARPIN-208ENST00000533948 LGR6Q9HBX8 967 aa19.48■□□□□ 0.71
SHARPIN-208ENST00000533948 NRXN2Q9P2S2 1712 aa19.48■□□□□ 0.71
SHARPIN-208ENST00000533948 CYP19A1P11511 503 aaPredicted RBP19.47■□□□□ 0.71
SHARPIN-208ENST00000533948 IL13P35225 146 aa19.47■□□□□ 0.71
SHARPIN-208ENST00000533948 SLC52A2Q9HAB3 445 aa19.47■□□□□ 0.71
SHARPIN-208ENST00000533948 BCL2L12Q9HB09 334 aa19.47■□□□□ 0.71
SHARPIN-208ENST00000533948 ZBTB1Q9Y2K1 713 aa19.47■□□□□ 0.71
SHARPIN-208ENST00000533948 DLEC1Q9Y238 1755 aa19.47■□□□□ 0.71
SHARPIN-208ENST00000533948 CARMIL3Q8ND23 1372 aa19.46■□□□□ 0.71
SHARPIN-208ENST00000533948 COL15A1P39059 1388 aa19.45■□□□□ 0.7
SHARPIN-208ENST00000533948 TIAM2Q8IVF5 1701 aa19.45■□□□□ 0.7
SHARPIN-208ENST00000533948 LMNB1P20700 586 aa19.45■□□□□ 0.7
SHARPIN-208ENST00000533948 TNS4Q8IZW8 715 aa19.45■□□□□ 0.7
SHARPIN-208ENST00000533948 NARFQ9UHQ1 456 aa19.45■□□□□ 0.7
SHARPIN-208ENST00000533948 CCDC88AQ3V6T2 1871 aa19.45■□□□□ 0.7
SHARPIN-208ENST00000533948 VIRMAQ69YN4 1812 aaKnown RBP19.44■□□□□ 0.7
SHARPIN-208ENST00000533948 MRC1P22897 1456 aa19.44■□□□□ 0.7
SHARPIN-208ENST00000533948 GLTPD2A6NH11 291 aa19.44■□□□□ 0.7
SHARPIN-208ENST00000533948 ZC3H4Q9UPT8 1303 aaKnown RBP19.44■□□□□ 0.7
SHARPIN-208ENST00000533948 SERPINB2P05120 415 aa19.43■□□□□ 0.7
SHARPIN-208ENST00000533948 NFKBIEO00221 500 aa19.42■□□□□ 0.7
SHARPIN-208ENST00000533948 RNMTO43148 476 aaKnown RBP19.42■□□□□ 0.7
SHARPIN-208ENST00000533948 VEGFAP15692 232 aaPredicted RBP19.42■□□□□ 0.7
SHARPIN-208ENST00000533948 C2CD5Q86YS7 1000 aa19.42■□□□□ 0.7
SHARPIN-208ENST00000533948 TTLL6Q8N841 843 aa19.42■□□□□ 0.7
SHARPIN-208ENST00000533948 HMOX1P09601 288 aa19.41■□□□□ 0.7
SHARPIN-208ENST00000533948 HSPA1AP0DMV8 641 aaKnown RBP19.41■□□□□ 0.7
SHARPIN-208ENST00000533948 HSPA1BP0DMV9 641 aaKnown RBP19.41■□□□□ 0.7
SHARPIN-208ENST00000533948 POTECB2RU33 542 aa19.4■□□□□ 0.7
SHARPIN-208ENST00000533948 CANXP27824 592 aaKnown RBP19.4■□□□□ 0.7
SHARPIN-208ENST00000533948 BICDL1Q6ZP65 573 aa19.4■□□□□ 0.7
SHARPIN-208ENST00000533948 VSIG10Q8N0Z9 540 aa19.39■□□□□ 0.69
SHARPIN-208ENST00000533948 ANKRD31Q8N7Z5 1873 aa19.39■□□□□ 0.69
SHARPIN-208ENST00000533948 KIF7Q2M1P5 1343 aa19.38■□□□□ 0.69
SHARPIN-208ENST00000533948 CCDC24Q8N4L8 307 aa19.38■□□□□ 0.69
SHARPIN-208ENST00000533948 ZNF219Q9P2Y4 722 aaPredicted RBP19.38■□□□□ 0.69
SHARPIN-208ENST00000533948 UBR2Q8IWV8 1755 aa19.37■□□□□ 0.69
SHARPIN-208ENST00000533948 H0YIN7 160 aa19.37■□□□□ 0.69
SHARPIN-208ENST00000533948 MTHFSDQ2M296 383 aaKnown RBP19.37■□□□□ 0.69
SHARPIN-208ENST00000533948 COL11A2P13942 1736 aaPredicted RBP19.37■□□□□ 0.69
SHARPIN-208ENST00000533948 STARD3NLO95772 234 aa19.36■□□□□ 0.69
SHARPIN-208ENST00000533948 TBC1D9BQ66K14 1250 aa19.36■□□□□ 0.69
SHARPIN-208ENST00000533948 A0A087WZG4 1122 aa19.35■□□□□ 0.69
SHARPIN-208ENST00000533948 DIAPH1O60610 1272 aaKnown RBP19.35■□□□□ 0.69
SHARPIN-208ENST00000533948 AMER1Q5JTC6 1135 aaPredicted RBP19.35■□□□□ 0.69
SHARPIN-208ENST00000533948 TTC5Q8N0Z6 440 aa19.35■□□□□ 0.69
SHARPIN-208ENST00000533948 C21orf2O43822 256 aa19.34■□□□□ 0.69
SHARPIN-208ENST00000533948 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
SHARPIN-208ENST00000533948 ZNF622Q969S3 477 aaKnown RBP eCLIP19.34■□□□□ 0.69
SHARPIN-208ENST00000533948 SCN7AQ01118 1682 aa19.33■□□□□ 0.69
SHARPIN-208ENST00000533948 FER1L6Q2WGJ9 1857 aa19.33■□□□□ 0.69
SHARPIN-208ENST00000533948 DPY19L2Q6NUT2 758 aa19.33■□□□□ 0.68
SHARPIN-208ENST00000533948 DICER1Q9UPY3 1922 aaKnown RBP19.32■□□□□ 0.68
SHARPIN-208ENST00000533948 POTEIP0CG38 1075 aa19.32■□□□□ 0.68
SHARPIN-208ENST00000533948 POTEJP0CG39 1038 aa19.32■□□□□ 0.68
SHARPIN-208ENST00000533948 ERFEQ4G0M1 354 aa19.32■□□□□ 0.68
SHARPIN-208ENST00000533948 PRR5LQ6MZQ0 368 aa19.32■□□□□ 0.68
SHARPIN-208ENST00000533948 NPM2Q86SE8 214 aaKnown RBP19.32■□□□□ 0.68
SHARPIN-208ENST00000533948 TEX13AQ9BXU3 409 aaPredicted RBP19.32■□□□□ 0.68
SHARPIN-208ENST00000533948 PDZRN3Q9UPQ7 1066 aa19.32■□□□□ 0.68
SHARPIN-208ENST00000533948 ZNF330Q9Y3S2 320 aaPredicted RBP19.32■□□□□ 0.68
SHARPIN-208ENST00000533948 TBC1D2BQ9UPU7 963 aa19.31■□□□□ 0.68
SHARPIN-208ENST00000533948 ZNF496Q96IT1 587 aaPredicted RBP19.3■□□□□ 0.68
SHARPIN-208ENST00000533948 MKRN1Q9UHC7 482 aaKnown RBP19.3■□□□□ 0.68
SHARPIN-208ENST00000533948 CACNA1SQ13698 1873 aa19.3■□□□□ 0.68
SHARPIN-208ENST00000533948 PDE6BP35913 854 aa19.29■□□□□ 0.68
SHARPIN-208ENST00000533948 TEFQ10587 303 aa19.29■□□□□ 0.68
SHARPIN-208ENST00000533948 BRIP1Q9BX63 1249 aa19.29■□□□□ 0.68
SHARPIN-208ENST00000533948 SLX4Q8IY92 1834 aa19.29■□□□□ 0.68
SHARPIN-208ENST00000533948 DDNO94850 711 aaPredicted RBP19.28■□□□□ 0.68
SHARPIN-208ENST00000533948 CC2D1BQ5T0F9 858 aaKnown RBP19.28■□□□□ 0.68
SHARPIN-208ENST00000533948 HEG1Q9ULI3 1381 aa19.28■□□□□ 0.68
SHARPIN-208ENST00000533948 NPHP1O15259 732 aa19.27■□□□□ 0.68
SHARPIN-208ENST00000533948 PER1O15534 1290 aaPredicted RBP19.27■□□□□ 0.68
SHARPIN-208ENST00000533948 CHADLQ6NUI6 762 aa19.27■□□□□ 0.68
SHARPIN-208ENST00000533948 TAOK3Q9H2K8 898 aa19.27■□□□□ 0.68
SHARPIN-208ENST00000533948 GNAT3A8MTJ3 354 aa19.26■□□□□ 0.67
SHARPIN-208ENST00000533948 A1BGP04217 495 aa19.26■□□□□ 0.67
SHARPIN-208ENST00000533948 ZNF790Q6PG37 636 aa19.26■□□□□ 0.67
SHARPIN-208ENST00000533948 IL17REQ8NFR9 667 aa19.26■□□□□ 0.67
SHARPIN-208ENST00000533948 GAS2L2Q8NHY3 880 aa19.26■□□□□ 0.67
SHARPIN-208ENST00000533948 CREBZFQ9NS37 354 aa19.26■□□□□ 0.67
SHARPIN-208ENST00000533948 SIPA1L3O60292 1781 aaPredicted RBP19.26■□□□□ 0.67
SHARPIN-208ENST00000533948 U2SURPO15042 1029 aaKnown RBP19.25■□□□□ 0.67
SHARPIN-208ENST00000533948 CAMTA2O94983 1202 aa19.25■□□□□ 0.67
SHARPIN-208ENST00000533948 PRPF40BQ6NWY9 871 aaKnown RBP19.25■□□□□ 0.67
SHARPIN-208ENST00000533948 SETDB2Q96T68 719 aa19.25■□□□□ 0.67
SHARPIN-208ENST00000533948 LTBP3Q9NS15 1303 aa19.25■□□□□ 0.67
SHARPIN-208ENST00000533948 IL6STP40189 918 aaPredicted RBP19.24■□□□□ 0.67
SHARPIN-208ENST00000533948 CNBD1Q8NA66 436 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms