RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 C9orf131Q5VYM1 1079 aa24.45■■□□□ 1.5
UBXN1-216ENST00000533908 ARFGEF1Q9Y6D6 1849 aa24.45■■□□□ 1.5
UBXN1-216ENST00000533908 NFIXQ14938 502 aa24.44■■□□□ 1.5
UBXN1-216ENST00000533908 NARFQ9UHQ1 456 aa24.44■■□□□ 1.5
UBXN1-216ENST00000533908 CNGB1Q14028 1251 aaPredicted RBP24.43■■□□□ 1.5
UBXN1-216ENST00000533908 IL17REQ8NFR9 667 aa24.42■■□□□ 1.5
UBXN1-216ENST00000533908 COL3A1P02461 1466 aaPredicted RBP24.41■■□□□ 1.5
UBXN1-216ENST00000533908 TOMM70O94826 608 aa24.41■■□□□ 1.5
UBXN1-216ENST00000533908 VSIG10Q8N0Z9 540 aa24.41■■□□□ 1.5
UBXN1-216ENST00000533908 COL15A1P39059 1388 aa24.41■■□□□ 1.5
UBXN1-216ENST00000533908 CANXP27824 592 aaKnown RBP24.39■■□□□ 1.49
UBXN1-216ENST00000533908 AFDNP55196 1824 aaKnown RBP24.38■■□□□ 1.49
UBXN1-216ENST00000533908 UBR2Q8IWV8 1755 aa24.37■■□□□ 1.49
UBXN1-216ENST00000533908 U2SURPO15042 1029 aaKnown RBP24.37■■□□□ 1.49
UBXN1-216ENST00000533908 SERPINB2P05120 415 aa24.37■■□□□ 1.49
UBXN1-216ENST00000533908 EIF5P55010 431 aaKnown RBP24.37■■□□□ 1.49
UBXN1-216ENST00000533908 ZNF496Q96IT1 587 aaPredicted RBP24.37■■□□□ 1.49
UBXN1-216ENST00000533908 RNF181Q9P0P0 153 aa24.37■■□□□ 1.49
UBXN1-216ENST00000533908 NPC1L1Q9UHC9 1359 aa24.37■■□□□ 1.49
UBXN1-216ENST00000533908 IFFO2Q5TF58 517 aa24.36■■□□□ 1.49
UBXN1-216ENST00000533908 NRXN2Q9P2S2 1712 aa24.35■■□□□ 1.49
UBXN1-216ENST00000533908 PRELPP51888 382 aa24.35■■□□□ 1.49
UBXN1-216ENST00000533908 DNAJC5GQ8N7S2 189 aa24.35■■□□□ 1.49
UBXN1-216ENST00000533908 SBF1O95248 1867 aa24.34■■□□□ 1.49
UBXN1-216ENST00000533908 CARMIL3Q8ND23 1372 aa24.33■■□□□ 1.49
UBXN1-216ENST00000533908 GNAT3A8MTJ3 354 aa24.33■■□□□ 1.49
UBXN1-216ENST00000533908 APLP1P51693 650 aa24.33■■□□□ 1.49
UBXN1-216ENST00000533908 ZNF790Q6PG37 636 aa24.33■■□□□ 1.49
UBXN1-216ENST00000533908 PHACTR3Q96KR7 559 aa24.33■■□□□ 1.49
UBXN1-216ENST00000533908 STARD3NLO95772 234 aa24.32■■□□□ 1.48
UBXN1-216ENST00000533908 RASSF7Q02833 373 aa24.32■■□□□ 1.48
UBXN1-216ENST00000533908 BICDL1Q6ZP65 573 aa24.32■■□□□ 1.48
UBXN1-216ENST00000533908 TTC5Q8N0Z6 440 aa24.32■■□□□ 1.48
UBXN1-216ENST00000533908 HEG1Q9ULI3 1381 aa24.31■■□□□ 1.48
UBXN1-216ENST00000533908 KCNQ3O43525 872 aa24.31■■□□□ 1.48
UBXN1-216ENST00000533908 TEFQ10587 303 aa24.31■■□□□ 1.48
UBXN1-216ENST00000533908 GAS2L2Q8NHY3 880 aa24.31■■□□□ 1.48
UBXN1-216ENST00000533908 RBM46Q8TBY0 533 aaKnown RBP24.31■■□□□ 1.48
UBXN1-216ENST00000533908 RRAGCQ9HB90 399 aa24.31■■□□□ 1.48
UBXN1-216ENST00000533908 TBC1D9BQ66K14 1250 aa24.3■■□□□ 1.48
UBXN1-216ENST00000533908 C2CD5Q86YS7 1000 aa24.3■■□□□ 1.48
UBXN1-216ENST00000533908 TBC1D2BQ9UPU7 963 aa24.29■■□□□ 1.48
UBXN1-216ENST00000533908 SIPA1L3O60292 1781 aaPredicted RBP24.29■■□□□ 1.48
UBXN1-216ENST00000533908 A1BGP04217 495 aa24.28■■□□□ 1.48
UBXN1-216ENST00000533908 TTLL6Q8N841 843 aa24.28■■□□□ 1.48
UBXN1-216ENST00000533908 KDM2BQ8NHM5 1336 aa24.28■■□□□ 1.48
UBXN1-216ENST00000533908 HTRA3P83110 453 aa24.27■■□□□ 1.48
UBXN1-216ENST00000533908 CCDC24Q8N4L8 307 aa24.27■■□□□ 1.48
UBXN1-216ENST00000533908 RSPH6AQ9H0K4 717 aa24.27■■□□□ 1.48
UBXN1-216ENST00000533908 CEMIPQ8WUJ3 1361 aa24.27■■□□□ 1.48
UBXN1-216ENST00000533908 A0A087WZG4 1122 aa24.26■■□□□ 1.47
UBXN1-216ENST00000533908 H0YIN7 160 aa24.26■■□□□ 1.47
UBXN1-216ENST00000533908 PRKAR2BP31323 418 aa24.26■■□□□ 1.47
UBXN1-216ENST00000533908 TEX13AQ9BXU3 409 aaPredicted RBP24.26■■□□□ 1.47
UBXN1-216ENST00000533908 DLEC1Q9Y238 1755 aa24.26■■□□□ 1.47
UBXN1-216ENST00000533908 C16orf71Q8IYS4 520 aaPredicted RBP24.25■■□□□ 1.47
UBXN1-216ENST00000533908 ZNF330Q9Y3S2 320 aaPredicted RBP24.25■■□□□ 1.47
UBXN1-216ENST00000533908 NFKBIEO00221 500 aa24.24■■□□□ 1.47
UBXN1-216ENST00000533908 IL6STP40189 918 aaPredicted RBP24.24■■□□□ 1.47
UBXN1-216ENST00000533908 FMNL2Q96PY5 1086 aa24.24■■□□□ 1.47
UBXN1-216ENST00000533908 LMNB1P20700 586 aa24.23■■□□□ 1.47
UBXN1-216ENST00000533908 FSTL1Q12841 308 aa24.23■■□□□ 1.47
UBXN1-216ENST00000533908 PRR5LQ6MZQ0 368 aa24.23■■□□□ 1.47
UBXN1-216ENST00000533908 USP16Q9Y5T5 823 aa24.23■■□□□ 1.47
UBXN1-216ENST00000533908 ANKRD31Q8N7Z5 1873 aa24.23■■□□□ 1.47
UBXN1-216ENST00000533908 PRAMEF22A3QJZ6 481 aa24.22■■□□□ 1.47
UBXN1-216ENST00000533908 BTBD11A6QL63 1104 aa24.22■■□□□ 1.47
UBXN1-216ENST00000533908 BRIP1Q9BX63 1249 aa24.22■■□□□ 1.47
UBXN1-216ENST00000533908 CAMTA2O94983 1202 aa24.21■■□□□ 1.47
UBXN1-216ENST00000533908 PIP4K2AP48426 406 aaPredicted RBP24.21■■□□□ 1.47
UBXN1-216ENST00000533908 GLTPD2A6NH11 291 aa24.2■■□□□ 1.46
UBXN1-216ENST00000533908 PPP2R1AP30153 589 aa24.2■■□□□ 1.46
UBXN1-216ENST00000533908 ZNF622Q969S3 477 aaKnown RBP eCLIP24.2■■□□□ 1.46
UBXN1-216ENST00000533908 WDR90Q96KV7 1748 aa24.19■■□□□ 1.46
UBXN1-216ENST00000533908 ZC3H4Q9UPT8 1303 aaKnown RBP24.19■■□□□ 1.46
UBXN1-216ENST00000533908 SCN7AQ01118 1682 aa24.19■■□□□ 1.46
UBXN1-216ENST00000533908 CFAP53Q96M91 514 aa24.19■■□□□ 1.46
UBXN1-216ENST00000533908 ZNF219Q9P2Y4 722 aaPredicted RBP24.19■■□□□ 1.46
UBXN1-216ENST00000533908 TNRC6CQ9HCJ0 1690 aaKnown RBP24.18■■□□□ 1.46
UBXN1-216ENST00000533908 CCDC88AQ3V6T2 1871 aa24.18■■□□□ 1.46
UBXN1-216ENST00000533908 MCM10Q7L590 875 aa24.18■■□□□ 1.46
UBXN1-216ENST00000533908 C21orf2O43822 256 aa24.17■■□□□ 1.46
UBXN1-216ENST00000533908 U2AF1L5P0DN76 240 aaPredicted RBP24.17■■□□□ 1.46
UBXN1-216ENST00000533908 PDE6BP35913 854 aa24.17■■□□□ 1.46
UBXN1-216ENST00000533908 U2AF1Q01081 240 aaKnown RBP eCLIP24.17■■□□□ 1.46
UBXN1-216ENST00000533908 SETDB2Q96T68 719 aa24.17■■□□□ 1.46
UBXN1-216ENST00000533908 POTECB2RU33 542 aa24.16■■□□□ 1.46
UBXN1-216ENST00000533908 DCTN1Q14203 1278 aa24.16■■□□□ 1.46
UBXN1-216ENST00000533908 DZIP3Q86Y13 1208 aaKnown RBP24.16■■□□□ 1.46
UBXN1-216ENST00000533908 COL11A2P13942 1736 aaPredicted RBP24.15■■□□□ 1.46
UBXN1-216ENST00000533908 VEGFAP15692 232 aaPredicted RBP24.15■■□□□ 1.46
UBXN1-216ENST00000533908 KLRG1Q96E93 195 aa24.15■■□□□ 1.46
UBXN1-216ENST00000533908 NUDCQ9Y266 331 aa24.15■■□□□ 1.46
UBXN1-216ENST00000533908 SMC1BQ8NDV3 1235 aa24.14■■□□□ 1.45
UBXN1-216ENST00000533908 PDZRN3Q9UPQ7 1066 aa24.14■■□□□ 1.45
UBXN1-216ENST00000533908 CNBD1Q8NA66 436 aa24.13■■□□□ 1.45
UBXN1-216ENST00000533908 NBPF26B4DH59 902 aa24.12■■□□□ 1.45
UBXN1-216ENST00000533908 SRGNP10124 158 aa24.12■■□□□ 1.45
UBXN1-216ENST00000533908 NBPF10Q6P3W6 841 aaKnown RBP24.12■■□□□ 1.45
UBXN1-216ENST00000533908 NBPF15Q8N660 670 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms