RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 EIF5P55010 431 aaKnown RBP12.65□□□□□ -0.38
FOXRED1-216ENST00000533839 RIPK4P57078 832 aa12.65□□□□□ -0.38
FOXRED1-216ENST00000533839 FKBP8Q14318 412 aa12.65□□□□□ -0.38
FOXRED1-216ENST00000533839 ZBTB1Q9Y2K1 713 aa12.65□□□□□ -0.38
FOXRED1-216ENST00000533839 SCN11AQ9UI33 1791 aa12.65□□□□□ -0.38
FOXRED1-216ENST00000533839 NPHP1O15259 732 aa12.64□□□□□ -0.39
FOXRED1-216ENST00000533839 DCTN1Q14203 1278 aa12.64□□□□□ -0.39
FOXRED1-216ENST00000533839 PIM2Q9P1W9 311 aa12.64□□□□□ -0.39
FOXRED1-216ENST00000533839 MRC1P22897 1456 aa12.64□□□□□ -0.39
FOXRED1-216ENST00000533839 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
FOXRED1-216ENST00000533839 A1BGP04217 495 aa12.63□□□□□ -0.39
FOXRED1-216ENST00000533839 RUNDC1Q96C34 613 aa12.63□□□□□ -0.39
FOXRED1-216ENST00000533839 PRKRIP1Q9H875 184 aaPredicted RBP12.63□□□□□ -0.39
FOXRED1-216ENST00000533839 BABAM1Q9NWV8 329 aa12.63□□□□□ -0.39
FOXRED1-216ENST00000533839 PDZRN3Q9UPQ7 1066 aa12.63□□□□□ -0.39
FOXRED1-216ENST00000533839 ZNF652Q9Y2D9 606 aa12.63□□□□□ -0.39
FOXRED1-216ENST00000533839 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
FOXRED1-216ENST00000533839 UBR3Q6ZT12 1888 aa12.62□□□□□ -0.39
FOXRED1-216ENST00000533839 COL15A1P39059 1388 aa12.62□□□□□ -0.39
FOXRED1-216ENST00000533839 KCNQ3O43525 872 aa12.62□□□□□ -0.39
FOXRED1-216ENST00000533839 SERPINB2P05120 415 aa12.62□□□□□ -0.39
FOXRED1-216ENST00000533839 YBX3P16989 372 aaKnown RBP eCLIP12.62□□□□□ -0.39
FOXRED1-216ENST00000533839 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
FOXRED1-216ENST00000533839 SETDB2Q96T68 719 aa12.62□□□□□ -0.39
FOXRED1-216ENST00000533839 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
FOXRED1-216ENST00000533839 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
FOXRED1-216ENST00000533839 TUBGCP6Q96RT7 1819 aa12.61□□□□□ -0.39
FOXRED1-216ENST00000533839 POLRMTO00411 1230 aaKnown RBP12.61□□□□□ -0.39
FOXRED1-216ENST00000533839 DPEP1P16444 411 aa12.61□□□□□ -0.39
FOXRED1-216ENST00000533839 TMPOP42166 694 aaKnown RBP12.61□□□□□ -0.39
FOXRED1-216ENST00000533839 NFIXQ14938 502 aa12.61□□□□□ -0.39
FOXRED1-216ENST00000533839 DZIP3Q86Y13 1208 aaKnown RBP12.61□□□□□ -0.39
FOXRED1-216ENST00000533839 ZNF784Q8NCA9 323 aaPredicted RBP12.61□□□□□ -0.39
FOXRED1-216ENST00000533839 MIS18AQ9NYP9 233 aa12.61□□□□□ -0.39
FOXRED1-216ENST00000533839 COL24A1Q17RW2 1714 aa12.61□□□□□ -0.39
FOXRED1-216ENST00000533839 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
FOXRED1-216ENST00000533839 H0YIN7 160 aa12.6□□□□□ -0.39
FOXRED1-216ENST00000533839 DALRD3Q5D0E6 543 aaKnown RBP12.6□□□□□ -0.39
FOXRED1-216ENST00000533839 BICDL1Q6ZP65 573 aa12.6□□□□□ -0.39
FOXRED1-216ENST00000533839 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
FOXRED1-216ENST00000533839 RGL2O15211 777 aa12.59□□□□□ -0.39
FOXRED1-216ENST00000533839 PDE6BP35913 854 aa12.59□□□□□ -0.39
FOXRED1-216ENST00000533839 DDR1Q08345 913 aa12.59□□□□□ -0.39
FOXRED1-216ENST00000533839 NEUROD2Q15784 382 aa12.59□□□□□ -0.39
FOXRED1-216ENST00000533839 TSPYL4Q9UJ04 414 aa12.59□□□□□ -0.39
FOXRED1-216ENST00000533839 ADAMTS8Q9UP79 889 aa12.59□□□□□ -0.39
FOXRED1-216ENST00000533839 KCPQ6ZWJ8 1503 aa12.58□□□□□ -0.4
FOXRED1-216ENST00000533839 GIGYF1O75420 1035 aaPredicted RBP12.58□□□□□ -0.4
FOXRED1-216ENST00000533839 EIF4A1P60842 406 aaKnown RBP12.58□□□□□ -0.4
FOXRED1-216ENST00000533839 CALD1Q05682 793 aaKnown RBP12.58□□□□□ -0.4
FOXRED1-216ENST00000533839 TPTE2Q6XPS3 522 aa12.58□□□□□ -0.4
FOXRED1-216ENST00000533839 CHMP4AQ9BY43 222 aa12.58□□□□□ -0.4
FOXRED1-216ENST00000533839 WWC3Q9ULE0 1092 aa12.58□□□□□ -0.4
FOXRED1-216ENST00000533839 ANP32CO43423 234 aa12.57□□□□□ -0.4
FOXRED1-216ENST00000533839 GTF2E1P29083 439 aaPredicted RBP12.57□□□□□ -0.4
FOXRED1-216ENST00000533839 ST5P78524 1137 aa12.57□□□□□ -0.4
FOXRED1-216ENST00000533839 BRIP1Q9BX63 1249 aa12.57□□□□□ -0.4
FOXRED1-216ENST00000533839 BCL2L12Q9HB09 334 aa12.57□□□□□ -0.4
FOXRED1-216ENST00000533839 RRP7AQ9Y3A4 280 aaKnown RBP12.57□□□□□ -0.4
FOXRED1-216ENST00000533839 ADAMTS7Q9UKP4 1686 aa12.57□□□□□ -0.4
FOXRED1-216ENST00000533839 MYH14Q7Z406 1995 aaKnown RBP12.56□□□□□ -0.4
FOXRED1-216ENST00000533839 CAMTA2O94983 1202 aa12.56□□□□□ -0.4
FOXRED1-216ENST00000533839 TBC1D9BQ66K14 1250 aa12.56□□□□□ -0.4
FOXRED1-216ENST00000533839 C2CD5Q86YS7 1000 aa12.56□□□□□ -0.4
FOXRED1-216ENST00000533839 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
FOXRED1-216ENST00000533839 TTLL6Q8N841 843 aa12.56□□□□□ -0.4
FOXRED1-216ENST00000533839 THUMPD2Q9BTF0 503 aaKnown RBP12.56□□□□□ -0.4
FOXRED1-216ENST00000533839 COL5A3P25940 1745 aaPredicted RBP12.55□□□□□ -0.4
FOXRED1-216ENST00000533839 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
FOXRED1-216ENST00000533839 KIF6Q6ZMV9 814 aa12.55□□□□□ -0.4
FOXRED1-216ENST00000533839 NBPF5PQ86XG9 351 aaPredicted RBP12.55□□□□□ -0.4
FOXRED1-216ENST00000533839 NGEFQ8N5V2 710 aa12.55□□□□□ -0.4
FOXRED1-216ENST00000533839 CNBD1Q8NA66 436 aa12.55□□□□□ -0.4
FOXRED1-216ENST00000533839 LAS1LQ9Y4W2 734 aaKnown RBP12.55□□□□□ -0.4
FOXRED1-216ENST00000533839 ERBB4Q15303 1308 aa12.55□□□□□ -0.4
FOXRED1-216ENST00000533839 CARMIL3Q8ND23 1372 aa12.55□□□□□ -0.4
FOXRED1-216ENST00000533839 C10orf71Q711Q0 1435 aa12.54□□□□□ -0.4
FOXRED1-216ENST00000533839 PRAMEF22A3QJZ6 481 aa12.54□□□□□ -0.4
FOXRED1-216ENST00000533839 KCNA3P22001 575 aa12.54□□□□□ -0.4
FOXRED1-216ENST00000533839 CHRNA5P30532 468 aa12.54□□□□□ -0.4
FOXRED1-216ENST00000533839 ZNF622Q969S3 477 aaKnown RBP eCLIP12.54□□□□□ -0.4
FOXRED1-216ENST00000533839 GPBP1L1Q9HC44 474 aaPredicted RBP12.54□□□□□ -0.4
FOXRED1-216ENST00000533839 CICQ96RK0 1608 aaPredicted RBP12.54□□□□□ -0.4
FOXRED1-216ENST00000533839 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
FOXRED1-216ENST00000533839 EIF2S2P20042 333 aaKnown RBP12.53□□□□□ -0.4
FOXRED1-216ENST00000533839 NBPF10Q6P3W6 841 aaKnown RBP12.53□□□□□ -0.4
FOXRED1-216ENST00000533839 NBPF15Q8N660 670 aa12.53□□□□□ -0.4
FOXRED1-216ENST00000533839 CNKSR1Q969H4 720 aa12.53□□□□□ -0.4
FOXRED1-216ENST00000533839 NYXQ9GZU5 481 aa12.53□□□□□ -0.4
FOXRED1-216ENST00000533839 NIP7Q9Y221 180 aaKnown RBP eCLIP12.53□□□□□ -0.4
FOXRED1-216ENST00000533839 TJP1Q07157 1748 aa12.52□□□□□ -0.41
FOXRED1-216ENST00000533839 CHL1O00533 1208 aa12.52□□□□□ -0.41
FOXRED1-216ENST00000533839 MYL6BP14649 208 aa12.52□□□□□ -0.41
FOXRED1-216ENST00000533839 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
FOXRED1-216ENST00000533839 CHD4Q14839 1912 aa12.52□□□□□ -0.41
FOXRED1-216ENST00000533839 PXDNLA1KZ92 1463 aa12.52□□□□□ -0.41
FOXRED1-216ENST00000533839 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
FOXRED1-216ENST00000533839 GNAI1P63096 354 aa12.51□□□□□ -0.41
FOXRED1-216ENST00000533839 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
FOXRED1-216ENST00000533839 PRR5LQ6MZQ0 368 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms