RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 IL17REQ8NFR9 667 aa24.69■■□□□ 1.54
HIF3A-216ENST00000533789 PHACTR3Q96KR7 559 aa24.68■■□□□ 1.54
HIF3A-216ENST00000533789 ZBTB1Q9Y2K1 713 aa24.68■■□□□ 1.54
HIF3A-216ENST00000533789 SBF1O95248 1867 aa24.68■■□□□ 1.54
HIF3A-216ENST00000533789 LAMB4A4D0S4 1761 aa24.67■■□□□ 1.54
HIF3A-216ENST00000533789 ZPR1O75312 459 aa24.66■■□□□ 1.54
HIF3A-216ENST00000533789 DDR1Q08345 913 aa24.66■■□□□ 1.54
HIF3A-216ENST00000533789 ZNF790Q6PG37 636 aa24.66■■□□□ 1.54
HIF3A-216ENST00000533789 HEG1Q9ULI3 1381 aa24.66■■□□□ 1.54
HIF3A-216ENST00000533789 GIGYF1O75420 1035 aaPredicted RBP24.65■■□□□ 1.54
HIF3A-216ENST00000533789 U2AF1L5P0DN76 240 aaPredicted RBP24.65■■□□□ 1.54
HIF3A-216ENST00000533789 U2AF1Q01081 240 aaKnown RBP eCLIP24.65■■□□□ 1.54
HIF3A-216ENST00000533789 USPL1Q5W0Q7 1092 aa24.65■■□□□ 1.54
HIF3A-216ENST00000533789 ANKRD31Q8N7Z5 1873 aa24.65■■□□□ 1.54
HIF3A-216ENST00000533789 A0A0G2JLW4 131 aa24.64■■□□□ 1.54
HIF3A-216ENST00000533789 ZNF496Q96IT1 587 aaPredicted RBP24.64■■□□□ 1.54
HIF3A-216ENST00000533789 NARFQ9UHQ1 456 aa24.64■■□□□ 1.54
HIF3A-216ENST00000533789 KDM3BQ7LBC6 1761 aa24.64■■□□□ 1.53
HIF3A-216ENST00000533789 POLRMTO00411 1230 aaKnown RBP24.63■■□□□ 1.53
HIF3A-216ENST00000533789 DPEP1P16444 411 aa24.63■■□□□ 1.53
HIF3A-216ENST00000533789 C1QTNF8P60827 252 aa24.63■■□□□ 1.53
HIF3A-216ENST00000533789 CCDC88AQ3V6T2 1871 aa24.62■■□□□ 1.53
HIF3A-216ENST00000533789 FCHSD2O94868 740 aa24.62■■□□□ 1.53
HIF3A-216ENST00000533789 STARD3NLO95772 234 aa24.62■■□□□ 1.53
HIF3A-216ENST00000533789 TM4SF1P30408 202 aa24.62■■□□□ 1.53
HIF3A-216ENST00000533789 BCS1LQ9Y276 419 aa24.62■■□□□ 1.53
HIF3A-216ENST00000533789 CACNA1SQ13698 1873 aa24.61■■□□□ 1.53
HIF3A-216ENST00000533789 TEX13AQ9BXU3 409 aaPredicted RBP24.6■■□□□ 1.53
HIF3A-216ENST00000533789 CANXP27824 592 aaKnown RBP24.59■■□□□ 1.53
HIF3A-216ENST00000533789 FMNL2Q96PY5 1086 aa24.59■■□□□ 1.53
HIF3A-216ENST00000533789 KCNA3P22001 575 aa24.58■■□□□ 1.53
HIF3A-216ENST00000533789 EIF5P55010 431 aaKnown RBP24.58■■□□□ 1.53
HIF3A-216ENST00000533789 COL11A2P13942 1736 aaPredicted RBP24.58■■□□□ 1.52
HIF3A-216ENST00000533789 BTBD11A6QL63 1104 aa24.57■■□□□ 1.52
HIF3A-216ENST00000533789 NFIXQ14938 502 aa24.57■■□□□ 1.52
HIF3A-216ENST00000533789 RTF1Q92541 710 aaKnown RBP24.57■■□□□ 1.52
HIF3A-216ENST00000533789 BCL2L12Q9HB09 334 aa24.57■■□□□ 1.52
HIF3A-216ENST00000533789 A0A087WZG4 1122 aa24.56■■□□□ 1.52
HIF3A-216ENST00000533789 GPBP1L1Q9HC44 474 aaPredicted RBP24.56■■□□□ 1.52
HIF3A-216ENST00000533789 ARFGEF2Q9Y6D5 1785 aa24.55■■□□□ 1.52
HIF3A-216ENST00000533789 PIM2Q9P1W9 311 aa24.55■■□□□ 1.52
HIF3A-216ENST00000533789 MCM10Q7L590 875 aa24.54■■□□□ 1.52
HIF3A-216ENST00000533789 KCNQ3O43525 872 aa24.53■■□□□ 1.52
HIF3A-216ENST00000533789 HTATSF1O43719 755 aaKnown RBP24.53■■□□□ 1.52
HIF3A-216ENST00000533789 IL6STP40189 918 aaPredicted RBP24.52■■□□□ 1.52
HIF3A-216ENST00000533789 SENP3-EIF4A1A0A087X0R7 540 aa24.51■■□□□ 1.51
HIF3A-216ENST00000533789 SERPINB2P05120 415 aa24.51■■□□□ 1.51
HIF3A-216ENST00000533789 CHRNA5P30532 468 aa24.51■■□□□ 1.51
HIF3A-216ENST00000533789 DALRD3Q5D0E6 543 aaKnown RBP24.51■■□□□ 1.51
HIF3A-216ENST00000533789 ARHGAP27Q6ZUM4 889 aa24.51■■□□□ 1.51
HIF3A-216ENST00000533789 ZNF526Q8TF50 670 aaPredicted RBP24.51■■□□□ 1.51
HIF3A-216ENST00000533789 ZNF330Q9Y3S2 320 aaPredicted RBP24.51■■□□□ 1.51
HIF3A-216ENST00000533789 TIAM2Q8IVF5 1701 aa24.51■■□□□ 1.51
HIF3A-216ENST00000533789 DICER1Q9UPY3 1922 aaKnown RBP24.51■■□□□ 1.51
HIF3A-216ENST00000533789 NUP98P52948 1817 aa24.5■■□□□ 1.51
HIF3A-216ENST00000533789 CARMIL3Q8ND23 1372 aa24.5■■□□□ 1.51
HIF3A-216ENST00000533789 TNRC6CQ9HCJ0 1690 aaKnown RBP24.5■■□□□ 1.51
HIF3A-216ENST00000533789 A1BGP04217 495 aa24.49■■□□□ 1.51
HIF3A-216ENST00000533789 NEFMP07197 916 aa24.49■■□□□ 1.51
HIF3A-216ENST00000533789 DCTN1Q14203 1278 aa24.49■■□□□ 1.51
HIF3A-216ENST00000533789 FER1L6Q2WGJ9 1857 aa24.49■■□□□ 1.51
HIF3A-216ENST00000533789 BICDL1Q6ZP65 573 aa24.47■■□□□ 1.51
HIF3A-216ENST00000533789 TBC1D2BQ9UPU7 963 aa24.47■■□□□ 1.51
HIF3A-216ENST00000533789 SNRPA1P09661 255 aaKnown RBP24.46■■□□□ 1.51
HIF3A-216ENST00000533789 TBC1D9BQ66K14 1250 aa24.46■■□□□ 1.51
HIF3A-216ENST00000533789 NPM2Q86SE8 214 aaKnown RBP24.46■■□□□ 1.51
HIF3A-216ENST00000533789 PLEKHF1Q96S99 279 aa24.46■■□□□ 1.51
HIF3A-216ENST00000533789 USP16Q9Y5T5 823 aa24.46■■□□□ 1.51
HIF3A-216ENST00000533789 PRAMEF22A3QJZ6 481 aa24.45■■□□□ 1.5
HIF3A-216ENST00000533789 CAMTA2O94983 1202 aa24.44■■□□□ 1.5
HIF3A-216ENST00000533789 TAF7Q15545 349 aaPredicted RBP24.44■■□□□ 1.5
HIF3A-216ENST00000533789 RALBP1Q15311 655 aa24.43■■□□□ 1.5
HIF3A-216ENST00000533789 SLX4Q8IY92 1834 aa24.42■■□□□ 1.5
HIF3A-216ENST00000533789 DZIP3Q86Y13 1208 aaKnown RBP24.42■■□□□ 1.5
HIF3A-216ENST00000533789 MAPK8IP3Q9UPT6 1336 aa24.41■■□□□ 1.5
HIF3A-216ENST00000533789 PIP4K2AP48426 406 aaPredicted RBP24.41■■□□□ 1.5
HIF3A-216ENST00000533789 NFE2L2Q16236 605 aa24.41■■□□□ 1.5
HIF3A-216ENST00000533789 C9orf131Q5VYM1 1079 aa24.41■■□□□ 1.5
HIF3A-216ENST00000533789 PNNQ9H307 717 aaKnown RBP24.41■■□□□ 1.5
HIF3A-216ENST00000533789 CEP350Q5VT06 3117 aa24.41■■□□□ 1.5
HIF3A-216ENST00000533789 KIF3CO14782 793 aa24.4■■□□□ 1.5
HIF3A-216ENST00000533789 PRR5LQ6MZQ0 368 aa24.4■■□□□ 1.5
HIF3A-216ENST00000533789 C2CD5Q86YS7 1000 aa24.4■■□□□ 1.5
HIF3A-216ENST00000533789 PNISRQ8TF01 805 aaKnown RBP24.39■■□□□ 1.49
HIF3A-216ENST00000533789 H0YIN7 160 aa24.38■■□□□ 1.49
HIF3A-216ENST00000533789 TTLL6Q8N841 843 aa24.38■■□□□ 1.49
HIF3A-216ENST00000533789 SETDB2Q96T68 719 aa24.38■■□□□ 1.49
HIF3A-216ENST00000533789 PDE6BP35913 854 aa24.37■■□□□ 1.49
HIF3A-216ENST00000533789 CNBD1Q8NA66 436 aa24.37■■□□□ 1.49
HIF3A-216ENST00000533789 BRIP1Q9BX63 1249 aa24.37■■□□□ 1.49
HIF3A-216ENST00000533789 MIS18AQ9NYP9 233 aa24.37■■□□□ 1.49
HIF3A-216ENST00000533789 RNF181Q9P0P0 153 aa24.37■■□□□ 1.49
HIF3A-216ENST00000533789 PDZRN3Q9UPQ7 1066 aa24.37■■□□□ 1.49
HIF3A-216ENST00000533789 NBPF26B4DH59 902 aa24.36■■□□□ 1.49
HIF3A-216ENST00000533789 NBPF10Q6P3W6 841 aaKnown RBP24.36■■□□□ 1.49
HIF3A-216ENST00000533789 CLEC4GQ6UXB4 293 aa24.36■■□□□ 1.49
HIF3A-216ENST00000533789 NBPF15Q8N660 670 aa24.36■■□□□ 1.49
HIF3A-216ENST00000533789 ZNF652Q9Y2D9 606 aa24.36■■□□□ 1.49
HIF3A-216ENST00000533789 ANKRD36CQ5JPF3 1778 aa24.35■■□□□ 1.49
HIF3A-216ENST00000533789 DDX10Q13206 875 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms