RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 VIRMAQ69YN4 1812 aaKnown RBP17.16■□□□□ 0.34
SVIP-205ENST00000533774 PTCD1O75127 700 aaKnown RBP17.15■□□□□ 0.34
SVIP-205ENST00000533774 EIF4A2Q14240 407 aaKnown RBP17.15■□□□□ 0.34
SVIP-205ENST00000533774 SCN11AQ9UI33 1791 aa17.15■□□□□ 0.34
SVIP-205ENST00000533774 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
SVIP-205ENST00000533774 ZC3H4Q9UPT8 1303 aaKnown RBP17.14■□□□□ 0.33
SVIP-205ENST00000533774 LMNB1P20700 586 aa17.13■□□□□ 0.33
SVIP-205ENST00000533774 INTS5Q6P9B9 1019 aaKnown RBP17.13■□□□□ 0.33
SVIP-205ENST00000533774 FER1L6Q2WGJ9 1857 aa17.13■□□□□ 0.33
SVIP-205ENST00000533774 ANKRD31Q8N7Z5 1873 aa17.13■□□□□ 0.33
SVIP-205ENST00000533774 NFKBIEO00221 500 aa17.11■□□□□ 0.33
SVIP-205ENST00000533774 CABP4P57796 275 aa17.11■□□□□ 0.33
SVIP-205ENST00000533774 CACNA1SQ13698 1873 aa17.1■□□□□ 0.33
SVIP-205ENST00000533774 SLC34A2O95436 690 aa17.1■□□□□ 0.33
SVIP-205ENST00000533774 USPL1Q5W0Q7 1092 aa17.1■□□□□ 0.33
SVIP-205ENST00000533774 FOXN1O15353 648 aa17.09■□□□□ 0.33
SVIP-205ENST00000533774 ZNF530Q6P9A1 599 aaPredicted RBP17.09■□□□□ 0.33
SVIP-205ENST00000533774 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
SVIP-205ENST00000533774 MKRN1Q9UHC7 482 aaKnown RBP17.09■□□□□ 0.33
SVIP-205ENST00000533774 COL11A2P13942 1736 aaPredicted RBP17.08■□□□□ 0.32
SVIP-205ENST00000533774 CARMIL3Q8ND23 1372 aa17.08■□□□□ 0.32
SVIP-205ENST00000533774 HSP90AB1P08238 724 aaKnown RBP17.08■□□□□ 0.32
SVIP-205ENST00000533774 POTEIP0CG38 1075 aa17.08■□□□□ 0.32
SVIP-205ENST00000533774 POTEJP0CG39 1038 aa17.08■□□□□ 0.32
SVIP-205ENST00000533774 NFIXQ14938 502 aa17.08■□□□□ 0.32
SVIP-205ENST00000533774 DNAJC10Q8IXB1 793 aa17.07■□□□□ 0.32
SVIP-205ENST00000533774 BCL2L12Q9HB09 334 aa17.07■□□□□ 0.32
SVIP-205ENST00000533774 SOS1Q07889 1333 aaPredicted RBP17.06■□□□□ 0.32
SVIP-205ENST00000533774 TNNT2P45379 298 aaPredicted RBP17.06■□□□□ 0.32
SVIP-205ENST00000533774 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
SVIP-205ENST00000533774 AEBP1Q8IUX7 1158 aa17.06■□□□□ 0.32
SVIP-205ENST00000533774 TTLL6Q8N841 843 aa17.06■□□□□ 0.32
SVIP-205ENST00000533774 MTHFSP49914 203 aa17.05■□□□□ 0.32
SVIP-205ENST00000533774 CREBZFQ9NS37 354 aa17.05■□□□□ 0.32
SVIP-205ENST00000533774 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
SVIP-205ENST00000533774 ZPR1O75312 459 aa17.04■□□□□ 0.32
SVIP-205ENST00000533774 C2CD5Q86YS7 1000 aa17.04■□□□□ 0.32
SVIP-205ENST00000533774 SERPINB2P05120 415 aa17.03■□□□□ 0.32
SVIP-205ENST00000533774 CHADLQ6NUI6 762 aa17.03■□□□□ 0.32
SVIP-205ENST00000533774 NARFQ9UHQ1 456 aa17.03■□□□□ 0.32
SVIP-205ENST00000533774 CNTNAP1P78357 1384 aa17.02■□□□□ 0.32
SVIP-205ENST00000533774 CYP19A1P11511 503 aaPredicted RBP17.02■□□□□ 0.32
SVIP-205ENST00000533774 CDCA8Q53HL2 280 aa17.02■□□□□ 0.32
SVIP-205ENST00000533774 PRDM10Q9NQV6 1147 aa17.02■□□□□ 0.32
SVIP-205ENST00000533774 COL15A1P39059 1388 aa17.02■□□□□ 0.31
SVIP-205ENST00000533774 AMOTQ4VCS5 1084 aa17.01■□□□□ 0.31
SVIP-205ENST00000533774 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
SVIP-205ENST00000533774 ZBTB1Q9Y2K1 713 aa17.01■□□□□ 0.31
SVIP-205ENST00000533774 SCN4AP35499 1836 aa17■□□□□ 0.31
SVIP-205ENST00000533774 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
SVIP-205ENST00000533774 DPY19L2Q6NUT2 758 aa17■□□□□ 0.31
SVIP-205ENST00000533774 UBR2Q8IWV8 1755 aa17■□□□□ 0.31
SVIP-205ENST00000533774 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
SVIP-205ENST00000533774 PASKQ96RG2 1323 aa16.99■□□□□ 0.31
SVIP-205ENST00000533774 H0YIN7 160 aa16.99■□□□□ 0.31
SVIP-205ENST00000533774 DDNO94850 711 aaPredicted RBP16.99■□□□□ 0.31
SVIP-205ENST00000533774 VEGFBP49765 207 aa16.99■□□□□ 0.31
SVIP-205ENST00000533774 SLC39A6Q13433 755 aa16.99■□□□□ 0.31
SVIP-205ENST00000533774 ERFEQ4G0M1 354 aa16.99■□□□□ 0.31
SVIP-205ENST00000533774 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
SVIP-205ENST00000533774 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
SVIP-205ENST00000533774 C21orf2O43822 256 aa16.98■□□□□ 0.31
SVIP-205ENST00000533774 CCDC24Q8N4L8 307 aa16.98■□□□□ 0.31
SVIP-205ENST00000533774 LGR6Q9HBX8 967 aa16.98■□□□□ 0.31
SVIP-205ENST00000533774 CTCFP49711 727 aaPredicted RBP16.97■□□□□ 0.31
SVIP-205ENST00000533774 MRC1P22897 1456 aa16.97■□□□□ 0.31
SVIP-205ENST00000533774 ADAMTSL1Q8N6G6 1762 aa16.97■□□□□ 0.31
SVIP-205ENST00000533774 LBX1P52954 281 aa16.96■□□□□ 0.31
SVIP-205ENST00000533774 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
SVIP-205ENST00000533774 BICDL1Q6ZP65 573 aa16.96■□□□□ 0.31
SVIP-205ENST00000533774 ZNF622Q969S3 477 aaKnown RBP eCLIP16.96■□□□□ 0.311e-6■■□□□ 14.2
SVIP-205ENST00000533774 WBP1LQ9NX94 342 aa16.96■□□□□ 0.31
SVIP-205ENST00000533774 SCN7AQ01118 1682 aa16.96■□□□□ 0.31
SVIP-205ENST00000533774 SLC52A2Q9HAB3 445 aa16.95■□□□□ 0.3
SVIP-205ENST00000533774 ITGBL1O95965 494 aaPredicted RBP16.94■□□□□ 0.3
SVIP-205ENST00000533774 TBC1D9BQ66K14 1250 aa16.94■□□□□ 0.3
SVIP-205ENST00000533774 SULT6B1Q6IMI4 303 aa16.94■□□□□ 0.3
SVIP-205ENST00000533774 ABHD8Q96I13 439 aa16.94■□□□□ 0.3
SVIP-205ENST00000533774 LTBP3Q9NS15 1303 aa16.94■□□□□ 0.3
SVIP-205ENST00000533774 HSPA8P11142 646 aaKnown RBP16.92■□□□□ 0.3
SVIP-205ENST00000533774 CANXP27824 592 aaKnown RBP16.92■□□□□ 0.3
SVIP-205ENST00000533774 PRR5LQ6MZQ0 368 aa16.92■□□□□ 0.3
SVIP-205ENST00000533774 TAF1DQ9H5J8 278 aaPredicted RBP16.92■□□□□ 0.3
SVIP-205ENST00000533774 RNMTO43148 476 aaKnown RBP16.91■□□□□ 0.3
SVIP-205ENST00000533774 EIF5P55010 431 aaKnown RBP16.91■□□□□ 0.3
SVIP-205ENST00000533774 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
SVIP-205ENST00000533774 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
SVIP-205ENST00000533774 LDHDQ86WU2 507 aa16.91■□□□□ 0.3
SVIP-205ENST00000533774 AIDAQ96BJ3 306 aa16.91■□□□□ 0.3
SVIP-205ENST00000533774 BRIP1Q9BX63 1249 aa16.91■□□□□ 0.3
SVIP-205ENST00000533774 TAOK3Q9H2K8 898 aa16.91■□□□□ 0.3
SVIP-205ENST00000533774 TMEM88BA6NKF7 163 aa16.9■□□□□ 0.3
SVIP-205ENST00000533774 L3MBTL3Q96JM7 780 aaPredicted RBP16.9■□□□□ 0.3
SVIP-205ENST00000533774 BCORQ6W2J9 1755 aa16.89■□□□□ 0.3
SVIP-205ENST00000533774 IL13P35225 146 aa16.89■□□□□ 0.29
SVIP-205ENST00000533774 PDE6BP35913 854 aa16.89■□□□□ 0.29
SVIP-205ENST00000533774 SIPA1L3O60292 1781 aaPredicted RBP16.88■□□□□ 0.29
SVIP-205ENST00000533774 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
SVIP-205ENST00000533774 ZNF541Q9H0D2 1346 aa16.88■□□□□ 0.29
SVIP-205ENST00000533774 RASSF10A6NK89 507 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms