RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 AMPHP49418 695 aa20.12■□□□□ 0.81
CTSB-228ENST00000533455 XPCQ01831 940 aaPredicted RBP20.11■□□□□ 0.81
CTSB-228ENST00000533455 UPF3BQ9BZI7 483 aaKnown RBP20.11■□□□□ 0.81
CTSB-228ENST00000533455 R3HCC1Q9Y3T6 440 aaKnown RBP20.11■□□□□ 0.81
CTSB-228ENST00000533455 RPAP1Q9BWH6 1393 aaPredicted RBP20.11■□□□□ 0.81
CTSB-228ENST00000533455 UBTFL1P0CB47 393 aaPredicted RBP20.1■□□□□ 0.81
CTSB-228ENST00000533455 POLA2Q14181 598 aa20.1■□□□□ 0.81
CTSB-228ENST00000533455 NOL8Q76FK4 1167 aaKnown RBP20.1■□□□□ 0.81
CTSB-228ENST00000533455 IL25Q9H293 177 aa20.1■□□□□ 0.81
CTSB-228ENST00000533455 RAD50Q92878 1312 aa20.1■□□□□ 0.81
CTSB-228ENST00000533455 UVSSAQ2YD98 709 aa20.09■□□□□ 0.81
CTSB-228ENST00000533455 FAM184AQ8NB25 1140 aa20.09■□□□□ 0.81
CTSB-228ENST00000533455 RNF214Q8ND24 703 aa20.09■□□□□ 0.81
CTSB-228ENST00000533455 PI4K2BQ8TCG2 481 aa20.09■□□□□ 0.81
CTSB-228ENST00000533455 SGSM2O43147 1006 aa20.08■□□□□ 0.8
CTSB-228ENST00000533455 LTKP29376 864 aa20.08■□□□□ 0.8
CTSB-228ENST00000533455 USP48Q86UV5 1035 aa20.08■□□□□ 0.8
CTSB-228ENST00000533455 GADD45BO75293 160 aaPredicted RBP20.07■□□□□ 0.8
CTSB-228ENST00000533455 TAF7Q15545 349 aaPredicted RBP20.07■□□□□ 0.8
CTSB-228ENST00000533455 IL17REQ8NFR9 667 aa20.07■□□□□ 0.8
CTSB-228ENST00000533455 TTC14Q96N46 770 aa20.07■□□□□ 0.8
CTSB-228ENST00000533455 IL1RAPL2Q9NP60 686 aa20.07■□□□□ 0.8
CTSB-228ENST00000533455 MED1Q15648 1581 aaPredicted RBP20.07■□□□□ 0.8
CTSB-228ENST00000533455 NECTIN2Q92692 538 aa20.07■□□□□ 0.8
CTSB-228ENST00000533455 MAP7D2Q96T17 732 aa20.07■□□□□ 0.8
CTSB-228ENST00000533455 KDM3BQ7LBC6 1761 aa20.06■□□□□ 0.8
CTSB-228ENST00000533455 NUTM1Q86Y26 1132 aa20.06■□□□□ 0.8
CTSB-228ENST00000533455 KLHL34Q8N239 644 aa20.06■□□□□ 0.8
CTSB-228ENST00000533455 SNX14Q9Y5W7 946 aa20.06■□□□□ 0.8
CTSB-228ENST00000533455 RHPN1Q8TCX5 695 aa20.05■□□□□ 0.8
CTSB-228ENST00000533455 LSG1Q9H089 658 aaKnown RBP20.05■□□□□ 0.8
CTSB-228ENST00000533455 USP42Q9H9J4 1324 aaKnown RBP20.05■□□□□ 0.8
CTSB-228ENST00000533455 HOXC9P31274 260 aa20.05■□□□□ 0.8
CTSB-228ENST00000533455 PPP1R42Q7Z4L9 355 aa20.05■□□□□ 0.8
CTSB-228ENST00000533455 NGDNQ8NEJ9 315 aaKnown RBP20.05■□□□□ 0.8
CTSB-228ENST00000533455 UQCRHLA0A096LP55 91 aa20.04■□□□□ 0.8
CTSB-228ENST00000533455 UQCRHP07919 91 aa20.04■□□□□ 0.8
CTSB-228ENST00000533455 CCDC183Q5T5S1 534 aa20.04■□□□□ 0.8
CTSB-228ENST00000533455 SASS6Q6UVJ0 657 aa20.04■□□□□ 0.8
CTSB-228ENST00000533455 VSIG10Q8N0Z9 540 aa20.04■□□□□ 0.8
CTSB-228ENST00000533455 KIF1BPQ96EK5 621 aa20.04■□□□□ 0.8
CTSB-228ENST00000533455 GDPD2Q9HCC8 539 aa20.04■□□□□ 0.8
CTSB-228ENST00000533455 ANKARQ7Z5J8 1434 aa20.04■□□□□ 0.8
CTSB-228ENST00000533455 SLIT1O75093 1534 aa20.04■□□□□ 0.8
CTSB-228ENST00000533455 SURF6O75683 361 aaKnown RBP20.03■□□□□ 0.8
CTSB-228ENST00000533455 ZSCAN22P10073 491 aaPredicted RBP20.03■□□□□ 0.8
CTSB-228ENST00000533455 HDGFL1Q5TGJ6 251 aa20.03■□□□□ 0.8
CTSB-228ENST00000533455 CNTROBQ8N137 903 aa20.03■□□□□ 0.8
CTSB-228ENST00000533455 LETM1O95202 739 aaPredicted RBP20.03■□□□□ 0.8
CTSB-228ENST00000533455 ARHGAP23Q9P227 1491 aa20.02■□□□□ 0.8
CTSB-228ENST00000533455 DYNC1I1O14576 645 aa20.02■□□□□ 0.8
CTSB-228ENST00000533455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.02■□□□□ 0.82e-8■■■□□ 14.9
CTSB-228ENST00000533455 PTMAP06454 111 aaKnown RBP20.02■□□□□ 0.79
CTSB-228ENST00000533455 KIAA2012Q0VF49 1180 aa20.02■□□□□ 0.79
CTSB-228ENST00000533455 PHAXQ9H814 394 aaKnown RBP20.02■□□□□ 0.79
CTSB-228ENST00000533455 LIMCH1Q9UPQ0 1083 aa20.02■□□□□ 0.79
CTSB-228ENST00000533455 AMOTL2Q9Y2J4 779 aa20.02■□□□□ 0.79
CTSB-228ENST00000533455 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.02■□□□□ 0.79
CTSB-228ENST00000533455 CHD2O14647 1828 aaKnown RBP20.01■□□□□ 0.79
CTSB-228ENST00000533455 CEMIPQ8WUJ3 1361 aa20.01■□□□□ 0.79
CTSB-228ENST00000533455 AK2P54819 239 aa20.01■□□□□ 0.79
CTSB-228ENST00000533455 HOXB7P09629 217 aa20■□□□□ 0.79
CTSB-228ENST00000533455 UBE2HP62256 183 aa20■□□□□ 0.79
CTSB-228ENST00000533455 HSP90AB4PQ58FF6 505 aa20■□□□□ 0.79
CTSB-228ENST00000533455 TTC41PQ6P2S7 1318 aa20■□□□□ 0.79
CTSB-228ENST00000533455 STX6O43752 255 aa20■□□□□ 0.79
CTSB-228ENST00000533455 RUFY3Q7L099 469 aa20■□□□□ 0.79
CTSB-228ENST00000533455 SLC26A8Q96RN1 970 aa20■□□□□ 0.79
CTSB-228ENST00000533455 CNPY2Q9Y2B0 182 aa20■□□□□ 0.79
CTSB-228ENST00000533455 LTN1O94822 1766 aa19.99■□□□□ 0.79
CTSB-228ENST00000533455 SRGAP3O43295 1099 aa19.99■□□□□ 0.79
CTSB-228ENST00000533455 MAP4K4O95819 1239 aaPredicted RBP19.99■□□□□ 0.79
CTSB-228ENST00000533455 NLRP6P59044 892 aa19.99■□□□□ 0.79
CTSB-228ENST00000533455 FOXD4L6Q3SYB3 417 aaPredicted RBP19.99■□□□□ 0.79
CTSB-228ENST00000533455 FOXD4L3Q6VB84 417 aaPredicted RBP19.99■□□□□ 0.79
CTSB-228ENST00000533455 RASEFQ8IZ41 740 aa19.99■□□□□ 0.79
CTSB-228ENST00000533455 TBX22Q9Y458 520 aa19.99■□□□□ 0.79
CTSB-228ENST00000533455 F13A1P00488 732 aa19.98■□□□□ 0.79
CTSB-228ENST00000533455 SYT1P21579 422 aa19.98■□□□□ 0.79
CTSB-228ENST00000533455 ATP6V1DQ9Y5K8 247 aa19.98■□□□□ 0.79
CTSB-228ENST00000533455 RBM10P98175 930 aaKnown RBP19.98■□□□□ 0.79
CTSB-228ENST00000533455 BEND3Q5T5X7 828 aa19.98■□□□□ 0.79
CTSB-228ENST00000533455 MTERF4Q7Z6M4 381 aaKnown RBP19.98■□□□□ 0.79
CTSB-228ENST00000533455 CHMP4AQ9BY43 222 aa19.98■□□□□ 0.79
CTSB-228ENST00000533455 LMO7Q8WWI1 1683 aa19.98■□□□□ 0.79
CTSB-228ENST00000533455 SMC3Q9UQE7 1217 aa19.97■□□□□ 0.79
CTSB-228ENST00000533455 EID1Q9Y6B2 187 aa19.97■□□□□ 0.79
CTSB-228ENST00000533455 GLRX3O76003 335 aaKnown RBP19.97■□□□□ 0.79
CTSB-228ENST00000533455 DNAAF4Q8WXU2 420 aa19.97■□□□□ 0.79
CTSB-228ENST00000533455 KCNB2Q92953 911 aa19.97■□□□□ 0.79
CTSB-228ENST00000533455 NBPF7P0C2Y1 421 aaPredicted RBP19.96■□□□□ 0.79
CTSB-228ENST00000533455 ZMYND15Q9H091 742 aa19.96■□□□□ 0.79
CTSB-228ENST00000533455 EIF4A1P60842 406 aaKnown RBP19.95■□□□□ 0.78
CTSB-228ENST00000533455 MTX1Q13505 466 aa19.95■□□□□ 0.78
CTSB-228ENST00000533455 RUFY2Q8WXA3 655 aa19.95■□□□□ 0.78
CTSB-228ENST00000533455 PIBF1Q8WXW3 757 aa19.95■□□□□ 0.78
CTSB-228ENST00000533455 TM6SF1Q9BZW5 370 aa19.95■□□□□ 0.78
CTSB-228ENST00000533455 HYPKQ9NX55 129 aa19.95■□□□□ 0.78
CTSB-228ENST00000533455 FAM13BQ9NYF5 915 aa19.95■□□□□ 0.78
CTSB-228ENST00000533455 USP25Q9UHP3 1055 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms