RNA–Protein interactions for RNA: ENST00000533398.5

VAV3-215, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-215ENST00000533398 RFC4P35249 363 aa12.31□□□□□ -0.44
VAV3-215ENST00000533398 SRP68Q9UHB9 627 aaKnown RBP12.31□□□□□ -0.44
VAV3-215ENST00000533398 CNTNAP4Q9C0A0 1308 aa12.31□□□□□ -0.44
VAV3-215ENST00000533398 C10orf71Q711Q0 1435 aa12.3□□□□□ -0.44
VAV3-215ENST00000533398 BRCA1P38398 1863 aaKnown RBP12.3□□□□□ -0.44
VAV3-215ENST00000533398 RPS6KA4O75676 772 aa12.3□□□□□ -0.44
VAV3-215ENST00000533398 CRKLP46109 303 aaKnown RBP12.3□□□□□ -0.44
VAV3-215ENST00000533398 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
VAV3-215ENST00000533398 RC3H1Q5TC82 1133 aaKnown RBP12.3□□□□□ -0.44
VAV3-215ENST00000533398 LGR6Q9HBX8 967 aa12.3□□□□□ -0.44
VAV3-215ENST00000533398 GPBP1L1Q9HC44 474 aaPredicted RBP12.3□□□□□ -0.44
VAV3-215ENST00000533398 NLGN1Q8N2Q7 840 aa12.29□□□□□ -0.44
VAV3-215ENST00000533398 BCS1LQ9Y276 419 aa12.29□□□□□ -0.44
VAV3-215ENST00000533398 ADAMTS7Q9UKP4 1686 aa12.29□□□□□ -0.44
VAV3-215ENST00000533398 DPEP1P16444 411 aa12.28□□□□□ -0.44
VAV3-215ENST00000533398 SLC39A6Q13433 755 aa12.28□□□□□ -0.44
VAV3-215ENST00000533398 FKBP8Q14318 412 aa12.28□□□□□ -0.44
VAV3-215ENST00000533398 DNAJC10Q8IXB1 793 aa12.28□□□□□ -0.44
VAV3-215ENST00000533398 ZEB1P37275 1124 aaPredicted RBP12.27□□□□□ -0.45
VAV3-215ENST00000533398 DDR1Q08345 913 aa12.27□□□□□ -0.45
VAV3-215ENST00000533398 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.45
VAV3-215ENST00000533398 INTS5Q6P9B9 1019 aaKnown RBP12.27□□□□□ -0.45
VAV3-215ENST00000533398 CCDC87Q9NVE4 849 aa12.27□□□□□ -0.45
VAV3-215ENST00000533398 PARP3Q9Y6F1 533 aa12.27□□□□□ -0.45
VAV3-215ENST00000533398 RNMTO43148 476 aaKnown RBP12.26□□□□□ -0.45
VAV3-215ENST00000533398 TGFB2P61812 414 aa12.26□□□□□ -0.45
VAV3-215ENST00000533398 MTHFSDQ2M296 383 aaKnown RBP12.26□□□□□ -0.45
VAV3-215ENST00000533398 SLC52A2Q9HAB3 445 aa12.26□□□□□ -0.45
VAV3-215ENST00000533398 USP42Q9H9J4 1324 aaKnown RBP12.26□□□□□ -0.45
VAV3-215ENST00000533398 MRC1P22897 1456 aa12.26□□□□□ -0.45
VAV3-215ENST00000533398 KCPQ6ZWJ8 1503 aa12.26□□□□□ -0.45
VAV3-215ENST00000533398 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
VAV3-215ENST00000533398 FCHSD2O94868 740 aa12.25□□□□□ -0.45
VAV3-215ENST00000533398 KCNA3P22001 575 aa12.25□□□□□ -0.45
VAV3-215ENST00000533398 ARHGAP27Q6ZUM4 889 aa12.25□□□□□ -0.45
VAV3-215ENST00000533398 ARFGEF1Q9Y6D6 1849 aa12.25□□□□□ -0.45
VAV3-215ENST00000533398 DIAPH1O60610 1272 aaKnown RBP12.24□□□□□ -0.45
VAV3-215ENST00000533398 CHRNA5P30532 468 aa12.24□□□□□ -0.45
VAV3-215ENST00000533398 AFDNP55196 1824 aaKnown RBP12.24□□□□□ -0.45
VAV3-215ENST00000533398 USPL1Q5W0Q7 1092 aa12.24□□□□□ -0.45
VAV3-215ENST00000533398 UBR2Q8IWV8 1755 aa12.23□□□□□ -0.45
VAV3-215ENST00000533398 COL3A1P02461 1466 aaPredicted RBP12.23□□□□□ -0.45
VAV3-215ENST00000533398 KIF3CO14782 793 aa12.23□□□□□ -0.45
VAV3-215ENST00000533398 CYP19A1P11511 503 aaPredicted RBP12.23□□□□□ -0.45
VAV3-215ENST00000533398 SOS1Q07889 1333 aaPredicted RBP12.22□□□□□ -0.45
VAV3-215ENST00000533398 U2SURPO15042 1029 aaKnown RBP12.22□□□□□ -0.45
VAV3-215ENST00000533398 ZBTB1Q9Y2K1 713 aa12.22□□□□□ -0.45
VAV3-215ENST00000533398 COL15A1P39059 1388 aa12.21□□□□□ -0.45
VAV3-215ENST00000533398 POLRMTO00411 1230 aaKnown RBP12.21□□□□□ -0.45
VAV3-215ENST00000533398 ZPR1O75312 459 aa12.21□□□□□ -0.45
VAV3-215ENST00000533398 TM4SF1P30408 202 aa12.21□□□□□ -0.45
VAV3-215ENST00000533398 SIPA1L3O60292 1781 aaPredicted RBP12.2□□□□□ -0.46
VAV3-215ENST00000533398 HSPA6P17066 643 aa12.2□□□□□ -0.46
VAV3-215ENST00000533398 CANXP27824 592 aaKnown RBP12.2□□□□□ -0.46
VAV3-215ENST00000533398 C9orf131Q5VYM1 1079 aa12.2□□□□□ -0.46
VAV3-215ENST00000533398 NMRK2Q9NPI5 230 aa12.2□□□□□ -0.46
VAV3-215ENST00000533398 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
VAV3-215ENST00000533398 SBF1O95248 1867 aa12.19□□□□□ -0.46
VAV3-215ENST00000533398 NFIXQ14938 502 aa12.19□□□□□ -0.46
VAV3-215ENST00000533398 DALRD3Q5D0E6 543 aaKnown RBP12.19□□□□□ -0.46
VAV3-215ENST00000533398 BCL2L12Q9HB09 334 aa12.19□□□□□ -0.46
VAV3-215ENST00000533398 NRXN2Q9P2S2 1712 aa12.19□□□□□ -0.46
VAV3-215ENST00000533398 DLEC1Q9Y238 1755 aa12.18□□□□□ -0.46
VAV3-215ENST00000533398 BICDL1Q6ZP65 573 aa12.18□□□□□ -0.46
VAV3-215ENST00000533398 IL17REQ8NFR9 667 aa12.18□□□□□ -0.46
VAV3-215ENST00000533398 NARFQ9UHQ1 456 aa12.18□□□□□ -0.46
VAV3-215ENST00000533398 CARMIL3Q8ND23 1372 aa12.18□□□□□ -0.46
VAV3-215ENST00000533398 LHX8Q68G74 356 aa12.17□□□□□ -0.46
VAV3-215ENST00000533398 TTC5Q8N0Z6 440 aa12.17□□□□□ -0.46
VAV3-215ENST00000533398 ZNF496Q96IT1 587 aaPredicted RBP12.17□□□□□ -0.46
VAV3-215ENST00000533398 ZNF330Q9Y3S2 320 aaPredicted RBP12.17□□□□□ -0.46
VAV3-215ENST00000533398 GNAT3A8MTJ3 354 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 KCNQ3O43525 872 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 SERPINB2P05120 415 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 RASSF7Q02833 373 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 TEFQ10587 303 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 CCDC24Q8N4L8 307 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 PHACTR3Q96KR7 559 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 RNF181Q9P0P0 153 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 CCDC88AQ3V6T2 1871 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 ANKRD31Q8N7Z5 1873 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 NPC1L1Q9UHC9 1359 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 SCN7AQ01118 1682 aa12.16□□□□□ -0.46
VAV3-215ENST00000533398 PRKAR2BP31323 418 aa12.15□□□□□ -0.46
VAV3-215ENST00000533398 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
VAV3-215ENST00000533398 HEG1Q9ULI3 1381 aa12.15□□□□□ -0.46
VAV3-215ENST00000533398 COL11A2P13942 1736 aaPredicted RBP12.14□□□□□ -0.47
VAV3-215ENST00000533398 PIP4K2AP48426 406 aaPredicted RBP12.14□□□□□ -0.47
VAV3-215ENST00000533398 EIF5P55010 431 aaKnown RBP12.14□□□□□ -0.47
VAV3-215ENST00000533398 ZNF790Q6PG37 636 aa12.14□□□□□ -0.47
VAV3-215ENST00000533398 GAS2L2Q8NHY3 880 aa12.14□□□□□ -0.47
VAV3-215ENST00000533398 TBC1D2BQ9UPU7 963 aa12.14□□□□□ -0.47
VAV3-215ENST00000533398 CACNA1SQ13698 1873 aa12.14□□□□□ -0.47
VAV3-215ENST00000533398 TOMM70O94826 608 aa12.13□□□□□ -0.47
VAV3-215ENST00000533398 STARD3NLO95772 234 aa12.13□□□□□ -0.47
VAV3-215ENST00000533398 A1BGP04217 495 aa12.13□□□□□ -0.47
VAV3-215ENST00000533398 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
VAV3-215ENST00000533398 PRELPP51888 382 aa12.13□□□□□ -0.47
VAV3-215ENST00000533398 TBC1D9BQ66K14 1250 aa12.13□□□□□ -0.47
VAV3-215ENST00000533398 C2CD5Q86YS7 1000 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms