RNA–Protein interactions for RNA: ENST00000533039.2

SOX9-AS1-210, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 426 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-210ENST00000533039 C10orf71Q711Q0 1435 aa11.69□□□□□ -0.54
SOX9-AS1-210ENST00000533039 COL15A1P39059 1388 aa11.68□□□□□ -0.54
SOX9-AS1-210ENST00000533039 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
SOX9-AS1-210ENST00000533039 FCHSD2O94868 740 aa11.68□□□□□ -0.54
SOX9-AS1-210ENST00000533039 NEFMP07197 916 aa11.68□□□□□ -0.54
SOX9-AS1-210ENST00000533039 ZNF790Q6PG37 636 aa11.68□□□□□ -0.54
SOX9-AS1-210ENST00000533039 IL17REQ8NFR9 667 aa11.68□□□□□ -0.54
SOX9-AS1-210ENST00000533039 TEX13AQ9BXU3 409 aaPredicted RBP11.68□□□□□ -0.54
SOX9-AS1-210ENST00000533039 SRP68Q9UHB9 627 aaKnown RBP11.68□□□□□ -0.54
SOX9-AS1-210ENST00000533039 FKBP8Q14318 412 aa11.67□□□□□ -0.54
SOX9-AS1-210ENST00000533039 RTF1Q92541 710 aaKnown RBP11.67□□□□□ -0.54
SOX9-AS1-210ENST00000533039 PHACTR3Q96KR7 559 aa11.67□□□□□ -0.54
SOX9-AS1-210ENST00000533039 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
SOX9-AS1-210ENST00000533039 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
SOX9-AS1-210ENST00000533039 A0A0G2JLW4 131 aa11.66□□□□□ -0.54
SOX9-AS1-210ENST00000533039 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
SOX9-AS1-210ENST00000533039 NPM2Q86SE8 214 aaKnown RBP11.66□□□□□ -0.54
SOX9-AS1-210ENST00000533039 ZNF496Q96IT1 587 aaPredicted RBP11.66□□□□□ -0.54
SOX9-AS1-210ENST00000533039 FMNL2Q96PY5 1086 aa11.66□□□□□ -0.54
SOX9-AS1-210ENST00000533039 BCS1LQ9Y276 419 aa11.66□□□□□ -0.54
SOX9-AS1-210ENST00000533039 ZBTB1Q9Y2K1 713 aa11.66□□□□□ -0.54
SOX9-AS1-210ENST00000533039 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
SOX9-AS1-210ENST00000533039 SCN7AQ01118 1682 aa11.65□□□□□ -0.54
SOX9-AS1-210ENST00000533039 DLEC1Q9Y238 1755 aa11.65□□□□□ -0.54
SOX9-AS1-210ENST00000533039 BTBD11A6QL63 1104 aa11.65□□□□□ -0.54
SOX9-AS1-210ENST00000533039 GIGYF1O75420 1035 aaPredicted RBP11.65□□□□□ -0.54
SOX9-AS1-210ENST00000533039 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.54
SOX9-AS1-210ENST00000533039 NARFQ9UHQ1 456 aa11.65□□□□□ -0.54
SOX9-AS1-210ENST00000533039 ATP10DQ9P241 1426 aa11.64□□□□□ -0.55
SOX9-AS1-210ENST00000533039 A0A087WZG4 1122 aa11.64□□□□□ -0.55
SOX9-AS1-210ENST00000533039 DPEP1P16444 411 aa11.64□□□□□ -0.55
SOX9-AS1-210ENST00000533039 TM4SF1P30408 202 aa11.64□□□□□ -0.55
SOX9-AS1-210ENST00000533039 DDR1Q08345 913 aa11.64□□□□□ -0.55
SOX9-AS1-210ENST00000533039 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
SOX9-AS1-210ENST00000533039 POLRMTO00411 1230 aaKnown RBP11.63□□□□□ -0.55
SOX9-AS1-210ENST00000533039 HTATSF1O43719 755 aaKnown RBP11.63□□□□□ -0.55
SOX9-AS1-210ENST00000533039 C1QTNF8P60827 252 aa11.63□□□□□ -0.55
SOX9-AS1-210ENST00000533039 PNNQ9H307 717 aaKnown RBP11.63□□□□□ -0.55
SOX9-AS1-210ENST00000533039 PIM2Q9P1W9 311 aa11.63□□□□□ -0.55
SOX9-AS1-210ENST00000533039 ZNF330Q9Y3S2 320 aaPredicted RBP11.63□□□□□ -0.55
SOX9-AS1-210ENST00000533039 LAMB4A4D0S4 1761 aa11.63□□□□□ -0.55
SOX9-AS1-210ENST00000533039 EIF5P55010 431 aaKnown RBP11.62□□□□□ -0.55
SOX9-AS1-210ENST00000533039 NFIXQ14938 502 aa11.62□□□□□ -0.55
SOX9-AS1-210ENST00000533039 ARHGAP27Q6ZUM4 889 aa11.62□□□□□ -0.55
SOX9-AS1-210ENST00000533039 MCM10Q7L590 875 aa11.62□□□□□ -0.55
SOX9-AS1-210ENST00000533039 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
SOX9-AS1-210ENST00000533039 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
SOX9-AS1-210ENST00000533039 SBF1O95248 1867 aa11.61□□□□□ -0.55
SOX9-AS1-210ENST00000533039 KCNA3P22001 575 aa11.61□□□□□ -0.55
SOX9-AS1-210ENST00000533039 IL6STP40189 918 aaPredicted RBP11.61□□□□□ -0.55
SOX9-AS1-210ENST00000533039 ADCY9O60503 1353 aa11.61□□□□□ -0.55
SOX9-AS1-210ENST00000533039 CACNA1SQ13698 1873 aa11.61□□□□□ -0.55
SOX9-AS1-210ENST00000533039 CCDC88AQ3V6T2 1871 aa11.61□□□□□ -0.55
SOX9-AS1-210ENST00000533039 MAPK8IP3Q9UPT6 1336 aa11.6□□□□□ -0.55
SOX9-AS1-210ENST00000533039 ANKRD31Q8N7Z5 1873 aa11.6□□□□□ -0.55
SOX9-AS1-210ENST00000533039 KCNQ3O43525 872 aa11.6□□□□□ -0.55
SOX9-AS1-210ENST00000533039 A1BGP04217 495 aa11.6□□□□□ -0.55
SOX9-AS1-210ENST00000533039 SERPINB2P05120 415 aa11.6□□□□□ -0.55
SOX9-AS1-210ENST00000533039 SNRPA1P09661 255 aaKnown RBP11.6□□□□□ -0.55
SOX9-AS1-210ENST00000533039 DALRD3Q5D0E6 543 aaKnown RBP11.6□□□□□ -0.55
SOX9-AS1-210ENST00000533039 ZNF526Q8TF50 670 aaPredicted RBP11.6□□□□□ -0.55
SOX9-AS1-210ENST00000533039 CHRNA5P30532 468 aa11.59□□□□□ -0.55
SOX9-AS1-210ENST00000533039 DCTN1Q14203 1278 aa11.59□□□□□ -0.55
SOX9-AS1-210ENST00000533039 RALBP1Q15311 655 aa11.59□□□□□ -0.55
SOX9-AS1-210ENST00000533039 TAF7Q15545 349 aaPredicted RBP11.59□□□□□ -0.55
SOX9-AS1-210ENST00000533039 BICDL1Q6ZP65 573 aa11.59□□□□□ -0.55
SOX9-AS1-210ENST00000533039 BCL2L12Q9HB09 334 aa11.59□□□□□ -0.55
SOX9-AS1-210ENST00000533039 TBC1D2BQ9UPU7 963 aa11.59□□□□□ -0.55
SOX9-AS1-210ENST00000533039 SENP3-EIF4A1A0A087X0R7 540 aa11.58□□□□□ -0.56
SOX9-AS1-210ENST00000533039 NPHP1O15259 732 aa11.58□□□□□ -0.56
SOX9-AS1-210ENST00000533039 PNISRQ8TF01 805 aaKnown RBP11.58□□□□□ -0.56
SOX9-AS1-210ENST00000533039 USP16Q9Y5T5 823 aa11.58□□□□□ -0.56
SOX9-AS1-210ENST00000533039 CARMIL3Q8ND23 1372 aa11.57□□□□□ -0.56
SOX9-AS1-210ENST00000533039 H0YIN7 160 aa11.57□□□□□ -0.56
SOX9-AS1-210ENST00000533039 DDX10Q13206 875 aaKnown RBP11.57□□□□□ -0.56
SOX9-AS1-210ENST00000533039 NFE2L2Q16236 605 aa11.57□□□□□ -0.56
SOX9-AS1-210ENST00000533039 TBC1D9BQ66K14 1250 aa11.57□□□□□ -0.56
SOX9-AS1-210ENST00000533039 DZIP3Q86Y13 1208 aaKnown RBP11.57□□□□□ -0.56
SOX9-AS1-210ENST00000533039 PLEKHF1Q96S99 279 aa11.57□□□□□ -0.56
SOX9-AS1-210ENST00000533039 NUP98P52948 1817 aa11.56□□□□□ -0.56
SOX9-AS1-210ENST00000533039 COL11A2P13942 1736 aaPredicted RBP11.56□□□□□ -0.56
SOX9-AS1-210ENST00000533039 SETDB2Q96T68 719 aa11.56□□□□□ -0.56
SOX9-AS1-210ENST00000533039 PDZRN3Q9UPQ7 1066 aa11.56□□□□□ -0.56
SOX9-AS1-210ENST00000533039 ZNF652Q9Y2D9 606 aa11.56□□□□□ -0.56
SOX9-AS1-210ENST00000533039 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
SOX9-AS1-210ENST00000533039 PRAMEF22A3QJZ6 481 aa11.55□□□□□ -0.56
SOX9-AS1-210ENST00000533039 CAMTA2O94983 1202 aa11.55□□□□□ -0.56
SOX9-AS1-210ENST00000533039 PDE6BP35913 854 aa11.55□□□□□ -0.56
SOX9-AS1-210ENST00000533039 C2CD5Q86YS7 1000 aa11.55□□□□□ -0.56
SOX9-AS1-210ENST00000533039 TTLL6Q8N841 843 aa11.55□□□□□ -0.56
SOX9-AS1-210ENST00000533039 TNRC6CQ9HCJ0 1690 aaKnown RBP11.55□□□□□ -0.56
SOX9-AS1-210ENST00000533039 MYBBP1AQ9BQG0 1328 aaKnown RBP11.55□□□□□ -0.56
SOX9-AS1-210ENST00000533039 TIAM2Q8IVF5 1701 aa11.55□□□□□ -0.56
SOX9-AS1-210ENST00000533039 DICER1Q9UPY3 1922 aaKnown RBP11.54□□□□□ -0.56
SOX9-AS1-210ENST00000533039 PIP4K2AP48426 406 aaPredicted RBP11.54□□□□□ -0.56
SOX9-AS1-210ENST00000533039 ST5P78524 1137 aa11.54□□□□□ -0.56
SOX9-AS1-210ENST00000533039 C9orf131Q5VYM1 1079 aa11.54□□□□□ -0.56
SOX9-AS1-210ENST00000533039 CLEC4GQ6UXB4 293 aa11.54□□□□□ -0.56
SOX9-AS1-210ENST00000533039 CNBD1Q8NA66 436 aa11.54□□□□□ -0.56
SOX9-AS1-210ENST00000533039 BRIP1Q9BX63 1249 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms