RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 ATG3Q9NT62 314 aa10.53□□□□□ -0.72
TRIM49-202ENST00000532501 ERVV-2B6SEH9 535 aa10.52□□□□□ -0.73
TRIM49-202ENST00000532501 HSP90AB1P08238 724 aaKnown RBP10.52□□□□□ -0.73
TRIM49-202ENST00000532501 PLCG2P16885 1265 aa10.52□□□□□ -0.73
TRIM49-202ENST00000532501 CABP4P57796 275 aa10.52□□□□□ -0.73
TRIM49-202ENST00000532501 KRT24Q2M2I5 525 aa10.52□□□□□ -0.73
TRIM49-202ENST00000532501 WWC1Q8IX03 1113 aa10.52□□□□□ -0.73
TRIM49-202ENST00000532501 BTAF1O14981 1849 aa10.52□□□□□ -0.73
TRIM49-202ENST00000532501 KCPQ6ZWJ8 1503 aa10.52□□□□□ -0.73
TRIM49-202ENST00000532501 SIPA1L3O60292 1781 aaPredicted RBP10.51□□□□□ -0.73
TRIM49-202ENST00000532501 ITGB4P16144 1822 aa10.51□□□□□ -0.73
TRIM49-202ENST00000532501 EN1Q05925 392 aaPredicted RBP10.51□□□□□ -0.73
TRIM49-202ENST00000532501 PNNQ9H307 717 aaKnown RBP10.51□□□□□ -0.73
TRIM49-202ENST00000532501 LRRC4BQ9NT99 713 aa10.51□□□□□ -0.73
TRIM49-202ENST00000532501 TMOD3Q9NYL9 352 aa10.51□□□□□ -0.73
TRIM49-202ENST00000532501 PALLDQ8WX93 1383 aa10.51□□□□□ -0.73
TRIM49-202ENST00000532501 PAPPAQ13219 1627 aa10.51□□□□□ -0.73
TRIM49-202ENST00000532501 PRAMEF22A3QJZ6 481 aa10.5□□□□□ -0.73
TRIM49-202ENST00000532501 HTATSF1O43719 755 aaKnown RBP10.5□□□□□ -0.73
TRIM49-202ENST00000532501 APBA3O96018 575 aa10.5□□□□□ -0.73
TRIM49-202ENST00000532501 NEFMP07197 916 aa10.5□□□□□ -0.73
TRIM49-202ENST00000532501 ZNF853P0CG23 659 aa10.5□□□□□ -0.73
TRIM49-202ENST00000532501 EZH2Q15910 746 aaKnown RBP10.5□□□□□ -0.73
TRIM49-202ENST00000532501 RTF1Q92541 710 aaKnown RBP10.5□□□□□ -0.73
TRIM49-202ENST00000532501 HNRNPUQ00839 825 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRIM49-202ENST00000532501 TEFQ10587 303 aa10.5□□□□□ -0.73
TRIM49-202ENST00000532501 ITPK1Q13572 414 aa10.5□□□□□ -0.73
TRIM49-202ENST00000532501 CCDC27Q2M243 656 aa10.5□□□□□ -0.73
TRIM49-202ENST00000532501 SRCAPQ6ZRS2 3230 aa10.5□□□□□ -0.73
TRIM49-202ENST00000532501 SMIM5Q71RC9 77 aa10.5□□□□□ -0.73
TRIM49-202ENST00000532501 CDCA7LQ96GN5 454 aa10.5□□□□□ -0.73
TRIM49-202ENST00000532501 ZNF496Q96IT1 587 aaPredicted RBP10.5□□□□□ -0.73
TRIM49-202ENST00000532501 CAMKK2Q96RR4 588 aa10.5□□□□□ -0.73
TRIM49-202ENST00000532501 PTCD1O75127 700 aaKnown RBP10.49□□□□□ -0.73
TRIM49-202ENST00000532501 EMP3P54852 163 aa10.49□□□□□ -0.73
TRIM49-202ENST00000532501 AMIGO3Q86WK7 504 aa10.49□□□□□ -0.73
TRIM49-202ENST00000532501 TSR2Q969E8 191 aaKnown RBP10.49□□□□□ -0.73
TRIM49-202ENST00000532501 ANO8Q9HCE9 1232 aaPredicted RBP10.49□□□□□ -0.73
TRIM49-202ENST00000532501 KAT6BQ8WYB5 2073 aa10.48□□□□□ -0.73
TRIM49-202ENST00000532501 VIRMAQ69YN4 1812 aaKnown RBP10.48□□□□□ -0.73
TRIM49-202ENST00000532501 CHL1O00533 1208 aa10.48□□□□□ -0.73
TRIM49-202ENST00000532501 TAF7Q15545 349 aaPredicted RBP10.48□□□□□ -0.73
TRIM49-202ENST00000532501 MBIPQ9NS73 344 aa10.48□□□□□ -0.73
TRIM49-202ENST00000532501 LAS1LQ9Y4W2 734 aaKnown RBP10.48□□□□□ -0.73
TRIM49-202ENST00000532501 LOC102724428A0A0B4J2F2 783 aa10.47□□□□□ -0.73
TRIM49-202ENST00000532501 BTBD11A6QL63 1104 aa10.47□□□□□ -0.73
TRIM49-202ENST00000532501 SIK1P57059 783 aa10.47□□□□□ -0.73
TRIM49-202ENST00000532501 LMOD3Q0VAK6 560 aa10.47□□□□□ -0.73
TRIM49-202ENST00000532501 TXNRD1Q16881 649 aa10.47□□□□□ -0.73
TRIM49-202ENST00000532501 ZNF790Q6PG37 636 aa10.47□□□□□ -0.73
TRIM49-202ENST00000532501 LINC00116Q8NCU8 138 aa10.47□□□□□ -0.73
TRIM49-202ENST00000532501 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
TRIM49-202ENST00000532501 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
TRIM49-202ENST00000532501 TSPYL4Q9UJ04 414 aa10.47□□□□□ -0.73
TRIM49-202ENST00000532501 KDM3BQ7LBC6 1761 aa10.46□□□□□ -0.73
TRIM49-202ENST00000532501 HEG1Q9ULI3 1381 aa10.46□□□□□ -0.73
TRIM49-202ENST00000532501 FANCIQ9NVI1 1328 aa10.46□□□□□ -0.73
TRIM49-202ENST00000532501 PLSCR1O15162 318 aa10.46□□□□□ -0.74
TRIM49-202ENST00000532501 EIF4A1P60842 406 aaKnown RBP10.46□□□□□ -0.74
TRIM49-202ENST00000532501 DNAJC10Q8IXB1 793 aa10.46□□□□□ -0.74
TRIM49-202ENST00000532501 YTHDC1Q96MU7 727 aaKnown RBP10.46□□□□□ -0.74
TRIM49-202ENST00000532501 UBR2Q8IWV8 1755 aa10.46□□□□□ -0.74
TRIM49-202ENST00000532501 ZNF827Q17R98 1081 aa10.45□□□□□ -0.74
TRIM49-202ENST00000532501 TSPYL6Q8N831 410 aa10.45□□□□□ -0.74
TRIM49-202ENST00000532501 CFAP44Q96MT7 982 aa10.45□□□□□ -0.74
TRIM49-202ENST00000532501 IFT57Q9NWB7 429 aa10.45□□□□□ -0.74
TRIM49-202ENST00000532501 LY75O60449 1722 aa10.45□□□□□ -0.74
TRIM49-202ENST00000532501 TJP1Q07157 1748 aa10.45□□□□□ -0.74
TRIM49-202ENST00000532501 BAG6P46379 1132 aa10.44□□□□□ -0.74
TRIM49-202ENST00000532501 PIP4K2AP48426 406 aaPredicted RBP10.44□□□□□ -0.74
TRIM49-202ENST00000532501 C8orf58Q8NAV2 365 aa10.44□□□□□ -0.74
TRIM49-202ENST00000532501 CCNL1Q9UK58 526 aaPredicted RBP10.44□□□□□ -0.74
TRIM49-202ENST00000532501 C5P01031 1676 aa10.44□□□□□ -0.74
TRIM49-202ENST00000532501 RREB1Q92766 1687 aa10.44□□□□□ -0.74
TRIM49-202ENST00000532501 NUP188Q5SRE5 1749 aa10.44□□□□□ -0.74
TRIM49-202ENST00000532501 IL16Q14005 1332 aa10.44□□□□□ -0.74
TRIM49-202ENST00000532501 WDR63Q8IWG1 891 aa10.43□□□□□ -0.74
TRIM49-202ENST00000532501 SMARCC1Q92922 1105 aaPredicted RBP10.43□□□□□ -0.74
TRIM49-202ENST00000532501 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.43□□□□□ -0.74
TRIM49-202ENST00000532501 USP16Q9Y5T5 823 aa10.43□□□□□ -0.74
TRIM49-202ENST00000532501 ZBED9Q6R2W3 1325 aa10.43□□□□□ -0.74
TRIM49-202ENST00000532501 ELL2O00472 640 aaPredicted RBP10.42□□□□□ -0.74
TRIM49-202ENST00000532501 GIGYF1O75420 1035 aaPredicted RBP10.42□□□□□ -0.74
TRIM49-202ENST00000532501 SLFN5Q08AF3 891 aa10.42□□□□□ -0.74
TRIM49-202ENST00000532501 DUSP27Q5VZP5 1158 aa10.42□□□□□ -0.74
TRIM49-202ENST00000532501 TRMT2AQ8IZ69 625 aaKnown RBP10.42□□□□□ -0.74
TRIM49-202ENST00000532501 PDGFDQ9GZP0 370 aaPredicted RBP10.42□□□□□ -0.74
TRIM49-202ENST00000532501 PCDHB13Q9Y5F0 798 aa10.42□□□□□ -0.74
TRIM49-202ENST00000532501 ANXA1P04083 346 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 CYP19A1P11511 503 aaPredicted RBP10.41□□□□□ -0.74
TRIM49-202ENST00000532501 ATP6V1AP38606 617 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 GNAI1P63096 354 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 EXOSC9Q06265 439 aaKnown RBP10.41□□□□□ -0.74
TRIM49-202ENST00000532501 GOLGA2Q08379 1002 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 SF3B2Q13435 895 aaKnown RBP10.41□□□□□ -0.74
TRIM49-202ENST00000532501 INTS5Q6P9B9 1019 aaKnown RBP10.41□□□□□ -0.74
TRIM49-202ENST00000532501 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 TTC5Q8N0Z6 440 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 NECTIN2Q92692 538 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 FMNL2Q96PY5 1086 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms