RNA–Protein interactions for RNA: ENST00000532474.5

RCN1-208, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-208ENST00000532474 EXOC5O00471 708 aa8.5□□□□□ -1.05
RCN1-208ENST00000532474 MAP3K7O43318 606 aa8.5□□□□□ -1.05
RCN1-208ENST00000532474 NBPF14Q5TI25 921 aa8.49□□□□□ -1.05
RCN1-208ENST00000532474 NYAP1Q6ZVC0 841 aa8.49□□□□□ -1.05
RCN1-208ENST00000532474 ANKRD24Q8TF21 1146 aa8.49□□□□□ -1.05
RCN1-208ENST00000532474 IP6K1Q92551 441 aa8.49□□□□□ -1.05
RCN1-208ENST00000532474 SOWAHBA6NEL2 793 aa8.48□□□□□ -1.05
RCN1-208ENST00000532474 FYB1O15117 783 aa8.48□□□□□ -1.05
RCN1-208ENST00000532474 IL2RBP14784 551 aa8.48□□□□□ -1.05
RCN1-208ENST00000532474 AMPHP49418 695 aa8.48□□□□□ -1.05
RCN1-208ENST00000532474 EZH2Q15910 746 aaKnown RBP8.48□□□□□ -1.05
RCN1-208ENST00000532474 PACS2Q86VP3 889 aa8.48□□□□□ -1.05
RCN1-208ENST00000532474 MARCH10Q8NA82 808 aaPredicted RBP8.48□□□□□ -1.05
RCN1-208ENST00000532474 ZFRQ96KR1 1074 aaKnown RBP8.48□□□□□ -1.05
RCN1-208ENST00000532474 RTL1A6NKG5 1358 aa8.48□□□□□ -1.05
RCN1-208ENST00000532474 EP400Q96L91 3159 aa8.47□□□□□ -1.05
RCN1-208ENST00000532474 PLSCR1O15162 318 aa8.47□□□□□ -1.05
RCN1-208ENST00000532474 RGS20O76081 388 aa8.47□□□□□ -1.05
RCN1-208ENST00000532474 EIF4G2P78344 907 aaKnown RBP eCLIP8.47□□□□□ -1.05
RCN1-208ENST00000532474 MAP3K19Q56UN5 1328 aa8.47□□□□□ -1.05
RCN1-208ENST00000532474 MON2Q7Z3U7 1717 aa8.46□□□□□ -1.05
RCN1-208ENST00000532474 AKAP12Q02952 1782 aa8.46□□□□□ -1.05
RCN1-208ENST00000532474 BRWD3Q6RI45 1802 aa8.46□□□□□ -1.06
RCN1-208ENST00000532474 HOXC9P31274 260 aa8.46□□□□□ -1.06
RCN1-208ENST00000532474 R3HDM1Q15032 1099 aaKnown RBP8.46□□□□□ -1.06
RCN1-208ENST00000532474 CGNL1Q0VF96 1302 aa8.46□□□□□ -1.06
RCN1-208ENST00000532474 KIF24Q5T7B8 1368 aa8.46□□□□□ -1.06
RCN1-208ENST00000532474 TNS2Q63HR2 1409 aa8.46□□□□□ -1.06
RCN1-208ENST00000532474 BCAMP50895 628 aa8.45□□□□□ -1.06
RCN1-208ENST00000532474 LTV1Q96GA3 475 aaPredicted RBP8.45□□□□□ -1.06
RCN1-208ENST00000532474 GGNBP2Q9H3C7 697 aa8.45□□□□□ -1.06
RCN1-208ENST00000532474 SEPT9Q9UHD8 586 aaPredicted RBP8.45□□□□□ -1.06
RCN1-208ENST00000532474 COL18A1P39060 1754 aa8.45□□□□□ -1.06
RCN1-208ENST00000532474 SMG6Q86US8 1419 aaKnown RBP8.45□□□□□ -1.06
RCN1-208ENST00000532474 USP54Q70EL1 1684 aa8.44□□□□□ -1.06
RCN1-208ENST00000532474 RGPD1P0DJD0 1748 aa8.44□□□□□ -1.06
RCN1-208ENST00000532474 PARP4Q9UKK3 1724 aaKnown RBP8.44□□□□□ -1.06
RCN1-208ENST00000532474 GRXCR2A6NFK2 248 aa8.44□□□□□ -1.06
RCN1-208ENST00000532474 TSR1Q2NL82 804 aaKnown RBP8.44□□□□□ -1.06
RCN1-208ENST00000532474 CARD14Q9BXL6 1004 aa8.44□□□□□ -1.06
RCN1-208ENST00000532474 RRS1Q15050 365 aaKnown RBP8.43□□□□□ -1.06
RCN1-208ENST00000532474 LRCH3Q96II8 777 aa8.43□□□□□ -1.06
RCN1-208ENST00000532474 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.43□□□□□ -1.06
RCN1-208ENST00000532474 FLT4P35916 1363 aa8.43□□□□□ -1.06
RCN1-208ENST00000532474 NSD3Q9BZ95 1437 aa8.43□□□□□ -1.06
RCN1-208ENST00000532474 LRRC37A3O60309 1634 aa8.43□□□□□ -1.06
RCN1-208ENST00000532474 HSPA5P11021 654 aaKnown RBP8.42□□□□□ -1.06
RCN1-208ENST00000532474 FBLN1P23142 703 aa8.42□□□□□ -1.06
RCN1-208ENST00000532474 PRSS12P56730 875 aa8.42□□□□□ -1.06
RCN1-208ENST00000532474 RAPGEF4Q8WZA2 1011 aa8.42□□□□□ -1.06
RCN1-208ENST00000532474 CDCA7LQ96GN5 454 aa8.42□□□□□ -1.06
RCN1-208ENST00000532474 TSKSQ9UJT2 592 aa8.42□□□□□ -1.06
RCN1-208ENST00000532474 INSRP06213 1382 aa8.42□□□□□ -1.06
RCN1-208ENST00000532474 ITGBL1O95965 494 aaPredicted RBP8.41□□□□□ -1.06
RCN1-208ENST00000532474 TXNRD1Q16881 649 aa8.41□□□□□ -1.06
RCN1-208ENST00000532474 HSP90AB2PQ58FF8 381 aa8.41□□□□□ -1.06
RCN1-208ENST00000532474 NBPF6Q5VWK0 638 aa8.41□□□□□ -1.06
RCN1-208ENST00000532474 PTF1AQ7RTS3 328 aa8.41□□□□□ -1.06
RCN1-208ENST00000532474 ZCRB1Q8TBF4 217 aaKnown RBP8.41□□□□□ -1.06
RCN1-208ENST00000532474 DDX54Q8TDD1 881 aaKnown RBP8.41□□□□□ -1.06
RCN1-208ENST00000532474 NBPF4Q96M43 638 aa8.41□□□□□ -1.06
RCN1-208ENST00000532474 POLR3GLQ9BT43 218 aa8.41□□□□□ -1.06
RCN1-208ENST00000532474 TSR3Q9UJK0 312 aaKnown RBP8.41□□□□□ -1.06
RCN1-208ENST00000532474 KCNQ2O43526 872 aa8.4□□□□□ -1.06
RCN1-208ENST00000532474 HMGB2P26583 209 aaKnown RBP8.4□□□□□ -1.06
RCN1-208ENST00000532474 SPON1Q9HCB6 807 aa8.4□□□□□ -1.06
RCN1-208ENST00000532474 WBP1LQ9NX94 342 aa8.4□□□□□ -1.06
RCN1-208ENST00000532474 STK32BQ9NY57 414 aa8.4□□□□□ -1.06
RCN1-208ENST00000532474 PEAK1Q9H792 1746 aa8.4□□□□□ -1.07
RCN1-208ENST00000532474 TNS1Q9HBL0 1735 aaKnown RBP8.4□□□□□ -1.07
RCN1-208ENST00000532474 NSD2O96028 1365 aa8.39□□□□□ -1.07
RCN1-208ENST00000532474 WASHC2AQ641Q2 1341 aa8.39□□□□□ -1.07
RCN1-208ENST00000532474 PPM1GO15355 546 aaPredicted RBP8.39□□□□□ -1.07
RCN1-208ENST00000532474 TATP17735 454 aaPredicted RBP8.39□□□□□ -1.07
RCN1-208ENST00000532474 OSBPP22059 807 aa8.39□□□□□ -1.07
RCN1-208ENST00000532474 SLC27A3Q5K4L6 730 aa8.39□□□□□ -1.07
RCN1-208ENST00000532474 ACSBG1Q96GR2 724 aa8.39□□□□□ -1.07
RCN1-208ENST00000532474 PANK3Q9H999 370 aa8.39□□□□□ -1.07
RCN1-208ENST00000532474 EMILIN1Q9Y6C2 1016 aa8.39□□□□□ -1.07
RCN1-208ENST00000532474 SRCAPQ6ZRS2 3230 aa8.39□□□□□ -1.07
RCN1-208ENST00000532474 PCDH11XQ9BZA7 1347 aa8.38□□□□□ -1.07
RCN1-208ENST00000532474 PCDH11YQ9BZA8 1340 aa8.38□□□□□ -1.07
RCN1-208ENST00000532474 NBPF26B4DH59 902 aa8.38□□□□□ -1.07
RCN1-208ENST00000532474 SLC15A2Q16348 729 aa8.38□□□□□ -1.07
RCN1-208ENST00000532474 POLKQ9UBT6 870 aa8.38□□□□□ -1.07
RCN1-208ENST00000532474 HPS5Q9UPZ3 1129 aa8.38□□□□□ -1.07
RCN1-208ENST00000532474 LRP5O75197 1615 aa8.38□□□□□ -1.07
RCN1-208ENST00000532474 PRIM1P49642 420 aaKnown RBP8.37□□□□□ -1.07
RCN1-208ENST00000532474 PPP4CP60510 307 aa8.37□□□□□ -1.07
RCN1-208ENST00000532474 KCNC4Q03721 635 aa8.37□□□□□ -1.07
RCN1-208ENST00000532474 SYTL4Q96C24 671 aaPredicted RBP8.37□□□□□ -1.07
RCN1-208ENST00000532474 RBM27Q9P2N5 1060 aaKnown RBP8.37□□□□□ -1.07
RCN1-208ENST00000532474 KNSTRNQ9Y448 316 aa8.37□□□□□ -1.07
RCN1-208ENST00000532474 PLEKHG2Q9H7P9 1386 aa8.36□□□□□ -1.07
RCN1-208ENST00000532474 MEGF6O75095 1541 aa8.36□□□□□ -1.07
RCN1-208ENST00000532474 USHBP1Q8N6Y0 703 aa8.36□□□□□ -1.07
RCN1-208ENST00000532474 ARHGEF1Q92888 912 aaKnown RBP8.36□□□□□ -1.07
RCN1-208ENST00000532474 TATDN2Q93075 761 aa8.36□□□□□ -1.07
RCN1-208ENST00000532474 PPP1R1BQ9UD71 204 aaPredicted RBP8.36□□□□□ -1.07
RCN1-208ENST00000532474 SPG7Q9UQ90 795 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms