RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 ASXL2Q76L83 1435 aa12.8□□□□□ -0.36
CHEK1-213ENST00000532449 C1orf141Q5JVX7 400 aa12.8□□□□□ -0.36
CHEK1-213ENST00000532449 RNF20Q5VTR2 975 aa12.8□□□□□ -0.36
CHEK1-213ENST00000532449 NRBP1Q9UHY1 535 aa12.8□□□□□ -0.36
CHEK1-213ENST00000532449 PTPRTO14522 1441 aa12.8□□□□□ -0.36
CHEK1-213ENST00000532449 POLR3DP05423 398 aaPredicted RBP12.79□□□□□ -0.36
CHEK1-213ENST00000532449 GTF2F1P35269 517 aaKnown RBP eCLIP12.79□□□□□ -0.367e-6■■■■□ 21.3
CHEK1-213ENST00000532449 EIF4A2Q14240 407 aaKnown RBP12.79□□□□□ -0.36
CHEK1-213ENST00000532449 PPP1R9BQ96SB3 815 aa12.79□□□□□ -0.36
CHEK1-213ENST00000532449 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
CHEK1-213ENST00000532449 HAND2P61296 217 aa12.79□□□□□ -0.36
CHEK1-213ENST00000532449 ABCC10Q5T3U5 1492 aa12.79□□□□□ -0.36
CHEK1-213ENST00000532449 HSP90AB3PQ58FF7 597 aa12.78□□□□□ -0.36
CHEK1-213ENST00000532449 RHPN1Q8TCX5 695 aa12.78□□□□□ -0.36
CHEK1-213ENST00000532449 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
CHEK1-213ENST00000532449 STK38Q15208 465 aa12.78□□□□□ -0.36
CHEK1-213ENST00000532449 MTHFSDQ2M296 383 aaKnown RBP12.78□□□□□ -0.36
CHEK1-213ENST00000532449 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
CHEK1-213ENST00000532449 ZDHHC9Q9Y397 364 aa12.78□□□□□ -0.36
CHEK1-213ENST00000532449 ANKRD36BQ8N2N9 1353 aa12.78□□□□□ -0.36
CHEK1-213ENST00000532449 UBE2HP62256 183 aa12.78□□□□□ -0.36
CHEK1-213ENST00000532449 PTPN14Q15678 1187 aa12.78□□□□□ -0.36
CHEK1-213ENST00000532449 CWF19L2Q2TBE0 894 aaKnown RBP12.78□□□□□ -0.36
CHEK1-213ENST00000532449 GTF3C6Q969F1 213 aa12.78□□□□□ -0.36
CHEK1-213ENST00000532449 USP16Q9Y5T5 823 aa12.78□□□□□ -0.36
CHEK1-213ENST00000532449 F13A1P00488 732 aa12.77□□□□□ -0.36
CHEK1-213ENST00000532449 IBSPP21815 317 aaPredicted RBP12.77□□□□□ -0.36
CHEK1-213ENST00000532449 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.36
CHEK1-213ENST00000532449 CCDC144CPQ8IYA2 1237 aa12.77□□□□□ -0.36
CHEK1-213ENST00000532449 PIBF1Q8WXW3 757 aa12.77□□□□□ -0.36
CHEK1-213ENST00000532449 CCDC94Q9BW85 323 aaPredicted RBP12.77□□□□□ -0.36
CHEK1-213ENST00000532449 FKBP4Q02790 459 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHEK1-213ENST00000532449 PLEKHF1Q96S99 279 aa12.77□□□□□ -0.37
CHEK1-213ENST00000532449 TPM4P67936 248 aa12.77□□□□□ -0.37
CHEK1-213ENST00000532449 NEXNQ0ZGT2 675 aa12.77□□□□□ -0.37
CHEK1-213ENST00000532449 DDX46Q7L014 1031 aaKnown RBP12.77□□□□□ -0.37
CHEK1-213ENST00000532449 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
CHEK1-213ENST00000532449 RASSF8Q8NHQ8 419 aa12.77□□□□□ -0.37
CHEK1-213ENST00000532449 ATP5J2-PTCD1G3V325 749 aa12.76□□□□□ -0.37
CHEK1-213ENST00000532449 PTCD1O75127 700 aaKnown RBP12.76□□□□□ -0.37
CHEK1-213ENST00000532449 URI1O94763 535 aaPredicted RBP12.76□□□□□ -0.37
CHEK1-213ENST00000532449 SERPINC1P01008 464 aa12.76□□□□□ -0.37
CHEK1-213ENST00000532449 RRP12Q5JTH9 1297 aaKnown RBP12.76□□□□□ -0.37
CHEK1-213ENST00000532449 CHPF2Q9P2E5 772 aa12.76□□□□□ -0.37
CHEK1-213ENST00000532449 ADGRL2O95490 1459 aa12.76□□□□□ -0.37
CHEK1-213ENST00000532449 ZBTB22O15209 634 aa12.76□□□□□ -0.37
CHEK1-213ENST00000532449 LIG1P18858 919 aa12.76□□□□□ -0.37
CHEK1-213ENST00000532449 CEBPAP49715 358 aaPredicted RBP12.76□□□□□ -0.37
CHEK1-213ENST00000532449 TYRO3Q06418 890 aa12.76□□□□□ -0.37
CHEK1-213ENST00000532449 SYNE3Q6ZMZ3 975 aa12.76□□□□□ -0.37
CHEK1-213ENST00000532449 FAM227BQ96M60 508 aa12.76□□□□□ -0.37
CHEK1-213ENST00000532449 NLRP2Q9NX02 1062 aa12.76□□□□□ -0.37
CHEK1-213ENST00000532449 OTUD7BQ6GQQ9 843 aa12.75□□□□□ -0.37
CHEK1-213ENST00000532449 CCDC129Q6ZRS4 1044 aa12.75□□□□□ -0.37
CHEK1-213ENST00000532449 BRF1Q92994 677 aa12.75□□□□□ -0.37
CHEK1-213ENST00000532449 NBPF7P0C2Y1 421 aaPredicted RBP12.75□□□□□ -0.37
CHEK1-213ENST00000532449 PPARDQ03181 441 aa12.75□□□□□ -0.37
CHEK1-213ENST00000532449 KIF1BPQ96EK5 621 aa12.75□□□□□ -0.37
CHEK1-213ENST00000532449 CPLX3Q8WVH0 158 aa12.75□□□□□ -0.37
CHEK1-213ENST00000532449 RBM8AQ9Y5S9 174 aaKnown RBP12.75□□□□□ -0.37
CHEK1-213ENST00000532449 NFXL1Q6ZNB6 911 aa12.74□□□□□ -0.37
CHEK1-213ENST00000532449 LARGE1O95461 756 aa12.74□□□□□ -0.37
CHEK1-213ENST00000532449 PSME1Q06323 249 aa12.74□□□□□ -0.37
CHEK1-213ENST00000532449 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
CHEK1-213ENST00000532449 TMC6Q7Z403 805 aa12.74□□□□□ -0.37
CHEK1-213ENST00000532449 ERVK-7P63135 1459 aa12.74□□□□□ -0.37
CHEK1-213ENST00000532449 JAK2O60674 1132 aa12.74□□□□□ -0.37
CHEK1-213ENST00000532449 TRHP20396 242 aaPredicted RBP12.74□□□□□ -0.37
CHEK1-213ENST00000532449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.74□□□□□ -0.37
CHEK1-213ENST00000532449 WASLO00401 505 aaPredicted RBP12.73□□□□□ -0.37
CHEK1-213ENST00000532449 SKILP12757 684 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 TEX35Q5T0J7 233 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 IL16Q14005 1332 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 ZCCHC11Q5TAX3 1644 aaKnown RBP12.73□□□□□ -0.37
CHEK1-213ENST00000532449 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 LETM1O95202 739 aaPredicted RBP12.73□□□□□ -0.37
CHEK1-213ENST00000532449 BRD1O95696 1058 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 PDCP20941 246 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 PSMA5P28066 241 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 ZC3H6P61129 1189 aaKnown RBP12.73□□□□□ -0.37
CHEK1-213ENST00000532449 ADCK5Q3MIX3 580 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 LARP1Q6PKG0 1096 aaKnown RBP12.73□□□□□ -0.37
CHEK1-213ENST00000532449 TTC37Q6PGP7 1564 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 ARID5BQ14865 1188 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 CFAP100Q494V2 611 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 FSIP1Q8NA03 581 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 ARHGAP45Q92619 1136 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 SYNMO15061 1565 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 ADGRL1O94910 1474 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 CEP135Q66GS9 1140 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 KLHL10Q6JEL2 608 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 SNX14Q9Y5W7 946 aa12.73□□□□□ -0.37
CHEK1-213ENST00000532449 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
CHEK1-213ENST00000532449 LMOD1P29536 600 aaPredicted RBP12.72□□□□□ -0.37
CHEK1-213ENST00000532449 HDGFP51858 240 aaKnown RBP12.72□□□□□ -0.37
CHEK1-213ENST00000532449 ATP2B3Q16720 1220 aa12.72□□□□□ -0.37
CHEK1-213ENST00000532449 MYRIPQ8NFW9 859 aa12.72□□□□□ -0.37
CHEK1-213ENST00000532449 FTOQ9C0B1 505 aaKnown RBP eCLIP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 271 ms