RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 DCTN1Q14203 1278 aa13.96□□□□□ -0.17
CSRP1-215ENST00000532313 AACSQ86V21 672 aa13.96□□□□□ -0.17
CSRP1-215ENST00000532313 PDZRN3Q9UPQ7 1066 aa13.96□□□□□ -0.17
CSRP1-215ENST00000532313 R3HCC1Q9Y3T6 440 aaKnown RBP13.96□□□□□ -0.17
CSRP1-215ENST00000532313 ADGRL3Q9HAR2 1447 aa13.96□□□□□ -0.17
CSRP1-215ENST00000532313 ALDH1L1O75891 902 aa13.96□□□□□ -0.17
CSRP1-215ENST00000532313 FKBP4Q02790 459 aaKnown RBP eCLIP13.96□□□□□ -0.17
CSRP1-215ENST00000532313 FLIIQ13045 1269 aa13.96□□□□□ -0.17
CSRP1-215ENST00000532313 RTL1A6NKG5 1358 aa13.96□□□□□ -0.17
CSRP1-215ENST00000532313 TET3O43151 1660 aa13.96□□□□□ -0.18
CSRP1-215ENST00000532313 SYNMO15061 1565 aa13.96□□□□□ -0.18
CSRP1-215ENST00000532313 PTPRTO14522 1441 aa13.96□□□□□ -0.18
CSRP1-215ENST00000532313 AIDAQ96BJ3 306 aa13.96□□□□□ -0.18
CSRP1-215ENST00000532313 POLR3DP05423 398 aaPredicted RBP13.95□□□□□ -0.18
CSRP1-215ENST00000532313 TDO2P48775 406 aa13.95□□□□□ -0.18
CSRP1-215ENST00000532313 ALDH1B1P30837 517 aa13.95□□□□□ -0.18
CSRP1-215ENST00000532313 KIF24Q5T7B8 1368 aa13.95□□□□□ -0.18
CSRP1-215ENST00000532313 MPHOSPH6Q99547 160 aaKnown RBP13.95□□□□□ -0.18
CSRP1-215ENST00000532313 CDC45O75419 566 aa13.95□□□□□ -0.18
CSRP1-215ENST00000532313 HOXB7P09629 217 aa13.95□□□□□ -0.18
CSRP1-215ENST00000532313 SEPT12Q8IYM1 358 aa13.95□□□□□ -0.18
CSRP1-215ENST00000532313 CABP5Q9NP86 173 aa13.95□□□□□ -0.18
CSRP1-215ENST00000532313 MAP3K2Q9Y2U5 619 aa13.95□□□□□ -0.18
CSRP1-215ENST00000532313 CCDC85AQ96PX6 553 aaPredicted RBP13.94□□□□□ -0.18
CSRP1-215ENST00000532313 TNNI2P48788 182 aa13.94□□□□□ -0.18
CSRP1-215ENST00000532313 DDX17Q92841 729 aaKnown RBP13.94□□□□□ -0.18
CSRP1-215ENST00000532313 HOOK1Q9UJC3 728 aaKnown RBP13.94□□□□□ -0.18
CSRP1-215ENST00000532313 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
CSRP1-215ENST00000532313 SPATA31A3Q5VYP0 1347 aa13.93□□□□□ -0.18
CSRP1-215ENST00000532313 IDH1O75874 414 aaKnown RBP13.93□□□□□ -0.18
CSRP1-215ENST00000532313 PANK1Q8TE04 598 aa13.93□□□□□ -0.18
CSRP1-215ENST00000532313 WDR17Q8IZU2 1322 aa13.93□□□□□ -0.18
CSRP1-215ENST00000532313 TPM2P07951 284 aa13.93□□□□□ -0.18
CSRP1-215ENST00000532313 THUMPD2Q9BTF0 503 aaKnown RBP13.93□□□□□ -0.18
CSRP1-215ENST00000532313 TRAF1Q13077 416 aa13.92□□□□□ -0.18
CSRP1-215ENST00000532313 XAGE3Q8WTP9 111 aa13.92□□□□□ -0.18
CSRP1-215ENST00000532313 PLEKHH1Q9ULM0 1364 aa13.92□□□□□ -0.18
CSRP1-215ENST00000532313 KIAA0232Q92628 1395 aa13.92□□□□□ -0.18
CSRP1-215ENST00000532313 NPC1L1Q9UHC9 1359 aa13.92□□□□□ -0.18
CSRP1-215ENST00000532313 LNPKQ9C0E8 428 aa13.92□□□□□ -0.18
CSRP1-215ENST00000532313 ADGRB3O60242 1522 aa13.92□□□□□ -0.18
CSRP1-215ENST00000532313 MTHFSDQ2M296 383 aaKnown RBP13.91□□□□□ -0.18
CSRP1-215ENST00000532313 GCC2Q8IWJ2 1684 aa13.91□□□□□ -0.18
CSRP1-215ENST00000532313 KSR2Q6VAB6 950 aa13.91□□□□□ -0.18
CSRP1-215ENST00000532313 UBAC1Q9BSL1 405 aa13.91□□□□□ -0.18
CSRP1-215ENST00000532313 FAM161AQ3B820 660 aa13.91□□□□□ -0.18
CSRP1-215ENST00000532313 RRP12Q5JTH9 1297 aaKnown RBP13.91□□□□□ -0.18
CSRP1-215ENST00000532313 COPS6Q7L5N1 327 aa13.91□□□□□ -0.18
CSRP1-215ENST00000532313 TRIM44Q96DX7 344 aaPredicted RBP13.91□□□□□ -0.18
CSRP1-215ENST00000532313 MPHOSPH10O00566 681 aaKnown RBP13.91□□□□□ -0.18
CSRP1-215ENST00000532313 SLC39A6Q13433 755 aa13.91□□□□□ -0.18
CSRP1-215ENST00000532313 FBXO41Q8TF61 875 aa13.91□□□□□ -0.18
CSRP1-215ENST00000532313 SLC52A2Q9HAB3 445 aa13.91□□□□□ -0.18
CSRP1-215ENST00000532313 PLCG2P16885 1265 aa13.9□□□□□ -0.18
CSRP1-215ENST00000532313 SLFN5Q08AF3 891 aa13.9□□□□□ -0.18
CSRP1-215ENST00000532313 TESK2Q96S53 571 aa13.9□□□□□ -0.18
CSRP1-215ENST00000532313 ROBO2Q9HCK4 1378 aa13.9□□□□□ -0.18
CSRP1-215ENST00000532313 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
CSRP1-215ENST00000532313 TRIM22Q8IYM9 498 aa13.9□□□□□ -0.18
CSRP1-215ENST00000532313 KIF1BO60333 1816 aa13.9□□□□□ -0.18
CSRP1-215ENST00000532313 UBE3BQ7Z3V4 1068 aa13.9□□□□□ -0.18
CSRP1-215ENST00000532313 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
CSRP1-215ENST00000532313 CNKSR1Q969H4 720 aa13.9□□□□□ -0.18
CSRP1-215ENST00000532313 RNF41Q9H4P4 317 aaPredicted RBP13.9□□□□□ -0.18
CSRP1-215ENST00000532313 NCOA3Q9Y6Q9 1424 aa13.9□□□□□ -0.18
CSRP1-215ENST00000532313 ATP7BP35670 1465 aa13.9□□□□□ -0.18
CSRP1-215ENST00000532313 GLRX3O76003 335 aaKnown RBP13.89□□□□□ -0.19
CSRP1-215ENST00000532313 SLC4A3P48751 1232 aa13.89□□□□□ -0.19
CSRP1-215ENST00000532313 MKNK2Q9HBH9 465 aa13.89□□□□□ -0.19
CSRP1-215ENST00000532313 INSRP06213 1382 aa13.89□□□□□ -0.19
CSRP1-215ENST00000532313 CFAP65Q6ZU64 1925 aaKnown RBP13.89□□□□□ -0.19
CSRP1-215ENST00000532313 KRT32Q14532 448 aa13.89□□□□□ -0.19
CSRP1-215ENST00000532313 ZNF790Q6PG37 636 aa13.89□□□□□ -0.19
CSRP1-215ENST00000532313 MCTP1Q6DN14 999 aa13.89□□□□□ -0.19
CSRP1-215ENST00000532313 MAST3O60307 1309 aa13.89□□□□□ -0.19
CSRP1-215ENST00000532313 FEZ1Q99689 392 aa13.88□□□□□ -0.19
CSRP1-215ENST00000532313 FANCIQ9NVI1 1328 aa13.88□□□□□ -0.19
CSRP1-215ENST00000532313 EXOC6Q8TAG9 804 aa13.88□□□□□ -0.19
CSRP1-215ENST00000532313 SH3TC1Q8TE82 1336 aa13.88□□□□□ -0.19
CSRP1-215ENST00000532313 PI4KAP2A4QPH2 592 aa13.88□□□□□ -0.19
CSRP1-215ENST00000532313 CCDC69A6NI79 296 aa13.88□□□□□ -0.19
CSRP1-215ENST00000532313 PI4KAP1Q8N8J0 262 aa13.88□□□□□ -0.19
CSRP1-215ENST00000532313 EHMT1Q9H9B1 1298 aa13.88□□□□□ -0.19
CSRP1-215ENST00000532313 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
CSRP1-215ENST00000532313 ANKRD1Q15327 319 aa13.88□□□□□ -0.19
CSRP1-215ENST00000532313 NOL8Q76FK4 1167 aaKnown RBP13.88□□□□□ -0.19
CSRP1-215ENST00000532313 TRIM37O94972 964 aa13.87□□□□□ -0.19
CSRP1-215ENST00000532313 PLCB2Q00722 1185 aa13.87□□□□□ -0.19
CSRP1-215ENST00000532313 ARHGEF25Q86VW2 580 aa13.87□□□□□ -0.19
CSRP1-215ENST00000532313 ZNF444Q8N0Y2 327 aaPredicted RBP13.87□□□□□ -0.19
CSRP1-215ENST00000532313 LINS1Q8NG48 757 aa13.87□□□□□ -0.19
CSRP1-215ENST00000532313 ATP5J2-PTCD1G3V325 749 aa13.87□□□□□ -0.19
CSRP1-215ENST00000532313 ERBB4Q15303 1308 aa13.87□□□□□ -0.19
CSRP1-215ENST00000532313 HSPA1LP34931 641 aa13.87□□□□□ -0.19
CSRP1-215ENST00000532313 CCDC178Q5BJE1 867 aa13.87□□□□□ -0.19
CSRP1-215ENST00000532313 DDX21Q9NR30 783 aaKnown RBP eCLIP13.87□□□□□ -0.19
CSRP1-215ENST00000532313 MBIPQ9NS73 344 aa13.87□□□□□ -0.19
CSRP1-215ENST00000532313 CDKL5O76039 1030 aa13.87□□□□□ -0.19
CSRP1-215ENST00000532313 MTMR7Q9Y216 660 aa13.87□□□□□ -0.19
CSRP1-215ENST00000532313 DIP2CQ9Y2E4 1556 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms