RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 FAM208AQ9UK61 1670 aaKnown RBP7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 ANKRD26Q9UPS8 1709 aa7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 MTHFSP49914 203 aa7.77□□□□□ -1.17
HMGB1P42-201ENST00000532126 IRF5Q13568 498 aa7.77□□□□□ -1.17
HMGB1P42-201ENST00000532126 TTLL12Q14166 644 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P42-201ENST00000532126 ZCRB1Q8TBF4 217 aaKnown RBP7.77□□□□□ -1.17
HMGB1P42-201ENST00000532126 TMC2Q8TDI7 906 aa7.77□□□□□ -1.17
HMGB1P42-201ENST00000532126 PLSCR2Q9NRY7 297 aa7.77□□□□□ -1.17
HMGB1P42-201ENST00000532126 MEGF6O75095 1541 aa7.77□□□□□ -1.17
HMGB1P42-201ENST00000532126 BCL9O00512 1426 aa7.77□□□□□ -1.17
HMGB1P42-201ENST00000532126 GPR37O15354 613 aa7.76□□□□□ -1.17
HMGB1P42-201ENST00000532126 EN1Q05925 392 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P42-201ENST00000532126 KCNA1Q09470 495 aa7.76□□□□□ -1.17
HMGB1P42-201ENST00000532126 ZNF428Q96B54 188 aa7.76□□□□□ -1.17
HMGB1P42-201ENST00000532126 IGSF1Q8N6C5 1336 aa7.76□□□□□ -1.17
HMGB1P42-201ENST00000532126 WNK3Q9BYP7 1800 aa7.75□□□□□ -1.17
HMGB1P42-201ENST00000532126 IL13P35225 146 aa7.75□□□□□ -1.17
HMGB1P42-201ENST00000532126 TIE1P35590 1138 aa7.75□□□□□ -1.17
HMGB1P42-201ENST00000532126 DDX10Q13206 875 aaKnown RBP7.75□□□□□ -1.17
HMGB1P42-201ENST00000532126 SH3D19Q5HYK7 790 aa7.75□□□□□ -1.17
HMGB1P42-201ENST00000532126 ACSBG1Q96GR2 724 aa7.75□□□□□ -1.17
HMGB1P42-201ENST00000532126 SPG7Q9UQ90 795 aa7.75□□□□□ -1.17
HMGB1P42-201ENST00000532126 PCDH11XQ9BZA7 1347 aa7.75□□□□□ -1.17
HMGB1P42-201ENST00000532126 PCDH11YQ9BZA8 1340 aa7.75□□□□□ -1.17
HMGB1P42-201ENST00000532126 GRXCR2A6NFK2 248 aa7.74□□□□□ -1.17
HMGB1P42-201ENST00000532126 KCNQ2O43526 872 aa7.74□□□□□ -1.17
HMGB1P42-201ENST00000532126 DIAPH1O60610 1272 aaKnown RBP7.74□□□□□ -1.17
HMGB1P42-201ENST00000532126 FOXK1P85037 733 aa7.74□□□□□ -1.17
HMGB1P42-201ENST00000532126 EZH2Q15910 746 aaKnown RBP7.74□□□□□ -1.17
HMGB1P42-201ENST00000532126 SULT6B1Q6IMI4 303 aa7.74□□□□□ -1.17
HMGB1P42-201ENST00000532126 PTF1AQ7RTS3 328 aa7.74□□□□□ -1.17
HMGB1P42-201ENST00000532126 CFAP53Q96M91 514 aa7.74□□□□□ -1.17
HMGB1P42-201ENST00000532126 CAMKK2Q96RR4 588 aa7.74□□□□□ -1.17
HMGB1P42-201ENST00000532126 NCAPD2Q15021 1401 aa7.74□□□□□ -1.17
HMGB1P42-201ENST00000532126 RGPD1P0DJD0 1748 aa7.74□□□□□ -1.17
HMGB1P42-201ENST00000532126 MAP2P11137 1827 aaKnown RBP7.73□□□□□ -1.17
HMGB1P42-201ENST00000532126 PARD3Q8TEW0 1356 aa7.73□□□□□ -1.17
HMGB1P42-201ENST00000532126 EP400Q96L91 3159 aa7.73□□□□□ -1.17
HMGB1P42-201ENST00000532126 TTLL13PA6NNM8 815 aa7.73□□□□□ -1.17
HMGB1P42-201ENST00000532126 PLSCR1O15162 318 aa7.73□□□□□ -1.17
HMGB1P42-201ENST00000532126 PPP2R1AP30153 589 aa7.73□□□□□ -1.17
HMGB1P42-201ENST00000532126 WWC1Q8IX03 1113 aa7.73□□□□□ -1.17
HMGB1P42-201ENST00000532126 SYTL4Q96C24 671 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P42-201ENST00000532126 RGPD2P0DJD1 1756 aa7.72□□□□□ -1.17
HMGB1P42-201ENST00000532126 CYP27B1O15528 508 aa7.72□□□□□ -1.17
HMGB1P42-201ENST00000532126 BRD1O95696 1058 aa7.72□□□□□ -1.17
HMGB1P42-201ENST00000532126 PRIM1P49642 420 aaKnown RBP7.72□□□□□ -1.17
HMGB1P42-201ENST00000532126 MAP3K9P80192 1104 aa7.72□□□□□ -1.17
HMGB1P42-201ENST00000532126 PLEKHO1Q53GL0 409 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P42-201ENST00000532126 PLPP6Q8IY26 295 aa7.72□□□□□ -1.17
HMGB1P42-201ENST00000532126 MICALL2Q8IY33 904 aa7.72□□□□□ -1.17
HMGB1P42-201ENST00000532126 ZNF330Q9Y3S2 320 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P42-201ENST00000532126 TNS1Q9HBL0 1735 aaKnown RBP7.72□□□□□ -1.17
HMGB1P42-201ENST00000532126 PLEKHG2Q9H7P9 1386 aa7.71□□□□□ -1.17
HMGB1P42-201ENST00000532126 SPDYE5A6NIY4 337 aa7.71□□□□□ -1.18
HMGB1P42-201ENST00000532126 U2SURPO15042 1029 aaKnown RBP7.71□□□□□ -1.18
HMGB1P42-201ENST00000532126 GNPATO15228 680 aa7.71□□□□□ -1.18
HMGB1P42-201ENST00000532126 HMOX1P09601 288 aa7.71□□□□□ -1.18
HMGB1P42-201ENST00000532126 AMOTQ4VCS5 1084 aa7.71□□□□□ -1.18
HMGB1P42-201ENST00000532126 DPY19L2Q6NUT2 758 aa7.71□□□□□ -1.18
HMGB1P42-201ENST00000532126 IFNL2Q8IZJ0 200 aa7.71□□□□□ -1.18
HMGB1P42-201ENST00000532126 POM121Q96HA1 1249 aa7.71□□□□□ -1.18
HMGB1P42-201ENST00000532126 KDRP35968 1356 aa7.71□□□□□ -1.18
HMGB1P42-201ENST00000532126 PHKG2P15735 406 aa7.7□□□□□ -1.18
HMGB1P42-201ENST00000532126 RALBP1Q15311 655 aa7.7□□□□□ -1.18
HMGB1P42-201ENST00000532126 TXNRD1Q16881 649 aa7.7□□□□□ -1.18
HMGB1P42-201ENST00000532126 C1orf141Q5JVX7 400 aa7.7□□□□□ -1.18
HMGB1P42-201ENST00000532126 NBPF14Q5TI25 921 aa7.7□□□□□ -1.18
HMGB1P42-201ENST00000532126 ZNF530Q6P9A1 599 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P42-201ENST00000532126 MPRIPQ6WCQ1 1025 aa7.7□□□□□ -1.18
HMGB1P42-201ENST00000532126 GIGYF2Q6Y7W6 1299 aaKnown RBP7.7□□□□□ -1.18
HMGB1P42-201ENST00000532126 NUDCQ9Y266 331 aa7.7□□□□□ -1.18
HMGB1P42-201ENST00000532126 COL3A1P02461 1466 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P42-201ENST00000532126 PSDA5PKW4 1024 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P42-201ENST00000532126 HAX1O00165 279 aa7.69□□□□□ -1.18
HMGB1P42-201ENST00000532126 HSP90AB1P08238 724 aaKnown RBP7.69□□□□□ -1.18
HMGB1P42-201ENST00000532126 HIC1Q14526 733 aa7.69□□□□□ -1.18
HMGB1P42-201ENST00000532126 SKIV2LQ15477 1246 aaKnown RBP7.69□□□□□ -1.18
HMGB1P42-201ENST00000532126 BMP2KQ9NSY1 1161 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P42-201ENST00000532126 TRIM35Q9UPQ4 493 aa7.69□□□□□ -1.18
HMGB1P42-201ENST00000532126 NHSQ6T4R5 1651 aa7.69□□□□□ -1.18
HMGB1P42-201ENST00000532126 FCHSD2O94868 740 aa7.68□□□□□ -1.18
HMGB1P42-201ENST00000532126 U2AF1L5P0DN76 240 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P42-201ENST00000532126 U2AF1Q01081 240 aaKnown RBP eCLIP7.68□□□□□ -1.18
HMGB1P42-201ENST00000532126 R3HDM1Q15032 1099 aaKnown RBP7.68□□□□□ -1.18
HMGB1P42-201ENST00000532126 CCDC27Q2M243 656 aa7.68□□□□□ -1.18
HMGB1P42-201ENST00000532126 DCAF5Q96JK2 942 aa7.68□□□□□ -1.18
HMGB1P42-201ENST00000532126 TMOD3Q9NYL9 352 aa7.68□□□□□ -1.18
HMGB1P42-201ENST00000532126 USTQ9Y2C2 406 aa7.68□□□□□ -1.18
HMGB1P42-201ENST00000532126 PKD1L3Q7Z443 1732 aa7.68□□□□□ -1.18
HMGB1P42-201ENST00000532126 SHANK3Q9BYB0 1731 aa7.67□□□□□ -1.18
HMGB1P42-201ENST00000532126 SBF2Q86WG5 1849 aa7.67□□□□□ -1.18
HMGB1P42-201ENST00000532126 G3V3G9 751 aa7.67□□□□□ -1.18
HMGB1P42-201ENST00000532126 MTHFSDQ2M296 383 aaKnown RBP7.67□□□□□ -1.18
HMGB1P42-201ENST00000532126 AKAP4Q5JQC9 854 aa7.67□□□□□ -1.18
HMGB1P42-201ENST00000532126 SLC27A3Q5K4L6 730 aa7.67□□□□□ -1.18
HMGB1P42-201ENST00000532126 PIGBQ92521 554 aa7.67□□□□□ -1.18
HMGB1P42-201ENST00000532126 STK32BQ9NY57 414 aa7.67□□□□□ -1.18
HMGB1P42-201ENST00000532126 COG6Q9Y2V7 657 aa7.67□□□□□ -1.18
HMGB1P42-201ENST00000532126 MYBBP1AQ9BQG0 1328 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms