RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 FAM196AQ6ZSG2 479 aa16.37■□□□□ 0.21
COPB1-208ENST00000532088 WDR63Q8IWG1 891 aa16.37■□□□□ 0.21
COPB1-208ENST00000532088 BABAM1Q9NWV8 329 aa16.37■□□□□ 0.21
COPB1-208ENST00000532088 IL16Q14005 1332 aa16.37■□□□□ 0.21
COPB1-208ENST00000532088 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
COPB1-208ENST00000532088 MPRIPQ6WCQ1 1025 aa16.36■□□□□ 0.21
COPB1-208ENST00000532088 TOGARAM1Q9Y4F4 1720 aa16.36■□□□□ 0.21
COPB1-208ENST00000532088 VIRMAQ69YN4 1812 aaKnown RBP16.35■□□□□ 0.21
COPB1-208ENST00000532088 SLC52A2Q9HAB3 445 aa16.35■□□□□ 0.21
COPB1-208ENST00000532088 LGR6Q9HBX8 967 aa16.35■□□□□ 0.21
COPB1-208ENST00000532088 DOT1LQ8TEK3 1739 aa16.34■□□□□ 0.21
COPB1-208ENST00000532088 MCM10Q7L590 875 aa16.34■□□□□ 0.21
COPB1-208ENST00000532088 MS4A4AQ96JQ5 239 aa16.34■□□□□ 0.21
COPB1-208ENST00000532088 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
COPB1-208ENST00000532088 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.21
COPB1-208ENST00000532088 TEFQ10587 303 aa16.33■□□□□ 0.2
COPB1-208ENST00000532088 CABP4P57796 275 aa16.32■□□□□ 0.2
COPB1-208ENST00000532088 IRX5P78411 483 aaPredicted RBP16.32■□□□□ 0.2
COPB1-208ENST00000532088 DCTN1Q14203 1278 aa16.32■□□□□ 0.2
COPB1-208ENST00000532088 TAF7Q15545 349 aaPredicted RBP16.32■□□□□ 0.2
COPB1-208ENST00000532088 IFT57Q9NWB7 429 aa16.32■□□□□ 0.2
COPB1-208ENST00000532088 SBF2Q86WG5 1849 aa16.31■□□□□ 0.2
COPB1-208ENST00000532088 ZNF853P0CG23 659 aa16.31■□□□□ 0.2
COPB1-208ENST00000532088 SLC39A7Q92504 469 aa16.31■□□□□ 0.2
COPB1-208ENST00000532088 TMOD3Q9NYL9 352 aa16.31■□□□□ 0.2
COPB1-208ENST00000532088 ITGB4P16144 1822 aa16.31■□□□□ 0.2
COPB1-208ENST00000532088 GNAI1P63096 354 aa16.3■□□□□ 0.2
COPB1-208ENST00000532088 E9PSI1 815 aa16.29■□□□□ 0.2
COPB1-208ENST00000532088 CHL1O00533 1208 aa16.29■□□□□ 0.2
COPB1-208ENST00000532088 C7P10643 843 aa16.29■□□□□ 0.2
COPB1-208ENST00000532088 PRIM1P49642 420 aaKnown RBP16.29■□□□□ 0.2
COPB1-208ENST00000532088 NFATC2IPQ8NCF5 419 aa16.29■□□□□ 0.2
COPB1-208ENST00000532088 THUMPD2Q9BTF0 503 aaKnown RBP16.29■□□□□ 0.2
COPB1-208ENST00000532088 SALL2Q9Y467 1007 aaPredicted RBP16.29■□□□□ 0.2
COPB1-208ENST00000532088 PAPPAQ13219 1627 aa16.29■□□□□ 0.2
COPB1-208ENST00000532088 PIGBQ92521 554 aa16.28■□□□□ 0.2
COPB1-208ENST00000532088 BTBD11A6QL63 1104 aa16.27■□□□□ 0.2
COPB1-208ENST00000532088 OCEL1Q9H607 264 aa16.27■□□□□ 0.2
COPB1-208ENST00000532088 MYH16Q9H6N6 1097 aa16.27■□□□□ 0.2
COPB1-208ENST00000532088 KDM3BQ7LBC6 1761 aa16.27■□□□□ 0.2
COPB1-208ENST00000532088 SLFN5Q08AF3 891 aa16.26■□□□□ 0.19
COPB1-208ENST00000532088 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
COPB1-208ENST00000532088 PDCD7Q8N8D1 485 aaKnown RBP16.26■□□□□ 0.19
COPB1-208ENST00000532088 SMARCC1Q92922 1105 aaPredicted RBP16.26■□□□□ 0.19
COPB1-208ENST00000532088 ACSBG1Q96GR2 724 aa16.26■□□□□ 0.19
COPB1-208ENST00000532088 PPP1R37O75864 691 aa16.25■□□□□ 0.19
COPB1-208ENST00000532088 TRMT2AQ8IZ69 625 aaKnown RBP16.25■□□□□ 0.19
COPB1-208ENST00000532088 SYTL4Q96C24 671 aaPredicted RBP16.25■□□□□ 0.19
COPB1-208ENST00000532088 TSPYL4Q9UJ04 414 aa16.25■□□□□ 0.19
COPB1-208ENST00000532088 UBR2Q8IWV8 1755 aa16.24■□□□□ 0.19
COPB1-208ENST00000532088 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
COPB1-208ENST00000532088 KCNQ2O43526 872 aa16.24■□□□□ 0.19
COPB1-208ENST00000532088 ZNF790Q6PG37 636 aa16.24■□□□□ 0.19
COPB1-208ENST00000532088 BTAF1O14981 1849 aa16.24■□□□□ 0.19
COPB1-208ENST00000532088 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
COPB1-208ENST00000532088 CCDC125Q86Z20 511 aa16.23■□□□□ 0.19
COPB1-208ENST00000532088 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
COPB1-208ENST00000532088 TSHZ2Q9NRE2 1034 aa16.23■□□□□ 0.19
COPB1-208ENST00000532088 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
COPB1-208ENST00000532088 ATG3Q9NT62 314 aa16.23■□□□□ 0.19
COPB1-208ENST00000532088 ZNF831Q5JPB2 1677 aa16.23■□□□□ 0.19
COPB1-208ENST00000532088 HEG1Q9ULI3 1381 aa16.23■□□□□ 0.19
COPB1-208ENST00000532088 RGPD3A6NKT7 1758 aaPredicted RBP16.23■□□□□ 0.19
COPB1-208ENST00000532088 RGPD4Q7Z3J3 1758 aa16.23■□□□□ 0.19
COPB1-208ENST00000532088 CICQ96RK0 1608 aaPredicted RBP16.23■□□□□ 0.19
COPB1-208ENST00000532088 TNS1Q9HBL0 1735 aaKnown RBP16.22■□□□□ 0.19
COPB1-208ENST00000532088 HMGB2P26583 209 aaKnown RBP16.22■□□□□ 0.19
COPB1-208ENST00000532088 VSIG10Q8N0Z9 540 aa16.22■□□□□ 0.19
COPB1-208ENST00000532088 METRNQ9UJH8 293 aa16.22■□□□□ 0.19
COPB1-208ENST00000532088 KCPQ6ZWJ8 1503 aa16.22■□□□□ 0.19
COPB1-208ENST00000532088 FANCIQ9NVI1 1328 aa16.21■□□□□ 0.19
COPB1-208ENST00000532088 PLSCR1O15162 318 aa16.21■□□□□ 0.19
COPB1-208ENST00000532088 TRIM37O94972 964 aa16.21■□□□□ 0.19
COPB1-208ENST00000532088 PLCG2P16885 1265 aa16.21■□□□□ 0.19
COPB1-208ENST00000532088 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
COPB1-208ENST00000532088 COLQQ9Y215 455 aaPredicted RBP16.21■□□□□ 0.19
COPB1-208ENST00000532088 LAS1LQ9Y4W2 734 aaKnown RBP16.21■□□□□ 0.19
COPB1-208ENST00000532088 PALLDQ8WX93 1383 aa16.21■□□□□ 0.19
COPB1-208ENST00000532088 POTEFA5A3E0 1075 aa16.2■□□□□ 0.18
COPB1-208ENST00000532088 HOXB7P09629 217 aa16.2■□□□□ 0.18
COPB1-208ENST00000532088 EIF4A1P60842 406 aaKnown RBP16.2■□□□□ 0.18
COPB1-208ENST00000532088 DUSP27Q5VZP5 1158 aa16.2■□□□□ 0.18
COPB1-208ENST00000532088 DPY19L2Q6NUT2 758 aa16.2■□□□□ 0.18
COPB1-208ENST00000532088 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
COPB1-208ENST00000532088 ASAP1Q9ULH1 1129 aa16.2■□□□□ 0.18
COPB1-208ENST00000532088 KAT6BQ8WYB5 2073 aa16.2■□□□□ 0.18
COPB1-208ENST00000532088 LY75O60449 1722 aa16.19■□□□□ 0.18
COPB1-208ENST00000532088 SEC24BO95487 1268 aa16.19■□□□□ 0.18
COPB1-208ENST00000532088 SLC39A6Q13433 755 aa16.19■□□□□ 0.18
COPB1-208ENST00000532088 CDCA7LQ96GN5 454 aa16.19■□□□□ 0.18
COPB1-208ENST00000532088 CHMP4AQ9BY43 222 aa16.19■□□□□ 0.18
COPB1-208ENST00000532088 MIS18AQ9NYP9 233 aa16.19■□□□□ 0.18
COPB1-208ENST00000532088 CT47B1P0C2W7 299 aaPredicted RBP16.18■□□□□ 0.18
COPB1-208ENST00000532088 PTF1AQ7RTS3 328 aa16.18■□□□□ 0.18
COPB1-208ENST00000532088 TEX13AQ9BXU3 409 aaPredicted RBP16.18■□□□□ 0.18
COPB1-208ENST00000532088 KCNQ3O43525 872 aa16.17■□□□□ 0.18
COPB1-208ENST00000532088 SLC27A3Q5K4L6 730 aa16.17■□□□□ 0.18
COPB1-208ENST00000532088 TSR2Q969E8 191 aaKnown RBP16.17■□□□□ 0.18
COPB1-208ENST00000532088 ZNF496Q96IT1 587 aaPredicted RBP16.17■□□□□ 0.18
COPB1-208ENST00000532088 LOC102724428A0A0B4J2F2 783 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms