RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 SLC27A3Q5K4L6 730 aa11.96□□□□□ -0.49
PTP4A2-213ENST00000532001 ZCRB1Q8TBF4 217 aaKnown RBP11.96□□□□□ -0.49
PTP4A2-213ENST00000532001 CARD14Q9BXL6 1004 aa11.96□□□□□ -0.49
PTP4A2-213ENST00000532001 PPP1R1BQ9UD71 204 aaPredicted RBP11.96□□□□□ -0.49
PTP4A2-213ENST00000532001 ZNF316A6NFI3 1004 aaPredicted RBP11.95□□□□□ -0.5
PTP4A2-213ENST00000532001 PTGER2P43116 358 aa11.95□□□□□ -0.5
PTP4A2-213ENST00000532001 NBPF6Q5VWK0 638 aa11.95□□□□□ -0.5
PTP4A2-213ENST00000532001 DDX54Q8TDD1 881 aaKnown RBP11.95□□□□□ -0.5
PTP4A2-213ENST00000532001 NBPF4Q96M43 638 aa11.95□□□□□ -0.5
PTP4A2-213ENST00000532001 PDGFDQ9GZP0 370 aaPredicted RBP11.95□□□□□ -0.5
PTP4A2-213ENST00000532001 MTFR1LQ9H019 292 aa11.95□□□□□ -0.5
PTP4A2-213ENST00000532001 PPP1R15BQ5SWA1 713 aa11.94□□□□□ -0.5
PTP4A2-213ENST00000532001 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
PTP4A2-213ENST00000532001 PLEKHG2Q9H7P9 1386 aa11.93□□□□□ -0.5
PTP4A2-213ENST00000532001 ITGB4P16144 1822 aa11.93□□□□□ -0.5
PTP4A2-213ENST00000532001 ZBTB7AO95365 584 aa11.93□□□□□ -0.5
PTP4A2-213ENST00000532001 HSP90AB2PQ58FF8 381 aa11.93□□□□□ -0.5
PTP4A2-213ENST00000532001 RAPGEF4Q8WZA2 1011 aa11.93□□□□□ -0.5
PTP4A2-213ENST00000532001 LRRC4BQ9NT99 713 aa11.93□□□□□ -0.5
PTP4A2-213ENST00000532001 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
PTP4A2-213ENST00000532001 PCDH11XQ9BZA7 1347 aa11.92□□□□□ -0.5
PTP4A2-213ENST00000532001 PCDH11YQ9BZA8 1340 aa11.92□□□□□ -0.5
PTP4A2-213ENST00000532001 C5P01031 1676 aa11.92□□□□□ -0.5
PTP4A2-213ENST00000532001 TATP17735 454 aaPredicted RBP11.92□□□□□ -0.5
PTP4A2-213ENST00000532001 ZNF827Q17R98 1081 aa11.92□□□□□ -0.5
PTP4A2-213ENST00000532001 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
PTP4A2-213ENST00000532001 TAF1LQ8IZX4 1826 aa11.92□□□□□ -0.5
PTP4A2-213ENST00000532001 WASHC2AQ641Q2 1341 aa11.91□□□□□ -0.5
PTP4A2-213ENST00000532001 PRIM1P49642 420 aaKnown RBP11.91□□□□□ -0.5
PTP4A2-213ENST00000532001 EMILIN1Q9Y6C2 1016 aa11.91□□□□□ -0.5
PTP4A2-213ENST00000532001 MFSD10Q14728 455 aa11.9□□□□□ -0.5
PTP4A2-213ENST00000532001 USHBP1Q8N6Y0 703 aa11.9□□□□□ -0.5
PTP4A2-213ENST00000532001 SLC16A10Q8TF71 515 aa11.9□□□□□ -0.5
PTP4A2-213ENST00000532001 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
PTP4A2-213ENST00000532001 EIF4G2P78344 907 aaKnown RBP eCLIP11.89□□□□□ -0.51
PTP4A2-213ENST00000532001 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
PTP4A2-213ENST00000532001 DDX27Q96GQ7 796 aaKnown RBP11.89□□□□□ -0.51
PTP4A2-213ENST00000532001 LARP6Q9BRS8 491 aaKnown RBP11.89□□□□□ -0.51
PTP4A2-213ENST00000532001 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
PTP4A2-213ENST00000532001 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
PTP4A2-213ENST00000532001 HMGB2P26583 209 aaKnown RBP11.88□□□□□ -0.51
PTP4A2-213ENST00000532001 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
PTP4A2-213ENST00000532001 OXER1Q8TDS5 423 aa11.88□□□□□ -0.51
PTP4A2-213ENST00000532001 SYTL4Q96C24 671 aaPredicted RBP11.88□□□□□ -0.51
PTP4A2-213ENST00000532001 CHD4Q14839 1912 aa11.88□□□□□ -0.51
PTP4A2-213ENST00000532001 CYP27B1O15528 508 aa11.87□□□□□ -0.51
PTP4A2-213ENST00000532001 TBC1D12O60347 775 aa11.87□□□□□ -0.51
PTP4A2-213ENST00000532001 HSPA5P11021 654 aaKnown RBP11.87□□□□□ -0.51
PTP4A2-213ENST00000532001 POLKQ9UBT6 870 aa11.87□□□□□ -0.51
PTP4A2-213ENST00000532001 ARXQ96QS3 562 aa11.86□□□□□ -0.51
PTP4A2-213ENST00000532001 SYT17Q9BSW7 474 aa11.86□□□□□ -0.51
PTP4A2-213ENST00000532001 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
PTP4A2-213ENST00000532001 CCNL1Q9UK58 526 aaPredicted RBP11.86□□□□□ -0.51
PTP4A2-213ENST00000532001 C4BP0C0L5 1744 aa11.86□□□□□ -0.51
PTP4A2-213ENST00000532001 UBR3Q6ZT12 1888 aa11.85□□□□□ -0.51
PTP4A2-213ENST00000532001 PALLDQ8WX93 1383 aa11.85□□□□□ -0.51
PTP4A2-213ENST00000532001 EYA1Q99502 592 aa11.85□□□□□ -0.51
PTP4A2-213ENST00000532001 ZNF831Q5JPB2 1677 aa11.84□□□□□ -0.51
PTP4A2-213ENST00000532001 YY1P25490 414 aa11.84□□□□□ -0.51
PTP4A2-213ENST00000532001 SMARCC1Q92922 1105 aaPredicted RBP11.84□□□□□ -0.51
PTP4A2-213ENST00000532001 TFCP2L1Q9NZI6 479 aa11.84□□□□□ -0.51
PTP4A2-213ENST00000532001 SPG7Q9UQ90 795 aa11.84□□□□□ -0.51
PTP4A2-213ENST00000532001 IGSF1Q8N6C5 1336 aa11.84□□□□□ -0.51
PTP4A2-213ENST00000532001 UTRNP46939 3433 aa11.83□□□□□ -0.51
PTP4A2-213ENST00000532001 PPM1GO15355 546 aaPredicted RBP11.83□□□□□ -0.52
PTP4A2-213ENST00000532001 KCNQ4P56696 695 aa11.83□□□□□ -0.52
PTP4A2-213ENST00000532001 MMRN1Q13201 1228 aa11.83□□□□□ -0.52
PTP4A2-213ENST00000532001 EIF4A2Q14240 407 aaKnown RBP11.83□□□□□ -0.52
PTP4A2-213ENST00000532001 PANK3Q9H999 370 aa11.83□□□□□ -0.52
PTP4A2-213ENST00000532001 POLD1P28340 1107 aa11.82□□□□□ -0.52
PTP4A2-213ENST00000532001 POLR3GLQ9BT43 218 aa11.82□□□□□ -0.52
PTP4A2-213ENST00000532001 MPRIPQ6WCQ1 1025 aa11.81□□□□□ -0.52
PTP4A2-213ENST00000532001 FLAD1Q8NFF5 587 aa11.81□□□□□ -0.52
PTP4A2-213ENST00000532001 PHKG2P15735 406 aa11.8□□□□□ -0.52
PTP4A2-213ENST00000532001 COL23A1Q86Y22 540 aaPredicted RBP11.8□□□□□ -0.52
PTP4A2-213ENST00000532001 IFNL2Q8IZJ0 200 aa11.8□□□□□ -0.52
PTP4A2-213ENST00000532001 PIGBQ92521 554 aa11.8□□□□□ -0.52
PTP4A2-213ENST00000532001 CICQ96RK0 1608 aaPredicted RBP11.79□□□□□ -0.52
PTP4A2-213ENST00000532001 PBX2P40425 430 aa11.79□□□□□ -0.52
PTP4A2-213ENST00000532001 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
PTP4A2-213ENST00000532001 COL5A3P25940 1745 aaPredicted RBP11.79□□□□□ -0.52
PTP4A2-213ENST00000532001 KDRP35968 1356 aa11.79□□□□□ -0.52
PTP4A2-213ENST00000532001 TNNT2P45379 298 aaPredicted RBP11.78□□□□□ -0.52
PTP4A2-213ENST00000532001 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
PTP4A2-213ENST00000532001 LOC102724428A0A0B4J2F2 783 aa11.77□□□□□ -0.53
PTP4A2-213ENST00000532001 HSP90AB1P08238 724 aaKnown RBP11.77□□□□□ -0.53
PTP4A2-213ENST00000532001 SIK1P57059 783 aa11.77□□□□□ -0.53
PTP4A2-213ENST00000532001 MORC1Q86VD1 984 aa11.77□□□□□ -0.53
PTP4A2-213ENST00000532001 KIF7Q2M1P5 1343 aa11.77□□□□□ -0.53
PTP4A2-213ENST00000532001 SCN11AQ9UI33 1791 aa11.77□□□□□ -0.53
PTP4A2-213ENST00000532001 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.53
PTP4A2-213ENST00000532001 ERVV-2B6SEH9 535 aa11.76□□□□□ -0.53
PTP4A2-213ENST00000532001 SSFA2P28290 1259 aa11.76□□□□□ -0.53
PTP4A2-213ENST00000532001 POTEEQ6S8J3 1075 aa11.76□□□□□ -0.53
PTP4A2-213ENST00000532001 AK7Q96M32 723 aa11.76□□□□□ -0.53
PTP4A2-213ENST00000532001 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
PTP4A2-213ENST00000532001 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
PTP4A2-213ENST00000532001 KNSTRNQ9Y448 316 aa11.76□□□□□ -0.53
PTP4A2-213ENST00000532001 GOLGB1Q14789 3259 aaKnown RBP11.76□□□□□ -0.53
PTP4A2-213ENST00000532001 VIRMAQ69YN4 1812 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms