RNA–Protein interactions for RNA: ENST00000531939.5

IFT46-209, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-209ENST00000531939 LYPD4Q6UWN0 246 aa10.47□□□□□ -0.73
IFT46-209ENST00000531939 GMCL1Q96IK5 515 aa10.47□□□□□ -0.73
IFT46-209ENST00000531939 SYCP2Q9BX26 1530 aa10.47□□□□□ -0.73
IFT46-209ENST00000531939 PTGIRP43119 386 aa10.46□□□□□ -0.73
IFT46-209ENST00000531939 LYSMD3Q7Z3D4 306 aa10.46□□□□□ -0.73
IFT46-209ENST00000531939 ZNF784Q8NCA9 323 aaPredicted RBP10.46□□□□□ -0.73
IFT46-209ENST00000531939 CNTLNQ9NXG0 1405 aa10.46□□□□□ -0.74
IFT46-209ENST00000531939 MROH2AA6NES4 1674 aa10.46□□□□□ -0.74
IFT46-209ENST00000531939 PLXNC1O60486 1568 aa10.45□□□□□ -0.74
IFT46-209ENST00000531939 INO80Q9ULG1 1556 aaPredicted RBP10.45□□□□□ -0.74
IFT46-209ENST00000531939 PTPRTO14522 1441 aa10.45□□□□□ -0.74
IFT46-209ENST00000531939 OCSTAMPQ9BR26 566 aa10.45□□□□□ -0.74
IFT46-209ENST00000531939 TMPRSS4Q9NRS4 437 aa10.45□□□□□ -0.74
IFT46-209ENST00000531939 NCOA1Q15788 1441 aa10.44□□□□□ -0.74
IFT46-209ENST00000531939 KIAA1107Q9UPP5 1409 aa10.44□□□□□ -0.74
IFT46-209ENST00000531939 CELA2BP08218 269 aaPredicted RBP10.44□□□□□ -0.74
IFT46-209ENST00000531939 SKIV2LQ15477 1246 aaKnown RBP10.44□□□□□ -0.74
IFT46-209ENST00000531939 SUPT6HQ7KZ85 1726 aaKnown RBP10.44□□□□□ -0.74
IFT46-209ENST00000531939 ATP7AQ04656 1500 aa10.43□□□□□ -0.74
IFT46-209ENST00000531939 PHF20L1A8MW92 1017 aa10.43□□□□□ -0.74
IFT46-209ENST00000531939 LILRA1O75019 489 aa10.43□□□□□ -0.74
IFT46-209ENST00000531939 HNRNPMP52272 730 aaKnown RBP eCLIP10.43□□□□□ -0.74
IFT46-209ENST00000531939 FOXD4L5Q5VV16 416 aaPredicted RBP10.43□□□□□ -0.74
IFT46-209ENST00000531939 FOXR1Q6PIV2 292 aa10.43□□□□□ -0.74
IFT46-209ENST00000531939 DZIP3Q86Y13 1208 aaKnown RBP10.43□□□□□ -0.74
IFT46-209ENST00000531939 ZNF777Q9ULD5 760 aaPredicted RBP10.43□□□□□ -0.74
IFT46-209ENST00000531939 LTBP4Q8N2S1 1624 aa10.43□□□□□ -0.74
IFT46-209ENST00000531939 NPATQ14207 1427 aa10.42□□□□□ -0.74
IFT46-209ENST00000531939 SPAG9O60271 1321 aaKnown RBP10.42□□□□□ -0.74
IFT46-209ENST00000531939 ADD1P35611 737 aaKnown RBP10.42□□□□□ -0.74
IFT46-209ENST00000531939 PPP2R2DQ66LE6 453 aa10.42□□□□□ -0.74
IFT46-209ENST00000531939 SLC24A3Q9HC58 644 aa10.42□□□□□ -0.74
IFT46-209ENST00000531939 PLEKHH2Q8IVE3 1493 aa10.42□□□□□ -0.74
IFT46-209ENST00000531939 ZMYM3Q14202 1370 aa10.41□□□□□ -0.74
IFT46-209ENST00000531939 CLTCQ00610 1675 aaKnown RBP10.41□□□□□ -0.74
IFT46-209ENST00000531939 TIAM1Q13009 1591 aa10.41□□□□□ -0.74
IFT46-209ENST00000531939 ERVH48-1M5A8F1 160 aa10.41□□□□□ -0.74
IFT46-209ENST00000531939 RAB15P59190 212 aa10.41□□□□□ -0.74
IFT46-209ENST00000531939 GAS6Q14393 721 aa10.41□□□□□ -0.74
IFT46-209ENST00000531939 ESF1Q9H501 851 aaKnown RBP10.41□□□□□ -0.74
IFT46-209ENST00000531939 MBIPQ9NS73 344 aa10.41□□□□□ -0.74
IFT46-209ENST00000531939 A2MP01023 1474 aa10.41□□□□□ -0.74
IFT46-209ENST00000531939 RNF144AP50876 292 aaPredicted RBP10.4□□□□□ -0.74
IFT46-209ENST00000531939 SEPT12Q8IYM1 358 aa10.4□□□□□ -0.74
IFT46-209ENST00000531939 BEND7Q8N7W2 519 aaPredicted RBP10.4□□□□□ -0.74
IFT46-209ENST00000531939 KDF1Q8NAX2 398 aaPredicted RBP10.4□□□□□ -0.74
IFT46-209ENST00000531939 CFDP1Q9UEE9 299 aaPredicted RBP10.4□□□□□ -0.74
IFT46-209ENST00000531939 ZNF142P52746 1687 aaPredicted RBP10.4□□□□□ -0.74
IFT46-209ENST00000531939 CAMSAP1Q5T5Y3 1602 aa10.4□□□□□ -0.75
IFT46-209ENST00000531939 CCNB3Q8WWL7 1395 aa10.39□□□□□ -0.75
IFT46-209ENST00000531939 ADGBQ8N7X0 1667 aa10.39□□□□□ -0.75
IFT46-209ENST00000531939 MBD5Q9P267 1494 aa10.39□□□□□ -0.75
IFT46-209ENST00000531939 ESPNB1AK53 854 aa10.39□□□□□ -0.75
IFT46-209ENST00000531939 TRIM22Q8IYM9 498 aa10.39□□□□□ -0.75
IFT46-209ENST00000531939 CUEDC1Q9NWM3 386 aaPredicted RBP10.39□□□□□ -0.75
IFT46-209ENST00000531939 MYO3AQ8NEV4 1616 aa10.39□□□□□ -0.75
IFT46-209ENST00000531939 PTPRKQ15262 1439 aa10.39□□□□□ -0.75
IFT46-209ENST00000531939 IQSEC2Q5JU85 1478 aa10.38□□□□□ -0.75
IFT46-209ENST00000531939 MSTNO14793 375 aa10.38□□□□□ -0.75
IFT46-209ENST00000531939 SH3D19Q5HYK7 790 aa10.38□□□□□ -0.75
IFT46-209ENST00000531939 PRICKLE2Q7Z3G6 844 aa10.38□□□□□ -0.75
IFT46-209ENST00000531939 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.38□□□□□ -0.75
IFT46-209ENST00000531939 MTUS2Q5JR59 1369 aa10.38□□□□□ -0.75
IFT46-209ENST00000531939 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
IFT46-209ENST00000531939 ZNF644Q9H582 1327 aaPredicted RBP10.37□□□□□ -0.75
IFT46-209ENST00000531939 AP1G2O75843 785 aa10.37□□□□□ -0.75
IFT46-209ENST00000531939 PODNQ7Z5L7 613 aa10.37□□□□□ -0.75
IFT46-209ENST00000531939 CEP170BQ9Y4F5 1589 aaPredicted RBP10.36□□□□□ -0.75
IFT46-209ENST00000531939 CEP162Q5TB80 1403 aa10.36□□□□□ -0.75
IFT46-209ENST00000531939 H7C1W4 665 aa10.36□□□□□ -0.75
IFT46-209ENST00000531939 GPC1P35052 558 aa10.36□□□□□ -0.75
IFT46-209ENST00000531939 ZNF837Q96EG3 531 aaPredicted RBP10.36□□□□□ -0.75
IFT46-209ENST00000531939 PLA2R1Q13018 1463 aa10.36□□□□□ -0.75
IFT46-209ENST00000531939 TCOF1Q13428 1488 aaKnown RBP10.36□□□□□ -0.75
IFT46-209ENST00000531939 RTEL1-TNFRSF6BF6WH68 1400 aa10.35□□□□□ -0.75
IFT46-209ENST00000531939 BCRP11274 1271 aa10.35□□□□□ -0.75
IFT46-209ENST00000531939 CCDC125Q86Z20 511 aa10.35□□□□□ -0.75
IFT46-209ENST00000531939 NEDD1Q8NHV4 660 aa10.35□□□□□ -0.75
IFT46-209ENST00000531939 DCAF5Q96JK2 942 aa10.35□□□□□ -0.75
IFT46-209ENST00000531939 LRRC4BQ9NT99 713 aa10.35□□□□□ -0.75
IFT46-209ENST00000531939 PLA2G4EQ3MJ16 856 aa10.34□□□□□ -0.75
IFT46-209ENST00000531939 GGT6Q6P531 493 aa10.34□□□□□ -0.75
IFT46-209ENST00000531939 PROCA1Q8NCQ7 364 aaPredicted RBP10.34□□□□□ -0.75
IFT46-209ENST00000531939 TRERF1Q96PN7 1200 aa10.34□□□□□ -0.75
IFT46-209ENST00000531939 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
IFT46-209ENST00000531939 ATP5J2-PTCD1G3V325 749 aa10.33□□□□□ -0.76
IFT46-209ENST00000531939 RHOQP17081 205 aa10.33□□□□□ -0.76
IFT46-209ENST00000531939 RIPOR1Q6ZS17 1223 aa10.33□□□□□ -0.76
IFT46-209ENST00000531939 CYLDQ9NQC7 956 aa10.33□□□□□ -0.76
IFT46-209ENST00000531939 DYRK1BQ9Y463 629 aa10.33□□□□□ -0.76
IFT46-209ENST00000531939 DHX29Q7Z478 1369 aaKnown RBP10.33□□□□□ -0.76
IFT46-209ENST00000531939 DBN1Q16643 649 aa10.32□□□□□ -0.76
IFT46-209ENST00000531939 FBXO31Q5XUX0 539 aaPredicted RBP10.32□□□□□ -0.76
IFT46-209ENST00000531939 ILDR2Q71H61 639 aa10.32□□□□□ -0.76
IFT46-209ENST00000531939 DDRGK1Q96HY6 314 aa10.32□□□□□ -0.76
IFT46-209ENST00000531939 NSFL1CQ9UNZ2 370 aaKnown RBP10.32□□□□□ -0.76
IFT46-209ENST00000531939 DNMT1P26358 1616 aaKnown RBP10.32□□□□□ -0.76
IFT46-209ENST00000531939 ZNF335Q9H4Z2 1342 aaPredicted RBP10.32□□□□□ -0.76
IFT46-209ENST00000531939 A2ML1A8K2U0 1454 aa10.31□□□□□ -0.76
IFT46-209ENST00000531939 CAMSAP2Q08AD1 1489 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms