RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	INO80	Q9ULG1	1556 aa	Predicted RBP	9.33	□□□□□ -0.92
PUM1-222	ENST00000531867	ATP7A	Q04656	1500 aa		9.33	□□□□□ -0.92
PUM1-222	ENST00000531867	POTEA	Q6S8J7	498 aa		9.33	□□□□□ -0.92
PUM1-222	ENST00000531867	LINC00528	Q8N1L1	170 aa		9.33	□□□□□ -0.92
PUM1-222	ENST00000531867	ZFP42	Q96MM3	310 aa		9.33	□□□□□ -0.92
PUM1-222	ENST00000531867	TSEN34	Q9BSV6	310 aa	Known RBP	9.33	□□□□□ -0.92
PUM1-222	ENST00000531867	RNF17	Q9BXT8	1623 aa	Known RBP	9.33	□□□□□ -0.92
PUM1-222	ENST00000531867	ARHGAP35	Q9NRY4	1499 aa		9.33	□□□□□ -0.92
PUM1-222	ENST00000531867	SPAG9	O60271	1321 aa	Known RBP	9.32	□□□□□ -0.92
PUM1-222	ENST00000531867	ANKLE2	Q86XL3	938 aa		9.32	□□□□□ -0.92
PUM1-222	ENST00000531867	SYNM	O15061	1565 aa		9.32	□□□□□ -0.92
PUM1-222	ENST00000531867	NPHP4	O75161	1426 aa	Predicted RBP	9.31	□□□□□ -0.92
PUM1-222	ENST00000531867	KIAA1107	Q9UPP5	1409 aa		9.31	□□□□□ -0.92
PUM1-222	ENST00000531867	SNRPB	P14678	240 aa	Known RBP	9.31	□□□□□ -0.92
PUM1-222	ENST00000531867	RAB15	P59190	212 aa		9.31	□□□□□ -0.92
PUM1-222	ENST00000531867	EIF4G2	P78344	907 aa	Known RBP eCLIP	9.31	□□□□□ -0.92
PUM1-222	ENST00000531867		Q6ZVU0	165 aa		9.31	□□□□□ -0.92
PUM1-222	ENST00000531867	PURB	Q96QR8	312 aa	Known RBP	9.31	□□□□□ -0.92
PUM1-222	ENST00000531867	SYCP2	Q9BX26	1530 aa		9.31	□□□□□ -0.92
PUM1-222	ENST00000531867	ADGB	Q8N7X0	1667 aa		9.3	□□□□□ -0.92
PUM1-222	ENST00000531867	TNR	Q92752	1358 aa		9.3	□□□□□ -0.92
PUM1-222	ENST00000531867	ERVH48-1	M5A8F1	160 aa		9.3	□□□□□ -0.92
PUM1-222	ENST00000531867	ABL2	P42684	1182 aa		9.3	□□□□□ -0.92
PUM1-222	ENST00000531867	WASHC4	Q2M389	1173 aa		9.3	□□□□□ -0.92
PUM1-222	ENST00000531867	GGT6	Q6P531	493 aa		9.3	□□□□□ -0.92
PUM1-222	ENST00000531867	GDPD2	Q9HCC8	539 aa		9.3	□□□□□ -0.92
PUM1-222	ENST00000531867	IQGAP1	P46940	1657 aa		9.29	□□□□□ -0.92
PUM1-222	ENST00000531867	PZP	P20742	1482 aa		9.29	□□□□□ -0.92
PUM1-222	ENST00000531867	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	9.29	□□□□□ -0.92
PUM1-222	ENST00000531867	BMP2	P12643	396 aa		9.29	□□□□□ -0.92
PUM1-222	ENST00000531867	IRF5	Q13568	498 aa		9.29	□□□□□ -0.92
PUM1-222	ENST00000531867	C6orf118	Q5T5N4	469 aa		9.29	□□□□□ -0.92
PUM1-222	ENST00000531867	WWC1	Q8IX03	1113 aa		9.29	□□□□□ -0.92
PUM1-222	ENST00000531867	THEMIS	Q8N1K5	641 aa	Predicted RBP	9.29	□□□□□ -0.92
PUM1-222	ENST00000531867	ZNF784	Q8NCA9	323 aa	Predicted RBP	9.29	□□□□□ -0.92
PUM1-222	ENST00000531867	ZNF775	Q96BV0	537 aa	Predicted RBP	9.29	□□□□□ -0.92
PUM1-222	ENST00000531867	FAM135A	Q9P2D6	1515 aa		9.29	□□□□□ -0.92
PUM1-222	ENST00000531867	NLRP1	Q9C000	1473 aa		9.28	□□□□□ -0.92
PUM1-222	ENST00000531867	GPATCH8	Q9UKJ3	1502 aa	Known RBP	9.28	□□□□□ -0.92
PUM1-222	ENST00000531867	GIGYF1	O75420	1035 aa	Predicted RBP	9.28	□□□□□ -0.92
PUM1-222	ENST00000531867	HNRNPM	P52272	730 aa	Known RBP eCLIP	9.28	□□□□□ -0.92
PUM1-222	ENST00000531867	FAM135B	Q49AJ0	1406 aa		9.28	□□□□□ -0.92
PUM1-222	ENST00000531867	XIRP1	Q702N8	1843 aa	Known RBP	9.28	□□□□□ -0.92
PUM1-222	ENST00000531867	PLEKHH2	Q8IVE3	1493 aa		9.28	□□□□□ -0.92
PUM1-222	ENST00000531867	RAD21	O60216	631 aa		9.27	□□□□□ -0.93
PUM1-222	ENST00000531867	CBLB	Q13191	982 aa		9.27	□□□□□ -0.93
PUM1-222	ENST00000531867	TMPRSS4	Q9NRS4	437 aa		9.27	□□□□□ -0.93
PUM1-222	ENST00000531867	MIA2	Q96PC5	1412 aa		9.27	□□□□□ -0.93
PUM1-222	ENST00000531867	CCDC18	Q5T9S5	1454 aa		9.27	□□□□□ -0.93
PUM1-222	ENST00000531867	ZC3H13	Q5T200	1668 aa	Known RBP	9.26	□□□□□ -0.93
PUM1-222	ENST00000531867	SETD1A	O15047	1707 aa	Known RBP	9.26	□□□□□ -0.93
PUM1-222	ENST00000531867	UGGT1	Q9NYU2	1555 aa		9.26	□□□□□ -0.93
PUM1-222	ENST00000531867	SOX11	P35716	441 aa		9.26	□□□□□ -0.93
PUM1-222	ENST00000531867	COG6	Q9Y2V7	657 aa		9.26	□□□□□ -0.93
PUM1-222	ENST00000531867	RTEL1-TNFRSF6B	F6WH68	1400 aa		9.25	□□□□□ -0.93
PUM1-222	ENST00000531867	CASKIN1	Q8WXD9	1431 aa		9.25	□□□□□ -0.93
PUM1-222	ENST00000531867	ADH1A	P07327	375 aa		9.25	□□□□□ -0.93
PUM1-222	ENST00000531867	UBTF	P17480	764 aa	Known RBP	9.25	□□□□□ -0.93
PUM1-222	ENST00000531867	DHX29	Q7Z478	1369 aa	Known RBP	9.24	□□□□□ -0.93
PUM1-222	ENST00000531867	SPINT1	O43278	529 aa		9.24	□□□□□ -0.93
PUM1-222	ENST00000531867	MAN1A2	O60476	641 aa		9.24	□□□□□ -0.93
PUM1-222	ENST00000531867	LILRA1	O75019	489 aa		9.24	□□□□□ -0.93
PUM1-222	ENST00000531867	ZNF777	Q9ULD5	760 aa	Predicted RBP	9.24	□□□□□ -0.93
PUM1-222	ENST00000531867	KDM5D	Q9BY66	1539 aa		9.24	□□□□□ -0.93
PUM1-222	ENST00000531867	VAC14	Q08AM6	782 aa		9.23	□□□□□ -0.93
PUM1-222	ENST00000531867	CYLD	Q9NQC7	956 aa		9.23	□□□□□ -0.93
PUM1-222	ENST00000531867	CEP126	Q9P2H0	1117 aa		9.23	□□□□□ -0.93
PUM1-222	ENST00000531867	SOS2	Q07890	1332 aa	Predicted RBP	9.23	□□□□□ -0.93
PUM1-222	ENST00000531867	MBD5	Q9P267	1494 aa		9.22	□□□□□ -0.93
PUM1-222	ENST00000531867	ERVK-9	P63128	1117 aa		9.22	□□□□□ -0.93
PUM1-222	ENST00000531867	CC2D2B	Q6DHV5	1058 aa		9.22	□□□□□ -0.93
PUM1-222	ENST00000531867	NPAS3	Q8IXF0	933 aa		9.22	□□□□□ -0.93
PUM1-222	ENST00000531867	PCDHB11	Q9Y5F2	797 aa		9.22	□□□□□ -0.93
PUM1-222	ENST00000531867	TTLL8	A6PVC2	850 aa		9.21	□□□□□ -0.94
PUM1-222	ENST00000531867	RELB	Q01201	579 aa		9.21	□□□□□ -0.94
PUM1-222	ENST00000531867	SLFNL1	Q499Z3	407 aa		9.21	□□□□□ -0.94
PUM1-222	ENST00000531867	AGBL1	Q96MI9	1066 aa		9.21	□□□□□ -0.94
PUM1-222	ENST00000531867	SEMA3F	Q13275	785 aa		9.2	□□□□□ -0.94
PUM1-222	ENST00000531867	CYP2U1	Q7Z449	544 aa		9.2	□□□□□ -0.94
PUM1-222	ENST00000531867	NXF1	Q9UBU9	619 aa	Known RBP	9.2	□□□□□ -0.94
PUM1-222	ENST00000531867	CFDP1	Q9UEE9	299 aa	Predicted RBP	9.2	□□□□□ -0.94
PUM1-222	ENST00000531867	ATP5J2-PTCD1	G3V325	749 aa		9.19	□□□□□ -0.94
PUM1-222	ENST00000531867	TERT	O14746	1132 aa	Known RBP	9.19	□□□□□ -0.94
PUM1-222	ENST00000531867	MYC	P01106	439 aa	Predicted RBP	9.19	□□□□□ -0.94
PUM1-222	ENST00000531867	ADD1	P35611	737 aa	Known RBP	9.19	□□□□□ -0.94
PUM1-222	ENST00000531867	PTGIR	P43119	386 aa		9.19	□□□□□ -0.94
PUM1-222	ENST00000531867	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	9.19	□□□□□ -0.94	4e-6	■□□□□ 11.3
PUM1-222	ENST00000531867	TREML4	Q6UXN2	200 aa		9.19	□□□□□ -0.94
PUM1-222	ENST00000531867	PODXL2	Q9NZ53	605 aa		9.19	□□□□□ -0.94
PUM1-222	ENST00000531867	WASHC2C	Q9Y4E1	1318 aa		9.19	□□□□□ -0.94
PUM1-222	ENST00000531867	ARHGAP23	Q9P227	1491 aa		9.19	□□□□□ -0.94
PUM1-222	ENST00000531867	ROBO1	Q9Y6N7	1651 aa		9.19	□□□□□ -0.94
PUM1-222	ENST00000531867	KIF3B	O15066	747 aa		9.18	□□□□□ -0.94
PUM1-222	ENST00000531867	WFS1	O76024	890 aa		9.18	□□□□□ -0.94
PUM1-222	ENST00000531867	RNF135	Q8IUD6	432 aa		9.18	□□□□□ -0.94
PUM1-222	ENST00000531867	UBR1	Q8IWV7	1749 aa		9.18	□□□□□ -0.94
PUM1-222	ENST00000531867	SLC16A10	Q8TF71	515 aa		9.18	□□□□□ -0.94
PUM1-222	ENST00000531867	POM121	Q96HA1	1249 aa		9.18	□□□□□ -0.94
PUM1-222	ENST00000531867	POLM	Q9NP87	494 aa	Predicted RBP	9.18	□□□□□ -0.94
PUM1-222	ENST00000531867	DNMT3L	Q9UJW3	386 aa		9.18	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms