RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 PPARGC1BQ86YN6 1023 aaKnown RBP4.28□□□□□ -1.72
RC3H1-206ENST00000531594 DDRGK1Q96HY6 314 aa4.28□□□□□ -1.72
RC3H1-206ENST00000531594 ZFP64Q9NPA5 681 aa4.28□□□□□ -1.72
RC3H1-206ENST00000531594 PCDHGC4Q9Y5F7 938 aa4.28□□□□□ -1.72
RC3H1-206ENST00000531594 USP3Q9Y6I4 520 aa4.28□□□□□ -1.72
RC3H1-206ENST00000531594 KHNYNO15037 678 aaKnown RBP4.27□□□□□ -1.73
RC3H1-206ENST00000531594 ATXN7O15265 892 aaPredicted RBP4.27□□□□□ -1.73
RC3H1-206ENST00000531594 SPATA31C1P0DKV0 1188 aa4.27□□□□□ -1.73
RC3H1-206ENST00000531594 ADH6P28332 368 aa4.27□□□□□ -1.73
RC3H1-206ENST00000531594 SCNN1DP51172 638 aa4.27□□□□□ -1.73
RC3H1-206ENST00000531594 C8orf86Q6ZUL3 223 aa4.27□□□□□ -1.73
RC3H1-206ENST00000531594 ZNF295-AS1Q8N0V1 137 aa4.27□□□□□ -1.73
RC3H1-206ENST00000531594 PIK3R2O00459 728 aa4.26□□□□□ -1.73
RC3H1-206ENST00000531594 TBC1D9Q6ZT07 1266 aa4.26□□□□□ -1.73
RC3H1-206ENST00000531594 CCDC125Q86Z20 511 aa4.26□□□□□ -1.73
RC3H1-206ENST00000531594 MDFIQ99750 246 aa4.26□□□□□ -1.73
RC3H1-206ENST00000531594 ESF1Q9H501 851 aaKnown RBP4.26□□□□□ -1.73
RC3H1-206ENST00000531594 A0A1W2PNR3 127 aa4.25□□□□□ -1.73
RC3H1-206ENST00000531594 MYCP01106 439 aaPredicted RBP4.25□□□□□ -1.73
RC3H1-206ENST00000531594 GRIK4Q16099 956 aa4.25□□□□□ -1.73
RC3H1-206ENST00000531594 ZNF468Q5VIY5 522 aaPredicted RBP4.25□□□□□ -1.73
RC3H1-206ENST00000531594 TRIM52Q96A61 297 aa4.25□□□□□ -1.73
RC3H1-206ENST00000531594 AIDAQ96BJ3 306 aa4.25□□□□□ -1.73
RC3H1-206ENST00000531594 CEP126Q9P2H0 1117 aa4.25□□□□□ -1.73
RC3H1-206ENST00000531594 GTF2E1P29083 439 aaPredicted RBP4.24□□□□□ -1.73
RC3H1-206ENST00000531594 FAM182BQ5T319 152 aa4.24□□□□□ -1.73
RC3H1-206ENST00000531594 FIGNL1Q6PIW4 674 aa4.24□□□□□ -1.73
RC3H1-206ENST00000531594 MTMR14Q8NCE2 650 aa4.24□□□□□ -1.73
RC3H1-206ENST00000531594 STARD13Q9Y3M8 1113 aa4.24□□□□□ -1.73
RC3H1-206ENST00000531594 ALBP02768 609 aa4.23□□□□□ -1.73
RC3H1-206ENST00000531594 TMEM259Q4ZIN3 620 aa4.23□□□□□ -1.73
RC3H1-206ENST00000531594 OXLD1Q5BKU9 147 aa4.23□□□□□ -1.73
RC3H1-206ENST00000531594 ESCO1Q5FWF5 840 aa4.23□□□□□ -1.73
RC3H1-206ENST00000531594 ARSJQ5FYB0 599 aaPredicted RBP4.23□□□□□ -1.73
RC3H1-206ENST00000531594 NLRP8Q86W28 1048 aa4.23□□□□□ -1.73
RC3H1-206ENST00000531594 PHTF2Q8N3S3 785 aa4.23□□□□□ -1.73
RC3H1-206ENST00000531594 ZIC5Q96T25 663 aa4.23□□□□□ -1.73
RC3H1-206ENST00000531594 PARP3Q9Y6F1 533 aa4.23□□□□□ -1.73
RC3H1-206ENST00000531594 ELOA3CA0A087WX78 387 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-206ENST00000531594 ELOA3DA6NLF2 546 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-206ENST00000531594 M0R082 166 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 EFSO43281 561 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 HYAL3O43820 417 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-206ENST00000531594 FAM157BP0CG42 384 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 GDF10P55107 478 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 ELOA3BQ3SY89 546 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 RAB44Q7Z6P3 723 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-206ENST00000531594 SYT9Q86SS6 491 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 NBPF11Q86T75 865 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 ELOA3Q8NG57 546 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 ZNF417Q8TAU3 575 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 ZNF587Q96SQ5 575 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-206ENST00000531594 AVENQ9NQS1 362 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-206ENST00000531594 SERTAD1Q9UHV2 236 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 PRR12Q9ULL5 1215 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 IQSEC3Q9UPP2 1182 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-206ENST00000531594 DOLKQ9UPQ8 538 aa4.22□□□□□ -1.73
RC3H1-206ENST00000531594 INHAP05111 366 aa4.21□□□□□ -1.74
RC3H1-206ENST00000531594 NID1P14543 1247 aa4.21□□□□□ -1.74
RC3H1-206ENST00000531594 TXLNAP40222 546 aa4.21□□□□□ -1.74
RC3H1-206ENST00000531594 MCCD1P59942 119 aaPredicted RBP4.21□□□□□ -1.74
RC3H1-206ENST00000531594 SLC30A3Q99726 388 aa4.21□□□□□ -1.74
RC3H1-206ENST00000531594 NIFKQ9BYG3 293 aaKnown RBP4.21□□□□□ -1.74
RC3H1-206ENST00000531594 SNRKQ9NRH2 765 aa4.21□□□□□ -1.74
RC3H1-206ENST00000531594 BTBD11A6QL63 1104 aa4.2□□□□□ -1.74
RC3H1-206ENST00000531594 TMEM229AB2RXF0 380 aa4.2□□□□□ -1.74
RC3H1-206ENST00000531594 APBA3O96018 575 aa4.2□□□□□ -1.74
RC3H1-206ENST00000531594 SELPP16109 830 aa4.2□□□□□ -1.74
RC3H1-206ENST00000531594 SMTNP53814 917 aa4.2□□□□□ -1.74
RC3H1-206ENST00000531594 LRP8Q14114 963 aa4.2□□□□□ -1.74
RC3H1-206ENST00000531594 PRRT3Q5FWE3 981 aa4.2□□□□□ -1.74
RC3H1-206ENST00000531594 SHISA2Q6UWI4 295 aa4.2□□□□□ -1.74
RC3H1-206ENST00000531594 C1orf216Q8TAB5 229 aa4.2□□□□□ -1.74
RC3H1-206ENST00000531594 PCMTD1Q96MG8 357 aaPredicted RBP4.2□□□□□ -1.74
RC3H1-206ENST00000531594 MARK1Q9P0L2 795 aa4.2□□□□□ -1.74
RC3H1-206ENST00000531594 SFSWAPQ12872 951 aaKnown RBP4.19□□□□□ -1.74
RC3H1-206ENST00000531594 MBTPS1Q14703 1052 aa4.19□□□□□ -1.74
RC3H1-206ENST00000531594 MICALL1Q8N3F8 863 aa4.19□□□□□ -1.74
RC3H1-206ENST00000531594 ZDHHC1Q8WTX9 485 aa4.19□□□□□ -1.74
RC3H1-206ENST00000531594 GOLGA2P5Q9HBQ8 144 aa4.19□□□□□ -1.74
RC3H1-206ENST00000531594 ZNF330Q9Y3S2 320 aaPredicted RBP4.19□□□□□ -1.74
RC3H1-206ENST00000531594 NDUFB9Q9Y6M9 179 aa4.19□□□□□ -1.74
RC3H1-206ENST00000531594 USP4Q13107 963 aa4.18□□□□□ -1.74
RC3H1-206ENST00000531594 ADGRE1Q14246 886 aa4.18□□□□□ -1.74
RC3H1-206ENST00000531594 SH3PXD2AQ5TCZ1 1133 aa4.18□□□□□ -1.74
RC3H1-206ENST00000531594 LRRC69Q6ZNQ3 347 aa4.18□□□□□ -1.74
RC3H1-206ENST00000531594 C20orf204Q6ZNR8 217 aa4.18□□□□□ -1.74
RC3H1-206ENST00000531594 CHIC2Q9UKJ5 165 aa4.18□□□□□ -1.74
RC3H1-206ENST00000531594 TBC1D2BQ9UPU7 963 aa4.18□□□□□ -1.74
RC3H1-206ENST00000531594 A6NJY4 79 aa4.17□□□□□ -1.74
RC3H1-206ENST00000531594 ADARB2-AS1A8MUL3 147 aa4.17□□□□□ -1.74
RC3H1-206ENST00000531594 ADH7P40394 386 aa4.17□□□□□ -1.74
RC3H1-206ENST00000531594 NRG1Q02297 640 aaPredicted RBP4.17□□□□□ -1.74
RC3H1-206ENST00000531594 TRIM28Q13263 835 aaKnown RBP4.17□□□□□ -1.74
RC3H1-206ENST00000531594 IRF5Q13568 498 aa4.17□□□□□ -1.74
RC3H1-206ENST00000531594 MTFR1Q15390 333 aa4.17□□□□□ -1.74
RC3H1-206ENST00000531594 NBPF1Q3BBV0 1214 aa4.17□□□□□ -1.74
RC3H1-206ENST00000531594 SAMD5Q5TGI4 173 aa4.17□□□□□ -1.74
RC3H1-206ENST00000531594 BICDL1Q6ZP65 573 aa4.17□□□□□ -1.74
RC3H1-206ENST00000531594 ZDHHC3Q9NYG2 299 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms