RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 KIAA1024Q9UPX6 916 aa6.32□□□□□ -1.4
ECHDC1-221ENST00000531582 A6NJY4 79 aa6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 CDK2AP1O14519 115 aa6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 IL2RAP01589 272 aa6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 HSP90AA1P07900 732 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 CENPCQ03188 943 aa6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 MTFR1Q15390 333 aa6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 SLC27A3Q5K4L6 730 aa6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 TRIM44Q96DX7 344 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 ZSCAN10Q96SZ4 725 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 HINFPQ9BQA5 517 aa6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 ZNF395Q9H8N7 513 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 POLMQ9NP87 494 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 ATP13A2Q9NQ11 1180 aa6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 CHMP3Q9Y3E7 222 aa6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 HRH3Q9Y5N1 445 aa6.31□□□□□ -1.4
ECHDC1-221ENST00000531582 LCE2BO14633 110 aa6.3□□□□□ -1.4
ECHDC1-221ENST00000531582 TLR1Q15399 786 aa6.3□□□□□ -1.4
ECHDC1-221ENST00000531582 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
ECHDC1-221ENST00000531582 GNASQ5JWF2 1037 aa6.3□□□□□ -1.4
ECHDC1-221ENST00000531582 C6orf118Q5T5N4 469 aa6.3□□□□□ -1.4
ECHDC1-221ENST00000531582 PURBQ96QR8 312 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-221ENST00000531582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.3□□□□□ -1.4
ECHDC1-221ENST00000531582 RAB6BQ9NRW1 208 aa6.3□□□□□ -1.4
ECHDC1-221ENST00000531582 ZMIZ1Q9ULJ6 1067 aa6.3□□□□□ -1.4
ECHDC1-221ENST00000531582 TTLL8A6PVC2 850 aa6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 SFI1A8K8P3 1242 aa6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 TMEM164Q5U3C3 297 aa6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 TMEM214Q6NUQ4 689 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 TRIM46Q7Z4K8 759 aa6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 CLP1Q92989 425 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 ZFP42Q96MM3 310 aa6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 INSM2Q96T92 566 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 GRIP2Q9C0E4 1043 aa6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 PDCL3Q9H2J4 239 aa6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 SERTAD1Q9UHV2 236 aa6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 NOP58Q9Y2X3 529 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-221ENST00000531582 SOS2Q07890 1332 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 SPATA31C2B4DYI2 1134 aa6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 PATL2C9JE40 543 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 ST8SIA5O15466 376 aa6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 BMP1P13497 986 aa6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 FAM193AP78312 1265 aa6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 TAF3Q5VWG9 929 aa6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 LYSMD3Q7Z3D4 306 aa6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 STAG2Q8N3U4 1231 aa6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 CEP120Q8N960 986 aa6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 RETREG2Q8NC44 543 aa6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 RHBDD1Q8TEB9 315 aa6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 STK32AQ8WU08 396 aa6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 NIFKQ9BYG3 293 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 FHDC1Q9C0D6 1143 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 SCHIP1Q9P0W5 487 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-221ENST00000531582 FOXO3O43524 673 aa6.27□□□□□ -1.41
ECHDC1-221ENST00000531582 IGFBP4P22692 258 aa6.27□□□□□ -1.41
ECHDC1-221ENST00000531582 CTSOP43234 321 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-221ENST00000531582 IRX6P78412 446 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-221ENST00000531582 RGS22Q8NE09 1264 aa6.27□□□□□ -1.41
ECHDC1-221ENST00000531582 DNAJC2Q99543 621 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-221ENST00000531582 TRAIPQ9BWF2 469 aa6.27□□□□□ -1.41
ECHDC1-221ENST00000531582 TMEM88BA6NKF7 163 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 MAFGO15525 162 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 MAN1A2O60476 641 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 EPHA4P54764 986 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 PSMA6P60900 246 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 FOXK2Q01167 660 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 FAM69CQ0P6D2 419 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 FOXD4L5Q5VV16 416 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 TAS1R3Q7RTX0 852 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 TNS4Q8IZW8 715 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 TSEN2Q8NCE0 465 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 RNF217Q8TC41 542 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 TRIM47Q96LD4 638 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 MAP7D2Q96T17 732 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 BRPF3Q9ULD4 1205 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 MTMR7Q9Y216 660 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 ATAD2Q6PL18 1390 aa6.26□□□□□ -1.41
ECHDC1-221ENST00000531582 WEE1P30291 646 aa6.25□□□□□ -1.41
ECHDC1-221ENST00000531582 TEAD4Q15561 434 aa6.25□□□□□ -1.41
ECHDC1-221ENST00000531582 UTP14CQ5TAP6 766 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-221ENST00000531582 SLC9A9Q8IVB4 645 aa6.25□□□□□ -1.41
ECHDC1-221ENST00000531582 SMAP1Q8IYB5 467 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-221ENST00000531582 C1orf216Q8TAB5 229 aa6.25□□□□□ -1.41
ECHDC1-221ENST00000531582 VTI1AQ96AJ9 217 aa6.25□□□□□ -1.41
ECHDC1-221ENST00000531582 LAS1LQ9Y4W2 734 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-221ENST00000531582 PPP1R12BO60237 982 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-221ENST00000531582 PTCD1O75127 700 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-221ENST00000531582 BRD1O95696 1058 aa6.24□□□□□ -1.41
ECHDC1-221ENST00000531582 IRX3P78415 501 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-221ENST00000531582 SCG3Q8WXD2 468 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-221ENST00000531582 COL26A1Q96A83 441 aa6.24□□□□□ -1.41
ECHDC1-221ENST00000531582 CABP1Q9NZU7 370 aa6.24□□□□□ -1.41
ECHDC1-221ENST00000531582 IQSEC3Q9UPP2 1182 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-221ENST00000531582 GPC6Q9Y625 555 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-221ENST00000531582 SERTM1A2A2V5 107 aa6.23□□□□□ -1.41
ECHDC1-221ENST00000531582 STAU1O95793 577 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-221ENST00000531582 ATP2B4P23634 1241 aa6.23□□□□□ -1.41
ECHDC1-221ENST00000531582 HIRAP54198 1017 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms