RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 CYP19A1P11511 503 aaPredicted RBP22.66■■□□□ 1.22
CTSB-222ENST00000531551 RARSP54136 660 aaKnown RBP22.66■■□□□ 1.22
CTSB-222ENST00000531551 LINC00116Q8NCU8 138 aa22.66■■□□□ 1.22
CTSB-222ENST00000531551 SSH1Q8WYL5 1049 aa22.66■■□□□ 1.22
CTSB-222ENST00000531551 SMC4Q9NTJ3 1288 aa22.66■■□□□ 1.22
CTSB-222ENST00000531551 CHPF2Q9P2E5 772 aa22.66■■□□□ 1.22
CTSB-222ENST00000531551 ANXA1P04083 346 aa22.65■■□□□ 1.22
CTSB-222ENST00000531551 UPF1Q92900 1129 aaKnown RBP eCLIP22.65■■□□□ 1.225e-29■■■■■ 114
CTSB-222ENST00000531551 ZNF428Q96B54 188 aa22.65■■□□□ 1.22
CTSB-222ENST00000531551 C5P01031 1676 aa22.65■■□□□ 1.22
CTSB-222ENST00000531551 MYL6BP14649 208 aa22.64■■□□□ 1.22
CTSB-222ENST00000531551 SLC4A2P04920 1241 aa22.64■■□□□ 1.21
CTSB-222ENST00000531551 CANXP27824 592 aaKnown RBP22.64■■□□□ 1.21
CTSB-222ENST00000531551 ZNF330Q9Y3S2 320 aaPredicted RBP22.64■■□□□ 1.21
CTSB-222ENST00000531551 BCAR3O75815 825 aa22.63■■□□□ 1.21
CTSB-222ENST00000531551 CRKLP46109 303 aaKnown RBP22.63■■□□□ 1.21
CTSB-222ENST00000531551 CAMKK2Q96RR4 588 aa22.63■■□□□ 1.21
CTSB-222ENST00000531551 DBF4Q9UBU7 674 aaPredicted RBP22.63■■□□□ 1.21
CTSB-222ENST00000531551 ALDH1L2Q3SY69 923 aa22.62■■□□□ 1.21
CTSB-222ENST00000531551 LY75O60449 1722 aa22.62■■□□□ 1.21
CTSB-222ENST00000531551 ZBTB1Q9Y2K1 713 aa22.62■■□□□ 1.21
CTSB-222ENST00000531551 PROSER3Q2NL68 480 aa22.61■■□□□ 1.21
CTSB-222ENST00000531551 CCDC87Q9NVE4 849 aa22.61■■□□□ 1.21
CTSB-222ENST00000531551 TJP1Q07157 1748 aa22.61■■□□□ 1.21
CTSB-222ENST00000531551 DDX21Q9NR30 783 aaKnown RBP eCLIP22.6■■□□□ 1.21
CTSB-222ENST00000531551 NBPF26B4DH59 902 aa22.6■■□□□ 1.21
CTSB-222ENST00000531551 PDIA6Q15084 440 aa22.6■■□□□ 1.21
CTSB-222ENST00000531551 NBPF14Q5TI25 921 aa22.6■■□□□ 1.21
CTSB-222ENST00000531551 NBPF10Q6P3W6 841 aaKnown RBP22.6■■□□□ 1.21
CTSB-222ENST00000531551 INTS5Q6P9B9 1019 aaKnown RBP22.6■■□□□ 1.21
CTSB-222ENST00000531551 MRPL50Q8N5N7 158 aaKnown RBP22.6■■□□□ 1.21
CTSB-222ENST00000531551 NBPF15Q8N660 670 aa22.6■■□□□ 1.21
CTSB-222ENST00000531551 FRAT1Q92837 279 aaPredicted RBP22.59■■□□□ 1.21
CTSB-222ENST00000531551 AK7Q96M32 723 aa22.59■■□□□ 1.21
CTSB-222ENST00000531551 NPM2Q86SE8 214 aaKnown RBP22.58■■□□□ 1.21
CTSB-222ENST00000531551 ARXQ96QS3 562 aa22.58■■□□□ 1.21
CTSB-222ENST00000531551 ERBB4Q15303 1308 aa22.58■■□□□ 1.21
CTSB-222ENST00000531551 AIMP1Q12904 312 aaKnown RBP22.58■■□□□ 1.2
CTSB-222ENST00000531551 PHAXQ9H814 394 aaKnown RBP22.58■■□□□ 1.2
CTSB-222ENST00000531551 LAMB4A4D0S4 1761 aa22.57■■□□□ 1.2
CTSB-222ENST00000531551 GNPATO15228 680 aa22.57■■□□□ 1.2
CTSB-222ENST00000531551 G2E3Q7L622 706 aa22.57■■□□□ 1.2
CTSB-222ENST00000531551 HYPKQ9NX55 129 aa22.57■■□□□ 1.2
CTSB-222ENST00000531551 CNTNAP4Q9C0A0 1308 aa22.57■■□□□ 1.2
CTSB-222ENST00000531551 HMGB2P26583 209 aaKnown RBP22.56■■□□□ 1.2
CTSB-222ENST00000531551 RC3H1Q5TC82 1133 aaKnown RBP22.56■■□□□ 1.2
CTSB-222ENST00000531551 NOB1Q9ULX3 412 aaKnown RBP22.56■■□□□ 1.2
CTSB-222ENST00000531551 ZNF831Q5JPB2 1677 aa22.55■■□□□ 1.2
CTSB-222ENST00000531551 SMIM5Q71RC9 77 aa22.55■■□□□ 1.2
CTSB-222ENST00000531551 IL6STP40189 918 aaPredicted RBP22.54■■□□□ 1.2
CTSB-222ENST00000531551 COPS6Q7L5N1 327 aa22.54■■□□□ 1.2
CTSB-222ENST00000531551 XAGE3Q8WTP9 111 aa22.54■■□□□ 1.2
CTSB-222ENST00000531551 SUPT16HQ9Y5B9 1047 aaKnown RBP22.54■■□□□ 1.2
CTSB-222ENST00000531551 PHF14O94880 888 aa22.54■■□□□ 1.2
CTSB-222ENST00000531551 FLIIQ13045 1269 aa22.54■■□□□ 1.2
CTSB-222ENST00000531551 RTCBQ9Y3I0 505 aaKnown RBP22.54■■□□□ 1.2
CTSB-222ENST00000531551 CICQ96RK0 1608 aaPredicted RBP22.53■■□□□ 1.2
CTSB-222ENST00000531551 KIF16BQ96L93 1317 aa22.53■■□□□ 1.2
CTSB-222ENST00000531551 FKBP5Q13451 457 aaPredicted RBP22.53■■□□□ 1.2
CTSB-222ENST00000531551 PLIN1O60240 522 aa22.52■■□□□ 1.2
CTSB-222ENST00000531551 RPS6KA4O75676 772 aa22.52■■□□□ 1.2
CTSB-222ENST00000531551 LRP10Q7Z4F1 713 aa22.52■■□□□ 1.2
CTSB-222ENST00000531551 TFCP2L1Q9NZI6 479 aa22.52■■□□□ 1.2
CTSB-222ENST00000531551 RGPD3A6NKT7 1758 aaPredicted RBP22.52■■□□□ 1.2
CTSB-222ENST00000531551 RGPD4Q7Z3J3 1758 aa22.52■■□□□ 1.2
CTSB-222ENST00000531551 COL5A3P25940 1745 aaPredicted RBP22.52■■□□□ 1.2
CTSB-222ENST00000531551 EIF5P55010 431 aaKnown RBP22.51■■□□□ 1.19
CTSB-222ENST00000531551 ZNF827Q17R98 1081 aa22.51■■□□□ 1.19
CTSB-222ENST00000531551 C4BP0C0L5 1744 aa22.51■■□□□ 1.19
CTSB-222ENST00000531551 TTLL7Q6ZT98 887 aa22.51■■□□□ 1.19
CTSB-222ENST00000531551 BRPF1P55201 1214 aaPredicted RBP22.5■■□□□ 1.19
CTSB-222ENST00000531551 AMIGO3Q86WK7 504 aa22.5■■□□□ 1.19
CTSB-222ENST00000531551 TBC1D2BQ9UPU7 963 aa22.5■■□□□ 1.19
CTSB-222ENST00000531551 IPO8O15397 1037 aaKnown RBP22.49■■□□□ 1.19
CTSB-222ENST00000531551 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.49■■□□□ 1.19
CTSB-222ENST00000531551 AKT1S1Q96B36 256 aa22.49■■□□□ 1.19
CTSB-222ENST00000531551 STK32BQ9NY57 414 aa22.49■■□□□ 1.19
CTSB-222ENST00000531551 TAF1LQ8IZX4 1826 aa22.49■■□□□ 1.19
CTSB-222ENST00000531551 DDX58O95786 925 aaKnown RBP22.49■■□□□ 1.19
CTSB-222ENST00000531551 ZKSCAN2Q63HK3 967 aa22.49■■□□□ 1.19
CTSB-222ENST00000531551 KIF6Q6ZMV9 814 aa22.49■■□□□ 1.19
CTSB-222ENST00000531551 ANO8Q9HCE9 1232 aaPredicted RBP22.49■■□□□ 1.19
CTSB-222ENST00000531551 COL15A1P39059 1388 aa22.49■■□□□ 1.19
CTSB-222ENST00000531551 PTPRCP08575 1304 aa22.48■■□□□ 1.19
CTSB-222ENST00000531551 TRAPPC3LQ5T215 181 aa22.48■■□□□ 1.19
CTSB-222ENST00000531551 RIC3Q7Z5B4 369 aa22.48■■□□□ 1.19
CTSB-222ENST00000531551 DZIP3Q86Y13 1208 aaKnown RBP22.48■■□□□ 1.19
CTSB-222ENST00000531551 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.47■■□□□ 1.19
CTSB-222ENST00000531551 RRP1P56182 461 aaKnown RBP22.47■■□□□ 1.19
CTSB-222ENST00000531551 CLUAP1Q96AJ1 413 aa22.47■■□□□ 1.19
CTSB-222ENST00000531551 ZBTB3Q9H5J0 574 aa22.47■■□□□ 1.19
CTSB-222ENST00000531551 MYH14Q7Z406 1995 aaKnown RBP22.47■■□□□ 1.19
CTSB-222ENST00000531551 PI4KAP2A4QPH2 592 aa22.47■■□□□ 1.19
CTSB-222ENST00000531551 ANKRD13DQ6ZTN6 518 aa22.47■■□□□ 1.19
CTSB-222ENST00000531551 PI4KAP1Q8N8J0 262 aa22.47■■□□□ 1.19
CTSB-222ENST00000531551 A0A087WZG4 1122 aa22.46■■□□□ 1.19
CTSB-222ENST00000531551 F6X3S4 739 aa22.46■■□□□ 1.19
CTSB-222ENST00000531551 SLC15A2Q16348 729 aa22.46■■□□□ 1.19
CTSB-222ENST00000531551 ATF7IPQ6VMQ6 1270 aa22.46■■□□□ 1.19
CTSB-222ENST00000531551 ARHGEF1Q92888 912 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms