RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 PIM2Q9P1W9 311 aa17.88■□□□□ 0.45
AMBRA1-210ENST00000531542 NUDCQ9Y266 331 aa17.88■□□□□ 0.45
AMBRA1-210ENST00000531542 ZBTB1Q9Y2K1 713 aa17.88■□□□□ 0.45
AMBRA1-210ENST00000531542 COL15A1P39059 1388 aa17.88■□□□□ 0.45
AMBRA1-210ENST00000531542 EIF5P55010 431 aaKnown RBP17.87■□□□□ 0.45
AMBRA1-210ENST00000531542 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
AMBRA1-210ENST00000531542 FCHSD2O94868 740 aa17.86■□□□□ 0.45
AMBRA1-210ENST00000531542 PPP2R1AP30153 589 aa17.86■□□□□ 0.45
AMBRA1-210ENST00000531542 ZNF496Q96IT1 587 aaPredicted RBP17.86■□□□□ 0.45
AMBRA1-210ENST00000531542 PHACTR3Q96KR7 559 aa17.86■□□□□ 0.45
AMBRA1-210ENST00000531542 UBR2Q8IWV8 1755 aa17.86■□□□□ 0.45
AMBRA1-210ENST00000531542 A0A087WZG4 1122 aa17.85■□□□□ 0.45
AMBRA1-210ENST00000531542 PRKAR2BP31323 418 aa17.85■□□□□ 0.45
AMBRA1-210ENST00000531542 NFIXQ14938 502 aa17.85■□□□□ 0.45
AMBRA1-210ENST00000531542 BCL2L12Q9HB09 334 aa17.85■□□□□ 0.45
AMBRA1-210ENST00000531542 HEG1Q9ULI3 1381 aa17.85■□□□□ 0.45
AMBRA1-210ENST00000531542 DALRD3Q5D0E6 543 aaKnown RBP17.84■□□□□ 0.45
AMBRA1-210ENST00000531542 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.44
AMBRA1-210ENST00000531542 ARHGAP27Q6ZUM4 889 aa17.83■□□□□ 0.44
AMBRA1-210ENST00000531542 FMNL2Q96PY5 1086 aa17.83■□□□□ 0.44
AMBRA1-210ENST00000531542 N4BP2Q86UW6 1770 aaPredicted RBP17.82■□□□□ 0.44
AMBRA1-210ENST00000531542 HTATSF1O43719 755 aaKnown RBP17.82■□□□□ 0.44
AMBRA1-210ENST00000531542 CANXP27824 592 aaKnown RBP17.82■□□□□ 0.44
AMBRA1-210ENST00000531542 IL6STP40189 918 aaPredicted RBP17.82■□□□□ 0.44
AMBRA1-210ENST00000531542 U2AF1L5P0DN76 240 aaPredicted RBP17.81■□□□□ 0.44
AMBRA1-210ENST00000531542 U2AF1Q01081 240 aaKnown RBP eCLIP17.81■□□□□ 0.44
AMBRA1-210ENST00000531542 BRCA1P38398 1863 aaKnown RBP17.81■□□□□ 0.44
AMBRA1-210ENST00000531542 VIRMAQ69YN4 1812 aaKnown RBP17.8■□□□□ 0.44
AMBRA1-210ENST00000531542 BTBD11A6QL63 1104 aa17.8■□□□□ 0.44
AMBRA1-210ENST00000531542 KIF3CO14782 793 aa17.8■□□□□ 0.44
AMBRA1-210ENST00000531542 SERPINB2P05120 415 aa17.8■□□□□ 0.44
AMBRA1-210ENST00000531542 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
AMBRA1-210ENST00000531542 NRXN2Q9P2S2 1712 aa17.79■□□□□ 0.44
AMBRA1-210ENST00000531542 CHRNA5P30532 468 aa17.79■□□□□ 0.44
AMBRA1-210ENST00000531542 ZNF526Q8TF50 670 aaPredicted RBP17.79■□□□□ 0.44
AMBRA1-210ENST00000531542 RTF1Q92541 710 aaKnown RBP17.79■□□□□ 0.44
AMBRA1-210ENST00000531542 PDZRN3Q9UPQ7 1066 aa17.79■□□□□ 0.44
AMBRA1-210ENST00000531542 ARFGEF1Q9Y6D6 1849 aa17.77■□□□□ 0.44
AMBRA1-210ENST00000531542 RGL2O15211 777 aa17.76■□□□□ 0.43
AMBRA1-210ENST00000531542 HSPA6P17066 643 aa17.76■□□□□ 0.43
AMBRA1-210ENST00000531542 C9orf131Q5VYM1 1079 aa17.76■□□□□ 0.43
AMBRA1-210ENST00000531542 KCNQ3O43525 872 aa17.75■□□□□ 0.43
AMBRA1-210ENST00000531542 A1BGP04217 495 aa17.75■□□□□ 0.43
AMBRA1-210ENST00000531542 SNRPA1P09661 255 aaKnown RBP17.75■□□□□ 0.43
AMBRA1-210ENST00000531542 CEP350Q5VT06 3117 aa17.75■□□□□ 0.43
AMBRA1-210ENST00000531542 ZC3H4Q9UPT8 1303 aaKnown RBP17.74■□□□□ 0.43
AMBRA1-210ENST00000531542 H0YIN7 160 aa17.74■□□□□ 0.43
AMBRA1-210ENST00000531542 TOMM70O94826 608 aa17.74■□□□□ 0.43
AMBRA1-210ENST00000531542 TBC1D9BQ66K14 1250 aa17.74■□□□□ 0.43
AMBRA1-210ENST00000531542 MCM10Q7L590 875 aa17.74■□□□□ 0.43
AMBRA1-210ENST00000531542 NPM2Q86SE8 214 aaKnown RBP17.74■□□□□ 0.43
AMBRA1-210ENST00000531542 TTLL6Q8N841 843 aa17.74■□□□□ 0.43
AMBRA1-210ENST00000531542 BRIP1Q9BX63 1249 aa17.74■□□□□ 0.43
AMBRA1-210ENST00000531542 USP16Q9Y5T5 823 aa17.74■□□□□ 0.43
AMBRA1-210ENST00000531542 CAMTA2O94983 1202 aa17.73■□□□□ 0.43
AMBRA1-210ENST00000531542 TAF7Q15545 349 aaPredicted RBP17.73■□□□□ 0.43
AMBRA1-210ENST00000531542 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
AMBRA1-210ENST00000531542 TBC1D2BQ9UPU7 963 aa17.73■□□□□ 0.43
AMBRA1-210ENST00000531542 CARMIL3Q8ND23 1372 aa17.73■□□□□ 0.43
AMBRA1-210ENST00000531542 PDE6BP35913 854 aa17.72■□□□□ 0.43
AMBRA1-210ENST00000531542 C2CD5Q86YS7 1000 aa17.72■□□□□ 0.43
AMBRA1-210ENST00000531542 AFDNP55196 1824 aaKnown RBP17.71■□□□□ 0.43
AMBRA1-210ENST00000531542 BICDL1Q6ZP65 573 aa17.71■□□□□ 0.43
AMBRA1-210ENST00000531542 PLEKHF1Q96S99 279 aa17.71■□□□□ 0.43
AMBRA1-210ENST00000531542 SETDB2Q96T68 719 aa17.71■□□□□ 0.43
AMBRA1-210ENST00000531542 RNF181Q9P0P0 153 aa17.71■□□□□ 0.43
AMBRA1-210ENST00000531542 KDM2BQ8NHM5 1336 aa17.71■□□□□ 0.42
AMBRA1-210ENST00000531542 NEFMP07197 916 aa17.7■□□□□ 0.42
AMBRA1-210ENST00000531542 PRR5LQ6MZQ0 368 aa17.7■□□□□ 0.42
AMBRA1-210ENST00000531542 DZIP3Q86Y13 1208 aaKnown RBP17.7■□□□□ 0.42
AMBRA1-210ENST00000531542 PNISRQ8TF01 805 aaKnown RBP17.7■□□□□ 0.42
AMBRA1-210ENST00000531542 PNNQ9H307 717 aaKnown RBP17.7■□□□□ 0.42
AMBRA1-210ENST00000531542 SCN7AQ01118 1682 aa17.7■□□□□ 0.42
AMBRA1-210ENST00000531542 LMNB1P20700 586 aa17.69■□□□□ 0.42
AMBRA1-210ENST00000531542 DCTN1Q14203 1278 aa17.69■□□□□ 0.42
AMBRA1-210ENST00000531542 NMRK2Q9NPI5 230 aa17.69■□□□□ 0.42
AMBRA1-210ENST00000531542 ZNF330Q9Y3S2 320 aaPredicted RBP17.69■□□□□ 0.42
AMBRA1-210ENST00000531542 RBM46Q8TBY0 533 aaKnown RBP17.68■□□□□ 0.42
AMBRA1-210ENST00000531542 ZNF652Q9Y2D9 606 aa17.68■□□□□ 0.42
AMBRA1-210ENST00000531542 DLEC1Q9Y238 1755 aa17.68■□□□□ 0.42
AMBRA1-210ENST00000531542 PRAMEF22A3QJZ6 481 aa17.67■□□□□ 0.42
AMBRA1-210ENST00000531542 CNBD1Q8NA66 436 aa17.67■□□□□ 0.42
AMBRA1-210ENST00000531542 NBPF26B4DH59 902 aa17.66■□□□□ 0.42
AMBRA1-210ENST00000531542 APLP1P51693 650 aa17.66■□□□□ 0.42
AMBRA1-210ENST00000531542 NFE2L2Q16236 605 aa17.66■□□□□ 0.42
AMBRA1-210ENST00000531542 STYK1Q6J9G0 422 aa17.66■□□□□ 0.42
AMBRA1-210ENST00000531542 NBPF10Q6P3W6 841 aaKnown RBP17.66■□□□□ 0.42
AMBRA1-210ENST00000531542 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
AMBRA1-210ENST00000531542 NFKBIEO00221 500 aa17.65■□□□□ 0.42
AMBRA1-210ENST00000531542 ST5P78524 1137 aa17.65■□□□□ 0.42
AMBRA1-210ENST00000531542 FSTL1Q12841 308 aa17.65■□□□□ 0.42
AMBRA1-210ENST00000531542 RALBP1Q15311 655 aa17.65■□□□□ 0.42
AMBRA1-210ENST00000531542 KLRG2A4D1S0 409 aaPredicted RBP17.64■□□□□ 0.41
AMBRA1-210ENST00000531542 SRGNP10124 158 aa17.64■□□□□ 0.41
AMBRA1-210ENST00000531542 PRELPP51888 382 aa17.64■□□□□ 0.41
AMBRA1-210ENST00000531542 RASSF7Q02833 373 aa17.64■□□□□ 0.41
AMBRA1-210ENST00000531542 CNKSR1Q969H4 720 aa17.64■□□□□ 0.41
AMBRA1-210ENST00000531542 LTBP3Q9NS15 1303 aa17.64■□□□□ 0.41
AMBRA1-210ENST00000531542 GLTPD2A6NH11 291 aa17.63■□□□□ 0.41
AMBRA1-210ENST00000531542 TPTE2Q6XPS3 522 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms