RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CNGB1Q14028 1251 aaPredicted RBP24.96■■□□□ 1.59
SSSCA1-206ENST00000531405 PIM2Q9P1W9 311 aa24.96■■□□□ 1.59
SSSCA1-206ENST00000531405 ZPR1O75312 459 aa24.95■■□□□ 1.58
SSSCA1-206ENST00000531405 TM4SF1P30408 202 aa24.95■■□□□ 1.58
SSSCA1-206ENST00000531405 CHRNA5P30532 468 aa24.95■■□□□ 1.58
SSSCA1-206ENST00000531405 ZBTB1Q9Y2K1 713 aa24.94■■□□□ 1.58
SSSCA1-206ENST00000531405 CCDC88AQ3V6T2 1871 aa24.94■■□□□ 1.58
SSSCA1-206ENST00000531405 COL15A1P39059 1388 aa24.93■■□□□ 1.58
SSSCA1-206ENST00000531405 DALRD3Q5D0E6 543 aaKnown RBP24.93■■□□□ 1.58
SSSCA1-206ENST00000531405 C9orf131Q5VYM1 1079 aa24.92■■□□□ 1.58
SSSCA1-206ENST00000531405 NMRK2Q9NPI5 230 aa24.92■■□□□ 1.58
SSSCA1-206ENST00000531405 NARFQ9UHQ1 456 aa24.9■■□□□ 1.58
SSSCA1-206ENST00000531405 NFIXQ14938 502 aa24.89■■□□□ 1.58
SSSCA1-206ENST00000531405 ANKRD31Q8N7Z5 1873 aa24.88■■□□□ 1.57
SSSCA1-206ENST00000531405 U2SURPO15042 1029 aaKnown RBP24.88■■□□□ 1.57
SSSCA1-206ENST00000531405 BCL2L12Q9HB09 334 aa24.88■■□□□ 1.57
SSSCA1-206ENST00000531405 CANXP27824 592 aaKnown RBP24.87■■□□□ 1.57
SSSCA1-206ENST00000531405 VSIG10Q8N0Z9 540 aa24.87■■□□□ 1.57
SSSCA1-206ENST00000531405 SCN7AQ01118 1682 aa24.87■■□□□ 1.57
SSSCA1-206ENST00000531405 TNRC6CQ9HCJ0 1690 aaKnown RBP24.86■■□□□ 1.57
SSSCA1-206ENST00000531405 TOMM70O94826 608 aa24.86■■□□□ 1.57
SSSCA1-206ENST00000531405 RNF181Q9P0P0 153 aa24.86■■□□□ 1.57
SSSCA1-206ENST00000531405 NPC1L1Q9UHC9 1359 aa24.85■■□□□ 1.57
SSSCA1-206ENST00000531405 TTC5Q8N0Z6 440 aa24.85■■□□□ 1.57
SSSCA1-206ENST00000531405 WDR90Q96KV7 1748 aa24.85■■□□□ 1.57
SSSCA1-206ENST00000531405 CACNA1SQ13698 1873 aa24.84■■□□□ 1.57
SSSCA1-206ENST00000531405 IL17REQ8NFR9 667 aa24.84■■□□□ 1.57
SSSCA1-206ENST00000531405 TIAM2Q8IVF5 1701 aa24.83■■□□□ 1.57
SSSCA1-206ENST00000531405 CARMIL3Q8ND23 1372 aa24.83■■□□□ 1.57
SSSCA1-206ENST00000531405 SERPINB2P05120 415 aa24.83■■□□□ 1.57
SSSCA1-206ENST00000531405 ZNF496Q96IT1 587 aaPredicted RBP24.83■■□□□ 1.57
SSSCA1-206ENST00000531405 GNAT3A8MTJ3 354 aa24.82■■□□□ 1.56
SSSCA1-206ENST00000531405 COL11A2P13942 1736 aaPredicted RBP24.82■■□□□ 1.56
SSSCA1-206ENST00000531405 TEFQ10587 303 aa24.82■■□□□ 1.56
SSSCA1-206ENST00000531405 STARD3NLO95772 234 aa24.81■■□□□ 1.56
SSSCA1-206ENST00000531405 RASSF7Q02833 373 aa24.81■■□□□ 1.56
SSSCA1-206ENST00000531405 BICDL1Q6ZP65 573 aa24.81■■□□□ 1.56
SSSCA1-206ENST00000531405 GAS2L2Q8NHY3 880 aa24.81■■□□□ 1.56
SSSCA1-206ENST00000531405 HEG1Q9ULI3 1381 aa24.8■■□□□ 1.56
SSSCA1-206ENST00000531405 APLP1P51693 650 aa24.8■■□□□ 1.56
SSSCA1-206ENST00000531405 EIF5P55010 431 aaKnown RBP24.8■■□□□ 1.56
SSSCA1-206ENST00000531405 ZNF790Q6PG37 636 aa24.8■■□□□ 1.56
SSSCA1-206ENST00000531405 BCORQ6W2J9 1755 aa24.8■■□□□ 1.56
SSSCA1-206ENST00000531405 ZNF330Q9Y3S2 320 aaPredicted RBP24.79■■□□□ 1.56
SSSCA1-206ENST00000531405 IFFO2Q5TF58 517 aa24.78■■□□□ 1.56
SSSCA1-206ENST00000531405 KDM2BQ8NHM5 1336 aa24.78■■□□□ 1.56
SSSCA1-206ENST00000531405 C2CD5Q86YS7 1000 aa24.77■■□□□ 1.56
SSSCA1-206ENST00000531405 C16orf71Q8IYS4 520 aaPredicted RBP24.77■■□□□ 1.56
SSSCA1-206ENST00000531405 PHACTR3Q96KR7 559 aa24.77■■□□□ 1.56
SSSCA1-206ENST00000531405 DICER1Q9UPY3 1922 aaKnown RBP24.76■■□□□ 1.55
SSSCA1-206ENST00000531405 TBC1D9BQ66K14 1250 aa24.76■■□□□ 1.55
SSSCA1-206ENST00000531405 RBM46Q8TBY0 533 aaKnown RBP24.76■■□□□ 1.55
SSSCA1-206ENST00000531405 RRAGCQ9HB90 399 aa24.76■■□□□ 1.55
SSSCA1-206ENST00000531405 A0A087WZG4 1122 aa24.75■■□□□ 1.55
SSSCA1-206ENST00000531405 PRKAR2BP31323 418 aa24.75■■□□□ 1.55
SSSCA1-206ENST00000531405 PRELPP51888 382 aa24.75■■□□□ 1.55
SSSCA1-206ENST00000531405 TBC1D2BQ9UPU7 963 aa24.75■■□□□ 1.55
SSSCA1-206ENST00000531405 CEMIPQ8WUJ3 1361 aa24.75■■□□□ 1.55
SSSCA1-206ENST00000531405 FER1L6Q2WGJ9 1857 aa24.75■■□□□ 1.55
SSSCA1-206ENST00000531405 KCNQ3O43525 872 aa24.74■■□□□ 1.55
SSSCA1-206ENST00000531405 TTLL6Q8N841 843 aa24.74■■□□□ 1.55
SSSCA1-206ENST00000531405 RSPH6AQ9H0K4 717 aa24.74■■□□□ 1.55
SSSCA1-206ENST00000531405 H0YIN7 160 aa24.73■■□□□ 1.55
SSSCA1-206ENST00000531405 A1BGP04217 495 aa24.73■■□□□ 1.55
SSSCA1-206ENST00000531405 CCDC24Q8N4L8 307 aa24.73■■□□□ 1.55
SSSCA1-206ENST00000531405 DNAJC5GQ8N7S2 189 aa24.73■■□□□ 1.55
SSSCA1-206ENST00000531405 FMNL2Q96PY5 1086 aa24.73■■□□□ 1.55
SSSCA1-206ENST00000531405 TEX13AQ9BXU3 409 aaPredicted RBP24.73■■□□□ 1.55
SSSCA1-206ENST00000531405 HTRA3P83110 453 aa24.72■■□□□ 1.55
SSSCA1-206ENST00000531405 PCNTO95613 3336 aa24.72■■□□□ 1.55
SSSCA1-206ENST00000531405 SLX4Q8IY92 1834 aa24.71■■□□□ 1.55
SSSCA1-206ENST00000531405 BTBD11A6QL63 1104 aa24.71■■□□□ 1.55
SSSCA1-206ENST00000531405 IL6STP40189 918 aaPredicted RBP24.71■■□□□ 1.55
SSSCA1-206ENST00000531405 CFAP53Q96M91 514 aa24.71■■□□□ 1.55
SSSCA1-206ENST00000531405 ARFGEF2Q9Y6D5 1785 aa24.71■■□□□ 1.55
SSSCA1-206ENST00000531405 DLG5Q8TDM6 1919 aa24.71■■□□□ 1.55
SSSCA1-206ENST00000531405 LMNB1P20700 586 aa24.7■■□□□ 1.54
SSSCA1-206ENST00000531405 PRR5LQ6MZQ0 368 aa24.69■■□□□ 1.54
SSSCA1-206ENST00000531405 ZNF622Q969S3 477 aaKnown RBP eCLIP24.69■■□□□ 1.54
SSSCA1-206ENST00000531405 ZC3H4Q9UPT8 1303 aaKnown RBP24.68■■□□□ 1.54
SSSCA1-206ENST00000531405 NFKBIEO00221 500 aa24.68■■□□□ 1.54
SSSCA1-206ENST00000531405 PIP4K2AP48426 406 aaPredicted RBP24.68■■□□□ 1.54
SSSCA1-206ENST00000531405 FSTL1Q12841 308 aa24.68■■□□□ 1.54
SSSCA1-206ENST00000531405 ZNF219Q9P2Y4 722 aaPredicted RBP24.68■■□□□ 1.54
SSSCA1-206ENST00000531405 PRAMEF22A3QJZ6 481 aa24.67■■□□□ 1.54
SSSCA1-206ENST00000531405 CAMTA2O94983 1202 aa24.67■■□□□ 1.54
SSSCA1-206ENST00000531405 U2AF1L5P0DN76 240 aaPredicted RBP24.66■■□□□ 1.54
SSSCA1-206ENST00000531405 PPP2R1AP30153 589 aa24.66■■□□□ 1.54
SSSCA1-206ENST00000531405 U2AF1Q01081 240 aaKnown RBP eCLIP24.66■■□□□ 1.54
SSSCA1-206ENST00000531405 MCM10Q7L590 875 aa24.66■■□□□ 1.54
SSSCA1-206ENST00000531405 BRIP1Q9BX63 1249 aa24.66■■□□□ 1.54
SSSCA1-206ENST00000531405 USP16Q9Y5T5 823 aa24.66■■□□□ 1.54
SSSCA1-206ENST00000531405 PDE6BP35913 854 aa24.65■■□□□ 1.54
SSSCA1-206ENST00000531405 NPM2Q86SE8 214 aaKnown RBP24.65■■□□□ 1.54
SSSCA1-206ENST00000531405 NUDCQ9Y266 331 aa24.65■■□□□ 1.54
SSSCA1-206ENST00000531405 GLTPD2A6NH11 291 aa24.64■■□□□ 1.54
SSSCA1-206ENST00000531405 C21orf2O43822 256 aa24.64■■□□□ 1.54
SSSCA1-206ENST00000531405 DZIP3Q86Y13 1208 aaKnown RBP24.64■■□□□ 1.54
SSSCA1-206ENST00000531405 SETDB2Q96T68 719 aa24.64■■□□□ 1.54
SSSCA1-206ENST00000531405 LAMB4A4D0S4 1761 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms