RNA–Protein interactions for RNA: ENST00000531339.5

SIPA1-207, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 5

Gene SIPA1, Length 799 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-207ENST00000531339 FMNL2Q96PY5 1086 aa23.4■■□□□ 1.34
SIPA1-207ENST00000531339 BCL2L13Q9BXK5 485 aa23.39■■□□□ 1.33
SIPA1-207ENST00000531339 PAPPAQ13219 1627 aa23.39■■□□□ 1.33
SIPA1-207ENST00000531339 PLSCR1O15162 318 aa23.38■■□□□ 1.33
SIPA1-207ENST00000531339 BRPF1P55201 1214 aaPredicted RBP23.38■■□□□ 1.33
SIPA1-207ENST00000531339 CCDC30Q5VVM6 783 aa23.38■■□□□ 1.33
SIPA1-207ENST00000531339 ACSBG1Q96GR2 724 aa23.38■■□□□ 1.33
SIPA1-207ENST00000531339 ZNF496Q96IT1 587 aaPredicted RBP23.38■■□□□ 1.33
SIPA1-207ENST00000531339 SGIP1Q9BQI5 828 aa23.38■■□□□ 1.33
SIPA1-207ENST00000531339 SNRPA1P09661 255 aaKnown RBP23.36■■□□□ 1.33
SIPA1-207ENST00000531339 MRPL50Q8N5N7 158 aaKnown RBP23.36■■□□□ 1.33
SIPA1-207ENST00000531339 ATG3Q9NT62 314 aa23.36■■□□□ 1.33
SIPA1-207ENST00000531339 UBR2Q8IWV8 1755 aa23.35■■□□□ 1.33
SIPA1-207ENST00000531339 CANXP27824 592 aaKnown RBP23.35■■□□□ 1.33
SIPA1-207ENST00000531339 HDGFL1Q5TGJ6 251 aa23.35■■□□□ 1.33
SIPA1-207ENST00000531339 STK31Q9BXU1 1019 aa23.35■■□□□ 1.33
SIPA1-207ENST00000531339 ASAP1Q9ULH1 1129 aa23.35■■□□□ 1.33
SIPA1-207ENST00000531339 KIF16BQ96L93 1317 aa23.34■■□□□ 1.33
SIPA1-207ENST00000531339 TCERG1O14776 1098 aaKnown RBP23.34■■□□□ 1.33
SIPA1-207ENST00000531339 PLIN1O60240 522 aa23.34■■□□□ 1.33
SIPA1-207ENST00000531339 FRAT1Q92837 279 aaPredicted RBP23.34■■□□□ 1.33
SIPA1-207ENST00000531339 BCL11BQ9C0K0 894 aaPredicted RBP23.34■■□□□ 1.33
SIPA1-207ENST00000531339 KCPQ6ZWJ8 1503 aa23.33■■□□□ 1.33
SIPA1-207ENST00000531339 IPO8O15397 1037 aaKnown RBP23.33■■□□□ 1.33
SIPA1-207ENST00000531339 EIF2S2P20042 333 aaKnown RBP23.33■■□□□ 1.33
SIPA1-207ENST00000531339 PTCD1O75127 700 aaKnown RBP23.32■■□□□ 1.32
SIPA1-207ENST00000531339 ZKSCAN2Q63HK3 967 aa23.31■■□□□ 1.32
SIPA1-207ENST00000531339 NECTIN2Q92692 538 aa23.31■■□□□ 1.32
SIPA1-207ENST00000531339 SMARCC1Q92922 1105 aaPredicted RBP23.31■■□□□ 1.32
SIPA1-207ENST00000531339 NOB1Q9ULX3 412 aaKnown RBP23.31■■□□□ 1.32
SIPA1-207ENST00000531339 CACNA1FO60840 1977 aa23.31■■□□□ 1.32
SIPA1-207ENST00000531339 SLC4A2P04920 1241 aa23.3■■□□□ 1.32
SIPA1-207ENST00000531339 VSIG10Q8N0Z9 540 aa23.3■■□□□ 1.32
SIPA1-207ENST00000531339 NHSQ6T4R5 1651 aa23.29■■□□□ 1.32
SIPA1-207ENST00000531339 PRAMEF22A3QJZ6 481 aa23.29■■□□□ 1.32
SIPA1-207ENST00000531339 MS4A1P11836 297 aa23.29■■□□□ 1.32
SIPA1-207ENST00000531339 FKBP8Q14318 412 aa23.29■■□□□ 1.32
SIPA1-207ENST00000531339 ARHGAP45Q92619 1136 aa23.29■■□□□ 1.32
SIPA1-207ENST00000531339 C5P01031 1676 aa23.28■■□□□ 1.32
SIPA1-207ENST00000531339 IRX6P78412 446 aaPredicted RBP23.28■■□□□ 1.32
SIPA1-207ENST00000531339 PDE3AQ14432 1141 aa23.28■■□□□ 1.32
SIPA1-207ENST00000531339 RBM42Q9BTD8 480 aaKnown RBP23.28■■□□□ 1.32
SIPA1-207ENST00000531339 TEX13AQ9BXU3 409 aaPredicted RBP23.28■■□□□ 1.32
SIPA1-207ENST00000531339 MTFR1LQ9H019 292 aa23.28■■□□□ 1.32
SIPA1-207ENST00000531339 DBF4Q9UBU7 674 aaPredicted RBP23.28■■□□□ 1.32
SIPA1-207ENST00000531339 GTF3C3Q9Y5Q9 886 aa23.28■■□□□ 1.32
SIPA1-207ENST00000531339 ATF7IPQ6VMQ6 1270 aa23.27■■□□□ 1.32
SIPA1-207ENST00000531339 SLC15A2Q16348 729 aa23.26■■□□□ 1.31
SIPA1-207ENST00000531339 CHPF2Q9P2E5 772 aa23.26■■□□□ 1.31
SIPA1-207ENST00000531339 USP16Q9Y5T5 823 aa23.26■■□□□ 1.31
SIPA1-207ENST00000531339 LAMB4A4D0S4 1761 aa23.26■■□□□ 1.31
SIPA1-207ENST00000531339 GPR162Q16538 588 aa23.25■■□□□ 1.31
SIPA1-207ENST00000531339 ARXQ96QS3 562 aa23.25■■□□□ 1.31
SIPA1-207ENST00000531339 API5Q9BZZ5 524 aaKnown RBP23.25■■□□□ 1.31
SIPA1-207ENST00000531339 PTPRCP08575 1304 aa23.25■■□□□ 1.31
SIPA1-207ENST00000531339 DDX21Q9NR30 783 aaKnown RBP eCLIP23.24■■□□□ 1.31
SIPA1-207ENST00000531339 STK32BQ9NY57 414 aa23.24■■□□□ 1.31
SIPA1-207ENST00000531339 ERBB4Q15303 1308 aa23.24■■□□□ 1.31
SIPA1-207ENST00000531339 PALLDQ8WX93 1383 aa23.24■■□□□ 1.31
SIPA1-207ENST00000531339 TRIM27P14373 513 aa23.23■■□□□ 1.31
SIPA1-207ENST00000531339 C20orf194Q5TEA3 1177 aa23.23■■□□□ 1.31
SIPA1-207ENST00000531339 ERICH6BQ5W0A0 696 aa23.23■■□□□ 1.31
SIPA1-207ENST00000531339 DZIP1LQ8IYY4 767 aaKnown RBP23.23■■□□□ 1.31
SIPA1-207ENST00000531339 HYPKQ9NX55 129 aa23.23■■□□□ 1.31
SIPA1-207ENST00000531339 BTAF1O14981 1849 aa23.22■■□□□ 1.31
SIPA1-207ENST00000531339 STARD3NLO95772 234 aa23.22■■□□□ 1.31
SIPA1-207ENST00000531339 TXNRD1Q16881 649 aa23.22■■□□□ 1.31
SIPA1-207ENST00000531339 G2E3Q7L622 706 aa23.22■■□□□ 1.31
SIPA1-207ENST00000531339 FTSJ3Q8IY81 847 aaKnown RBP23.22■■□□□ 1.31
SIPA1-207ENST00000531339 LOC102724428A0A0B4J2F2 783 aa23.21■■□□□ 1.31
SIPA1-207ENST00000531339 SIK1P57059 783 aa23.21■■□□□ 1.31
SIPA1-207ENST00000531339 FLIIQ13045 1269 aa23.21■■□□□ 1.31
SIPA1-207ENST00000531339 DNAJC10Q8IXB1 793 aa23.21■■□□□ 1.31
SIPA1-207ENST00000531339 PANK1Q8TE04 598 aa23.2■■□□□ 1.3
SIPA1-207ENST00000531339 CLUAP1Q96AJ1 413 aa23.2■■□□□ 1.3
SIPA1-207ENST00000531339 SLC4A9Q96Q91 983 aa23.2■■□□□ 1.3
SIPA1-207ENST00000531339 TNNQ9UQP3 1299 aa23.2■■□□□ 1.3
SIPA1-207ENST00000531339 PDIA6Q15084 440 aa23.19■■□□□ 1.3
SIPA1-207ENST00000531339 CRBNQ96SW2 442 aa23.19■■□□□ 1.3
SIPA1-207ENST00000531339 RLBP1P12271 317 aa23.18■■□□□ 1.3
SIPA1-207ENST00000531339 ATP6V1AP38606 617 aa23.18■■□□□ 1.3
SIPA1-207ENST00000531339 FKBP5Q13451 457 aaPredicted RBP23.18■■□□□ 1.3
SIPA1-207ENST00000531339 PROSER3Q2NL68 480 aa23.18■■□□□ 1.3
SIPA1-207ENST00000531339 PHAXQ9H814 394 aaKnown RBP23.18■■□□□ 1.3
SIPA1-207ENST00000531339 ZNF831Q5JPB2 1677 aa23.17■■□□□ 1.3
SIPA1-207ENST00000531339 ANXA1P04083 346 aa23.17■■□□□ 1.3
SIPA1-207ENST00000531339 TJP1Q07157 1748 aa23.16■■□□□ 1.3
SIPA1-207ENST00000531339 CICQ96RK0 1608 aaPredicted RBP23.16■■□□□ 1.3
SIPA1-207ENST00000531339 ABCC4O15439 1325 aa23.16■■□□□ 1.3
SIPA1-207ENST00000531339 A1BGP04217 495 aa23.16■■□□□ 1.3
SIPA1-207ENST00000531339 CYP19A1P11511 503 aaPredicted RBP23.16■■□□□ 1.3
SIPA1-207ENST00000531339 MYL6BP14649 208 aa23.16■■□□□ 1.3
SIPA1-207ENST00000531339 EXOC6Q8TAG9 804 aa23.15■■□□□ 1.3
SIPA1-207ENST00000531339 COG6Q9Y2V7 657 aa23.15■■□□□ 1.3
SIPA1-207ENST00000531339 NBPF26B4DH59 902 aa23.14■■□□□ 1.29
SIPA1-207ENST00000531339 NBPF10Q6P3W6 841 aaKnown RBP23.14■■□□□ 1.29
SIPA1-207ENST00000531339 PELP1Q8IZL8 1130 aaKnown RBP23.14■■□□□ 1.29
SIPA1-207ENST00000531339 NBPF15Q8N660 670 aa23.14■■□□□ 1.29
SIPA1-207ENST00000531339 DDX58O95786 925 aaKnown RBP23.13■■□□□ 1.29
SIPA1-207ENST00000531339 MVPQ14764 893 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms