RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 ZNF790Q6PG37 636 aa20.73■□□□□ 0.91
CTSB-220ENST00000531089 ZNF496Q96IT1 587 aaPredicted RBP20.73■□□□□ 0.91
CTSB-220ENST00000531089 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
CTSB-220ENST00000531089 BCS1LQ9Y276 419 aa20.73■□□□□ 0.91
CTSB-220ENST00000531089 POLRMTO00411 1230 aaKnown RBP20.72■□□□□ 0.91
CTSB-220ENST00000531089 BCL2L12Q9HB09 334 aa20.72■□□□□ 0.91
CTSB-220ENST00000531089 SIPA1L3O60292 1781 aaPredicted RBP20.72■□□□□ 0.91
CTSB-220ENST00000531089 ATP10DQ9P241 1426 aa20.72■□□□□ 0.91
CTSB-220ENST00000531089 ADCY9O60503 1353 aa20.72■□□□□ 0.91
CTSB-220ENST00000531089 BRCA1P38398 1863 aaKnown RBP20.72■□□□□ 0.91
CTSB-220ENST00000531089 TTC5Q8N0Z6 440 aa20.71■□□□□ 0.91
CTSB-220ENST00000531089 CEMIPQ8WUJ3 1361 aa20.71■□□□□ 0.91
CTSB-220ENST00000531089 FCHSD2O94868 740 aa20.7■□□□□ 0.9
CTSB-220ENST00000531089 CANXP27824 592 aaKnown RBP20.7■□□□□ 0.9
CTSB-220ENST00000531089 EIF5P55010 431 aaKnown RBP20.7■□□□□ 0.9
CTSB-220ENST00000531089 KCNQ3O43525 872 aa20.7■□□□□ 0.9
CTSB-220ENST00000531089 STARD3NLO95772 234 aa20.7■□□□□ 0.9
CTSB-220ENST00000531089 U2AF1L5P0DN76 240 aaPredicted RBP20.7■□□□□ 0.9
CTSB-220ENST00000531089 U2AF1Q01081 240 aaKnown RBP eCLIP20.7■□□□□ 0.9
CTSB-220ENST00000531089 NFIXQ14938 502 aa20.7■□□□□ 0.9
CTSB-220ENST00000531089 TEX13AQ9BXU3 409 aaPredicted RBP20.69■□□□□ 0.9
CTSB-220ENST00000531089 COL15A1P39059 1388 aa20.68■□□□□ 0.9
CTSB-220ENST00000531089 HEG1Q9ULI3 1381 aa20.68■□□□□ 0.9
CTSB-220ENST00000531089 AFDNP55196 1824 aaKnown RBP20.68■□□□□ 0.9
CTSB-220ENST00000531089 ARHGAP27Q6ZUM4 889 aa20.68■□□□□ 0.9
CTSB-220ENST00000531089 PIM2Q9P1W9 311 aa20.68■□□□□ 0.9
CTSB-220ENST00000531089 RALBP1Q15311 655 aa20.67■□□□□ 0.9
CTSB-220ENST00000531089 GPBP1L1Q9HC44 474 aaPredicted RBP20.67■□□□□ 0.9
CTSB-220ENST00000531089 BTBD11A6QL63 1104 aa20.66■□□□□ 0.9
CTSB-220ENST00000531089 CHRNA5P30532 468 aa20.66■□□□□ 0.9
CTSB-220ENST00000531089 SENP3-EIF4A1A0A087X0R7 540 aa20.65■□□□□ 0.9
CTSB-220ENST00000531089 ZNF526Q8TF50 670 aaPredicted RBP20.65■□□□□ 0.9
CTSB-220ENST00000531089 FMNL2Q96PY5 1086 aa20.65■□□□□ 0.9
CTSB-220ENST00000531089 ARFGEF1Q9Y6D6 1849 aa20.65■□□□□ 0.9
CTSB-220ENST00000531089 A1BGP04217 495 aa20.64■□□□□ 0.89
CTSB-220ENST00000531089 SERPINB2P05120 415 aa20.64■□□□□ 0.89
CTSB-220ENST00000531089 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
CTSB-220ENST00000531089 CEP350Q5VT06 3117 aa20.64■□□□□ 0.89
CTSB-220ENST00000531089 A0A087WZG4 1122 aa20.63■□□□□ 0.89
CTSB-220ENST00000531089 DALRD3Q5D0E6 543 aaKnown RBP20.63■□□□□ 0.89
CTSB-220ENST00000531089 MCM10Q7L590 875 aa20.63■□□□□ 0.89
CTSB-220ENST00000531089 DCTN1Q14203 1278 aa20.62■□□□□ 0.89
CTSB-220ENST00000531089 TBC1D2BQ9UPU7 963 aa20.62■□□□□ 0.89
CTSB-220ENST00000531089 NRXN2Q9P2S2 1712 aa20.62■□□□□ 0.89
CTSB-220ENST00000531089 HTATSF1O43719 755 aaKnown RBP20.61■□□□□ 0.89
CTSB-220ENST00000531089 IL6STP40189 918 aaPredicted RBP20.61■□□□□ 0.89
CTSB-220ENST00000531089 RTF1Q92541 710 aaKnown RBP20.61■□□□□ 0.89
CTSB-220ENST00000531089 PRAMEF22A3QJZ6 481 aa20.6■□□□□ 0.89
CTSB-220ENST00000531089 TBC1D9BQ66K14 1250 aa20.6■□□□□ 0.89
CTSB-220ENST00000531089 BICDL1Q6ZP65 573 aa20.6■□□□□ 0.89
CTSB-220ENST00000531089 SBF1O95248 1867 aa20.59■□□□□ 0.89
CTSB-220ENST00000531089 KIF3CO14782 793 aa20.59■□□□□ 0.89
CTSB-220ENST00000531089 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.88
CTSB-220ENST00000531089 PLEKHF1Q96S99 279 aa20.58■□□□□ 0.88
CTSB-220ENST00000531089 TAF7Q15545 349 aaPredicted RBP20.57■□□□□ 0.88
CTSB-220ENST00000531089 C9orf131Q5VYM1 1079 aa20.57■□□□□ 0.88
CTSB-220ENST00000531089 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
CTSB-220ENST00000531089 DLG5Q8TDM6 1919 aa20.56■□□□□ 0.88
CTSB-220ENST00000531089 CAMTA2O94983 1202 aa20.56■□□□□ 0.88
CTSB-220ENST00000531089 NEFMP07197 916 aa20.56■□□□□ 0.88
CTSB-220ENST00000531089 SNRPA1P09661 255 aaKnown RBP20.56■□□□□ 0.88
CTSB-220ENST00000531089 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
CTSB-220ENST00000531089 MYBBP1AQ9BQG0 1328 aaKnown RBP20.56■□□□□ 0.88
CTSB-220ENST00000531089 PIP4K2AP48426 406 aaPredicted RBP20.55■□□□□ 0.88
CTSB-220ENST00000531089 PNNQ9H307 717 aaKnown RBP20.55■□□□□ 0.88
CTSB-220ENST00000531089 C2CD5Q86YS7 1000 aa20.53■□□□□ 0.88
CTSB-220ENST00000531089 CARMIL3Q8ND23 1372 aa20.53■□□□□ 0.88
CTSB-220ENST00000531089 NBPF26B4DH59 902 aa20.53■□□□□ 0.88
CTSB-220ENST00000531089 H0YIN7 160 aa20.53■□□□□ 0.88
CTSB-220ENST00000531089 PRR5LQ6MZQ0 368 aa20.53■□□□□ 0.88
CTSB-220ENST00000531089 NBPF10Q6P3W6 841 aaKnown RBP20.53■□□□□ 0.88
CTSB-220ENST00000531089 DZIP3Q86Y13 1208 aaKnown RBP20.53■□□□□ 0.88
CTSB-220ENST00000531089 CCDC24Q8N4L8 307 aa20.53■□□□□ 0.88
CTSB-220ENST00000531089 NBPF15Q8N660 670 aa20.53■□□□□ 0.88
CTSB-220ENST00000531089 TTLL6Q8N841 843 aa20.53■□□□□ 0.88
CTSB-220ENST00000531089 PRKRIP1Q9H875 184 aaPredicted RBP20.53■□□□□ 0.88
CTSB-220ENST00000531089 ANKRD31Q8N7Z5 1873 aa20.52■□□□□ 0.88
CTSB-220ENST00000531089 NPM2Q86SE8 214 aaKnown RBP20.52■□□□□ 0.87
CTSB-220ENST00000531089 SETDB2Q96T68 719 aa20.52■□□□□ 0.87
CTSB-220ENST00000531089 BRIP1Q9BX63 1249 aa20.52■□□□□ 0.87
CTSB-220ENST00000531089 DLEC1Q9Y238 1755 aa20.51■□□□□ 0.87
CTSB-220ENST00000531089 CCDC88AQ3V6T2 1871 aa20.51■□□□□ 0.87
CTSB-220ENST00000531089 NMRK2Q9NPI5 230 aa20.51■□□□□ 0.87
CTSB-220ENST00000531089 PRELPP51888 382 aa20.5■□□□□ 0.87
CTSB-220ENST00000531089 NFE2L2Q16236 605 aa20.5■□□□□ 0.87
CTSB-220ENST00000531089 CLEC4GQ6UXB4 293 aa20.5■□□□□ 0.87
CTSB-220ENST00000531089 RNF181Q9P0P0 153 aa20.5■□□□□ 0.87
CTSB-220ENST00000531089 SCN7AQ01118 1682 aa20.49■□□□□ 0.87
CTSB-220ENST00000531089 HSPA6P17066 643 aa20.49■□□□□ 0.87
CTSB-220ENST00000531089 PDE6BP35913 854 aa20.49■□□□□ 0.87
CTSB-220ENST00000531089 PDZRN3Q9UPQ7 1066 aa20.48■□□□□ 0.87
CTSB-220ENST00000531089 TOMM70O94826 608 aa20.47■□□□□ 0.87
CTSB-220ENST00000531089 RASSF7Q02833 373 aa20.47■□□□□ 0.87
CTSB-220ENST00000531089 ZNF622Q969S3 477 aaKnown RBP eCLIP20.47■□□□□ 0.87
CTSB-220ENST00000531089 THUMPD2Q9BTF0 503 aaKnown RBP20.47■□□□□ 0.87
CTSB-220ENST00000531089 EIF4A1P60842 406 aaKnown RBP20.46■□□□□ 0.87
CTSB-220ENST00000531089 PNISRQ8TF01 805 aaKnown RBP20.46■□□□□ 0.87
CTSB-220ENST00000531089 BCORQ6W2J9 1755 aa20.46■□□□□ 0.87
CTSB-220ENST00000531089 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
CTSB-220ENST00000531089 CNBD1Q8NA66 436 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms