RNA–Protein interactions for RNA: ENST00000531045.1

PCNX3-204, Transcript of pecanex 3, humanhuman

TSL 3

Gene PCNX3, Length 266 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-204ENST00000531045 CHD4Q14839 1912 aa22.31■■□□□ 1.16
PCNX3-204ENST00000531045 EIF5P55010 431 aaKnown RBP22.31■■□□□ 1.16
PCNX3-204ENST00000531045 COL15A1P39059 1388 aa22.3■■□□□ 1.16
PCNX3-204ENST00000531045 KCNA3P22001 575 aa22.3■■□□□ 1.16
PCNX3-204ENST00000531045 USPL1Q5W0Q7 1092 aa22.3■■□□□ 1.16
PCNX3-204ENST00000531045 POLRMTO00411 1230 aaKnown RBP22.29■■□□□ 1.16
PCNX3-204ENST00000531045 HTATSF1O43719 755 aaKnown RBP22.29■■□□□ 1.16
PCNX3-204ENST00000531045 TTC5Q8N0Z6 440 aa22.29■■□□□ 1.16
PCNX3-204ENST00000531045 NARFQ9UHQ1 456 aa22.29■■□□□ 1.16
PCNX3-204ENST00000531045 PRAMEF22A3QJZ6 481 aa22.28■■□□□ 1.16
PCNX3-204ENST00000531045 ZNF316A6NFI3 1004 aaPredicted RBP22.28■■□□□ 1.16
PCNX3-204ENST00000531045 BTBD11A6QL63 1104 aa22.28■■□□□ 1.16
PCNX3-204ENST00000531045 GRIN3BO60391 1043 aa22.28■■□□□ 1.16
PCNX3-204ENST00000531045 RALBP1Q15311 655 aa22.28■■□□□ 1.16
PCNX3-204ENST00000531045 TGFB2P61812 414 aa22.27■■□□□ 1.16
PCNX3-204ENST00000531045 WWC3Q9ULE0 1092 aa22.27■■□□□ 1.16
PCNX3-204ENST00000531045 A0A0G2JLW4 131 aa22.26■■□□□ 1.15
PCNX3-204ENST00000531045 FMNL2Q96PY5 1086 aa22.26■■□□□ 1.15
PCNX3-204ENST00000531045 CANXP27824 592 aaKnown RBP22.25■■□□□ 1.15
PCNX3-204ENST00000531045 NFIXQ14938 502 aa22.25■■□□□ 1.15
PCNX3-204ENST00000531045 USP16Q9Y5T5 823 aa22.25■■□□□ 1.15
PCNX3-204ENST00000531045 PARP3Q9Y6F1 533 aa22.25■■□□□ 1.15
PCNX3-204ENST00000531045 N4BP2Q86UW6 1770 aaPredicted RBP22.25■■□□□ 1.15
PCNX3-204ENST00000531045 STARD3NLO95772 234 aa22.24■■□□□ 1.15
PCNX3-204ENST00000531045 A1BGP04217 495 aa22.24■■□□□ 1.15
PCNX3-204ENST00000531045 DPEP1P16444 411 aa22.24■■□□□ 1.15
PCNX3-204ENST00000531045 NRXN2Q9P2S2 1712 aa22.23■■□□□ 1.15
PCNX3-204ENST00000531045 TEX13AQ9BXU3 409 aaPredicted RBP22.23■■□□□ 1.15
PCNX3-204ENST00000531045 ZPR1O75312 459 aa22.22■■□□□ 1.15
PCNX3-204ENST00000531045 RTF1Q92541 710 aaKnown RBP22.22■■□□□ 1.15
PCNX3-204ENST00000531045 ADCY9O60503 1353 aa22.22■■□□□ 1.15
PCNX3-204ENST00000531045 BRCA1P38398 1863 aaKnown RBP22.22■■□□□ 1.15
PCNX3-204ENST00000531045 IL6STP40189 918 aaPredicted RBP22.21■■□□□ 1.15
PCNX3-204ENST00000531045 NFE2L2Q16236 605 aa22.21■■□□□ 1.15
PCNX3-204ENST00000531045 MIS18AQ9NYP9 233 aa22.21■■□□□ 1.15
PCNX3-204ENST00000531045 DLG5Q8TDM6 1919 aa22.21■■□□□ 1.15
PCNX3-204ENST00000531045 TAF7Q15545 349 aaPredicted RBP22.2■■□□□ 1.14
PCNX3-204ENST00000531045 THUMPD2Q9BTF0 503 aaKnown RBP22.2■■□□□ 1.14
PCNX3-204ENST00000531045 MYBBP1AQ9BQG0 1328 aaKnown RBP22.19■■□□□ 1.14
PCNX3-204ENST00000531045 SCN7AQ01118 1682 aa22.18■■□□□ 1.14
PCNX3-204ENST00000531045 NBPF26B4DH59 902 aa22.18■■□□□ 1.14
PCNX3-204ENST00000531045 PIP4K2AP48426 406 aaPredicted RBP22.18■■□□□ 1.14
PCNX3-204ENST00000531045 NBPF10Q6P3W6 841 aaKnown RBP22.18■■□□□ 1.14
PCNX3-204ENST00000531045 NBPF15Q8N660 670 aa22.18■■□□□ 1.14
PCNX3-204ENST00000531045 TBC1D2BQ9UPU7 963 aa22.18■■□□□ 1.14
PCNX3-204ENST00000531045 AFDNP55196 1824 aaKnown RBP22.17■■□□□ 1.14
PCNX3-204ENST00000531045 CAMTA2O94983 1202 aa22.17■■□□□ 1.14
PCNX3-204ENST00000531045 KDM3BQ7LBC6 1761 aa22.17■■□□□ 1.14
PCNX3-204ENST00000531045 CARMIL3Q8ND23 1372 aa22.16■■□□□ 1.14
PCNX3-204ENST00000531045 SNRPA1P09661 255 aaKnown RBP22.16■■□□□ 1.14
PCNX3-204ENST00000531045 CHRNA5P30532 468 aa22.16■■□□□ 1.14
PCNX3-204ENST00000531045 TBC1D9BQ66K14 1250 aa22.16■■□□□ 1.14
PCNX3-204ENST00000531045 A0A087WZG4 1122 aa22.15■■□□□ 1.14
PCNX3-204ENST00000531045 SERPINB2P05120 415 aa22.15■■□□□ 1.14
PCNX3-204ENST00000531045 PRKRIP1Q9H875 184 aaPredicted RBP22.15■■□□□ 1.14
PCNX3-204ENST00000531045 BCS1LQ9Y276 419 aa22.14■■□□□ 1.13
PCNX3-204ENST00000531045 EIF4A1P60842 406 aaKnown RBP22.13■■□□□ 1.13
PCNX3-204ENST00000531045 ATP10DQ9P241 1426 aa22.13■■□□□ 1.13
PCNX3-204ENST00000531045 GIGYF1O75420 1035 aaPredicted RBP22.12■■□□□ 1.13
PCNX3-204ENST00000531045 BCORQ6W2J9 1755 aa22.12■■□□□ 1.13
PCNX3-204ENST00000531045 TMPOP42166 694 aaKnown RBP22.11■■□□□ 1.13
PCNX3-204ENST00000531045 PIM2Q9P1W9 311 aa22.11■■□□□ 1.13
PCNX3-204ENST00000531045 BICDL1Q6ZP65 573 aa22.1■■□□□ 1.13
PCNX3-204ENST00000531045 PNNQ9H307 717 aaKnown RBP22.1■■□□□ 1.13
PCNX3-204ENST00000531045 RIPK4P57078 832 aa22.09■■□□□ 1.13
PCNX3-204ENST00000531045 DZIP3Q86Y13 1208 aaKnown RBP22.09■■□□□ 1.13
PCNX3-204ENST00000531045 PNISRQ8TF01 805 aaKnown RBP22.09■■□□□ 1.13
PCNX3-204ENST00000531045 ADAMTS8Q9UP79 889 aa22.09■■□□□ 1.13
PCNX3-204ENST00000531045 ZNF330Q9Y3S2 320 aaPredicted RBP22.09■■□□□ 1.13
PCNX3-204ENST00000531045 MAPK8IP3Q9UPT6 1336 aa22.08■■□□□ 1.13
PCNX3-204ENST00000531045 ARFGEF1Q9Y6D6 1849 aa22.08■■□□□ 1.13
PCNX3-204ENST00000531045 PRR5LQ6MZQ0 368 aa22.08■■□□□ 1.13
PCNX3-204ENST00000531045 TRIM35Q9UPQ4 493 aa22.08■■□□□ 1.13
PCNX3-204ENST00000531045 ANKRD31Q8N7Z5 1873 aa22.08■■□□□ 1.13
PCNX3-204ENST00000531045 NEFMP07197 916 aa22.07■■□□□ 1.12
PCNX3-204ENST00000531045 CCDC146Q8IYE0 955 aa22.07■■□□□ 1.12
PCNX3-204ENST00000531045 LAMB4A4D0S4 1761 aa22.07■■□□□ 1.12
PCNX3-204ENST00000531045 DALRD3Q5D0E6 543 aaKnown RBP22.06■■□□□ 1.12
PCNX3-204ENST00000531045 LRP10Q7Z4F1 713 aa22.06■■□□□ 1.12
PCNX3-204ENST00000531045 CCDC24Q8N4L8 307 aa22.06■■□□□ 1.12
PCNX3-204ENST00000531045 RRP7AQ9Y3A4 280 aaKnown RBP22.06■■□□□ 1.12
PCNX3-204ENST00000531045 DLEC1Q9Y238 1755 aa22.06■■□□□ 1.12
PCNX3-204ENST00000531045 CLEC4GQ6UXB4 293 aa22.05■■□□□ 1.12
PCNX3-204ENST00000531045 RGL2O15211 777 aa22.04■■□□□ 1.12
PCNX3-204ENST00000531045 PRELPP51888 382 aa22.04■■□□□ 1.12
PCNX3-204ENST00000531045 C1QTNF8P60827 252 aa22.04■■□□□ 1.12
PCNX3-204ENST00000531045 HLFQ16534 295 aa22.04■■□□□ 1.12
PCNX3-204ENST00000531045 ARHGAP27Q6ZUM4 889 aa22.04■■□□□ 1.12
PCNX3-204ENST00000531045 RUNDC1Q96C34 613 aa22.03■■□□□ 1.12
PCNX3-204ENST00000531045 BRIP1Q9BX63 1249 aa22.03■■□□□ 1.12
PCNX3-204ENST00000531045 PDIA6Q15084 440 aa22.02■■□□□ 1.12
PCNX3-204ENST00000531045 C2CD5Q86YS7 1000 aa22.02■■□□□ 1.12
PCNX3-204ENST00000531045 BABAM1Q9NWV8 329 aa22.02■■□□□ 1.12
PCNX3-204ENST00000531045 COL11A2P13942 1736 aaPredicted RBP22.02■■□□□ 1.12
PCNX3-204ENST00000531045 CCDC184Q52MB2 194 aa22.01■■□□□ 1.11
PCNX3-204ENST00000531045 SETDB2Q96T68 719 aa22.01■■□□□ 1.11
PCNX3-204ENST00000531045 CHL1O00533 1208 aa22■■□□□ 1.11
PCNX3-204ENST00000531045 TTLL7Q6ZT98 887 aa22■■□□□ 1.11
PCNX3-204ENST00000531045 TSPYL4Q9UJ04 414 aa22■■□□□ 1.11
PCNX3-204ENST00000531045 KLRG2A4D1S0 409 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms