RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 GSTTP1A0A1W2PQM5 241 aa8.46□□□□□ -1.06
CTNND1-229ENST00000531014 GRIN3BO60391 1043 aa8.46□□□□□ -1.06
CTNND1-229ENST00000531014 ZSCAN30Q86W11 494 aa8.46□□□□□ -1.06
CTNND1-229ENST00000531014 RPUSD2Q8IZ73 545 aaKnown RBP8.46□□□□□ -1.06
CTNND1-229ENST00000531014 TANGO6Q9C0B7 1094 aa8.46□□□□□ -1.06
CTNND1-229ENST00000531014 GOLGA6L9A6NEM1 432 aa8.46□□□□□ -1.06
CTNND1-229ENST00000531014 ARHGEF40Q8TER5 1519 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 A0A087WZG4 1122 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 POTEB2H3BUK9 544 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 ZPR1O75312 459 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 STK38Q15208 465 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 SPECC1Q5M775 1068 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
CTNND1-229ENST00000531014 SHROOM2Q13796 1616 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 IVLP07476 585 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 HOOK3Q86VS8 718 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 HSPA5P11021 654 aaKnown RBP8.45□□□□□ -1.06
CTNND1-229ENST00000531014 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
CTNND1-229ENST00000531014 CCDC158Q5M9N0 1113 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
CTNND1-229ENST00000531014 TFCP2L1Q9NZI6 479 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 CCDC61Q9Y6R9 512 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 KIF5BP33176 963 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 LMAN1P49257 510 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 KANK4Q5T7N3 995 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-229ENST00000531014 SERPINA10Q9UK55 444 aa8.45□□□□□ -1.06
CTNND1-229ENST00000531014 ZSCAN12O43309 604 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 ARID4AP29374 1257 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-229ENST00000531014 MCM2P49736 904 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 SEPT14Q6ZU15 432 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 KIF18AQ8NI77 898 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 MYO5CQ9NQX4 1742 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 PTPN14Q15678 1187 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 CEP120Q8N960 986 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 NUP133Q8WUM0 1156 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 TNMDQ9H2S6 317 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 CABP2Q9NPB3 220 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 UNC5CLQ8IV45 518 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 ZMAT2Q96NC0 199 aaKnown RBP8.44□□□□□ -1.06
CTNND1-229ENST00000531014 DDX19BQ9UMR2 479 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 ZNF652Q9Y2D9 606 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 SHANK2Q9UPX8 1470 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 ERC2O15083 957 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 CCDC27Q2M243 656 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 SEPT10Q9P0V9 454 aa8.44□□□□□ -1.06
CTNND1-229ENST00000531014 RIMS1Q86UR5 1692 aaKnown RBP8.44□□□□□ -1.06
CTNND1-229ENST00000531014 A0A1B0GUA9 196 aa8.43□□□□□ -1.06
CTNND1-229ENST00000531014 NUTM2GQ5VZR2 741 aa8.43□□□□□ -1.06
CTNND1-229ENST00000531014 RSRC1Q96IZ7 334 aaKnown RBP8.43□□□□□ -1.06
CTNND1-229ENST00000531014 RBM42Q9BTD8 480 aaKnown RBP8.43□□□□□ -1.06
CTNND1-229ENST00000531014 CEP57L1Q8IYX8 460 aa8.43□□□□□ -1.06
CTNND1-229ENST00000531014 EXOC6Q8TAG9 804 aa8.43□□□□□ -1.06
CTNND1-229ENST00000531014 CDK19Q9BWU1 502 aa8.43□□□□□ -1.06
CTNND1-229ENST00000531014 HOMER2Q9NSB8 354 aa8.43□□□□□ -1.06
CTNND1-229ENST00000531014 AGLP35573 1532 aa8.43□□□□□ -1.06
CTNND1-229ENST00000531014 FIBPO43427 364 aa8.43□□□□□ -1.06
CTNND1-229ENST00000531014 RRP1P56182 461 aaKnown RBP8.43□□□□□ -1.06
CTNND1-229ENST00000531014 MSL1Q68DK7 614 aa8.43□□□□□ -1.06
CTNND1-229ENST00000531014 ANAPC4Q9UJX5 808 aa8.43□□□□□ -1.06
CTNND1-229ENST00000531014 GTPBP4Q9BZE4 634 aaKnown RBP8.43□□□□□ -1.06
CTNND1-229ENST00000531014 PLEKHG1Q9ULL1 1385 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 KIF5CO60282 957 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 POTEJP0CG39 1038 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 PARP3Q9Y6F1 533 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 FSD2A1L4K1 749 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 ATP2B1P20020 1258 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 SART3Q15020 963 aaKnown RBP8.42□□□□□ -1.06
CTNND1-229ENST00000531014 ERC1Q8IUD2 1116 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 CEP112Q8N8E3 955 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 CRBNQ96SW2 442 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 TAOK3Q9H2K8 898 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 PAFAH1B1P43034 410 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 NBPF1Q3BBV0 1214 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 GBP6Q6ZN66 633 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 CEP57Q86XR8 500 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 VPS37DQ86XT2 251 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 TCP11L2Q8N4U5 519 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 GOPCQ9HD26 462 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 SMTNL1A8MU46 457 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 TACC1O75410 805 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 CDC45O75419 566 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 G3BP1Q13283 466 aaKnown RBP eCLIP8.42□□□□□ -1.068e-9■□□□□ 11.1
CTNND1-229ENST00000531014 MPNDQ8N594 471 aa8.42□□□□□ -1.06
CTNND1-229ENST00000531014 NSRP1Q9H0G5 558 aaKnown RBP8.42□□□□□ -1.06
CTNND1-229ENST00000531014 CASQ1P31415 396 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 KIF4BQ2VIQ3 1234 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 TTC31Q49AM3 519 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-229ENST00000531014 RAB3IL1Q8TBN0 382 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 TMOD3Q9NYL9 352 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 C9orf78Q9NZ63 289 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-229ENST00000531014 URI1O94763 535 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-229ENST00000531014 SPA17Q15506 151 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 CCDC83Q8IWF9 413 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 ZNF397Q8NF99 534 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-229ENST00000531014 COG6Q9Y2V7 657 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 LMOD1P29536 600 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-229ENST00000531014 EIF5P55010 431 aaKnown RBP8.41□□□□□ -1.06
CTNND1-229ENST00000531014 CCDC174Q6PII3 467 aa8.41□□□□□ -1.06
CTNND1-229ENST00000531014 GBP7Q8N8V2 638 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-229ENST00000531014 NUDT16Q96DE0 195 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms