RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 CPS1P31327 1500 aa14.01□□□□□ -0.17
TRIM3-210ENST00000530724 GIGYF1O75420 1035 aaPredicted RBP14.01□□□□□ -0.17
TRIM3-210ENST00000530724 SYT1P21579 422 aa14.01□□□□□ -0.17
TRIM3-210ENST00000530724 SLC20A2Q08357 652 aa14.01□□□□□ -0.17
TRIM3-210ENST00000530724 NCBP1Q09161 790 aaKnown RBP14.01□□□□□ -0.17
TRIM3-210ENST00000530724 VPS53Q5VIR6 699 aa14.01□□□□□ -0.17
TRIM3-210ENST00000530724 GGT6Q6P531 493 aa14.01□□□□□ -0.17
TRIM3-210ENST00000530724 SARM1Q6SZW1 724 aa14.01□□□□□ -0.17
TRIM3-210ENST00000530724 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
TRIM3-210ENST00000530724 TDRD7Q8NHU6 1098 aaKnown RBP14.01□□□□□ -0.17
TRIM3-210ENST00000530724 COG3Q96JB2 828 aa14.01□□□□□ -0.17
TRIM3-210ENST00000530724 LSG1Q9H089 658 aaKnown RBP14.01□□□□□ -0.17
TRIM3-210ENST00000530724 XRN1Q8IZH2 1706 aaKnown RBP14.01□□□□□ -0.17
TRIM3-210ENST00000530724 WASLO00401 505 aaPredicted RBP14□□□□□ -0.17
TRIM3-210ENST00000530724 ELL2O00472 640 aaPredicted RBP14□□□□□ -0.17
TRIM3-210ENST00000530724 POLA2Q14181 598 aa14□□□□□ -0.17
TRIM3-210ENST00000530724 PLA2G4DQ86XP0 818 aa14□□□□□ -0.17
TRIM3-210ENST00000530724 CHAMP1Q96JM3 812 aa14□□□□□ -0.17
TRIM3-210ENST00000530724 ANO2Q9NQ90 1003 aa14□□□□□ -0.17
TRIM3-210ENST00000530724 DDX19AQ9NUU7 478 aaKnown RBP14□□□□□ -0.17
TRIM3-210ENST00000530724 PYCARDQ9ULZ3 195 aa14□□□□□ -0.17
TRIM3-210ENST00000530724 MTMR6Q9Y217 621 aa14□□□□□ -0.17
TRIM3-210ENST00000530724 SNX14Q9Y5W7 946 aa14□□□□□ -0.17
TRIM3-210ENST00000530724 AGLP35573 1532 aa14□□□□□ -0.17
TRIM3-210ENST00000530724 AP5Z1O43299 807 aa13.99□□□□□ -0.17
TRIM3-210ENST00000530724 RBM6P78332 1123 aaKnown RBP13.99□□□□□ -0.17
TRIM3-210ENST00000530724 CNPY2Q9Y2B0 182 aa13.99□□□□□ -0.17
TRIM3-210ENST00000530724 CHD2O14647 1828 aaKnown RBP13.99□□□□□ -0.17
TRIM3-210ENST00000530724 A2ML1A8K2U0 1454 aa13.99□□□□□ -0.17
TRIM3-210ENST00000530724 TTC21AQ8NDW8 1320 aa13.98□□□□□ -0.17
TRIM3-210ENST00000530724 TUBB4AP04350 444 aa13.98□□□□□ -0.17
TRIM3-210ENST00000530724 PDCP20941 246 aa13.98□□□□□ -0.17
TRIM3-210ENST00000530724 DHX8Q14562 1220 aaKnown RBP13.98□□□□□ -0.17
TRIM3-210ENST00000530724 KRT24Q2M2I5 525 aa13.98□□□□□ -0.17
TRIM3-210ENST00000530724 RNF20Q5VTR2 975 aa13.98□□□□□ -0.17
TRIM3-210ENST00000530724 RUFY3Q7L099 469 aa13.98□□□□□ -0.17
TRIM3-210ENST00000530724 ZSWIM6Q9HCJ5 1215 aa13.98□□□□□ -0.17
TRIM3-210ENST00000530724 STK26Q9P289 416 aa13.98□□□□□ -0.17
TRIM3-210ENST00000530724 SMC3Q9UQE7 1217 aa13.98□□□□□ -0.17
TRIM3-210ENST00000530724 TTC41PQ6P2S7 1318 aa13.97□□□□□ -0.17
TRIM3-210ENST00000530724 KIF2AO00139 706 aaPredicted RBP13.97□□□□□ -0.17
TRIM3-210ENST00000530724 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
TRIM3-210ENST00000530724 KCNJ6P48051 423 aa13.97□□□□□ -0.17
TRIM3-210ENST00000530724 CBX1P83916 185 aa13.97□□□□□ -0.17
TRIM3-210ENST00000530724 EIF4A2Q14240 407 aaKnown RBP13.97□□□□□ -0.17
TRIM3-210ENST00000530724 MAP3K11Q16584 847 aa13.97□□□□□ -0.17
TRIM3-210ENST00000530724 PI4K2BQ8TCG2 481 aa13.97□□□□□ -0.17
TRIM3-210ENST00000530724 CHMP4AQ9BY43 222 aa13.97□□□□□ -0.17
TRIM3-210ENST00000530724 DNAJC5Q9H3Z4 198 aa13.97□□□□□ -0.17
TRIM3-210ENST00000530724 HYPKQ9NX55 129 aa13.97□□□□□ -0.17
TRIM3-210ENST00000530724 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
TRIM3-210ENST00000530724 RICTORQ6R327 1708 aa13.97□□□□□ -0.17
TRIM3-210ENST00000530724 FAM208AQ9UK61 1670 aaKnown RBP13.96□□□□□ -0.17
TRIM3-210ENST00000530724 FAM83GA6ND36 823 aa13.96□□□□□ -0.17
TRIM3-210ENST00000530724 AK2P54819 239 aa13.96□□□□□ -0.17
TRIM3-210ENST00000530724 HSP90AB4PQ58FF6 505 aa13.96□□□□□ -0.17
TRIM3-210ENST00000530724 ZNF830Q96NB3 372 aaPredicted RBP13.96□□□□□ -0.17
TRIM3-210ENST00000530724 SCAND2PQ9GZW5 306 aaPredicted RBP13.96□□□□□ -0.17
TRIM3-210ENST00000530724 ZHX1Q9UKY1 873 aaPredicted RBP13.96□□□□□ -0.17
TRIM3-210ENST00000530724 CACNA1FO60840 1977 aa13.96□□□□□ -0.18
TRIM3-210ENST00000530724 NPHP3Q7Z494 1330 aa13.95□□□□□ -0.18
TRIM3-210ENST00000530724 MYO5BQ9ULV0 1848 aa13.95□□□□□ -0.18
TRIM3-210ENST00000530724 SLFN14P0C7P3 912 aa13.95□□□□□ -0.18
TRIM3-210ENST00000530724 ZNF75DP51815 510 aa13.95□□□□□ -0.18
TRIM3-210ENST00000530724 SAFB2Q14151 953 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRIM3-210ENST00000530724 NME9Q86XW9 330 aa13.95□□□□□ -0.18
TRIM3-210ENST00000530724 ZNF397Q8NF99 534 aaPredicted RBP13.95□□□□□ -0.18
TRIM3-210ENST00000530724 MRFAP1L1Q96HT8 127 aa13.95□□□□□ -0.18
TRIM3-210ENST00000530724 PRDM10Q9NQV6 1147 aa13.95□□□□□ -0.18
TRIM3-210ENST00000530724 MRVI1Q9Y6F6 885 aa13.95□□□□□ -0.18
TRIM3-210ENST00000530724 PTPRUQ92729 1446 aa13.95□□□□□ -0.18
TRIM3-210ENST00000530724 NRXN3Q9Y4C0 1643 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 PLEKHG3A1L390 1219 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 KRT85P78386 507 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 TYRO3Q06418 890 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 MTX1Q13505 466 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 CCDC30Q5VVM6 783 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 PLPPR3Q6T4P5 718 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRIM3-210ENST00000530724 CNTROBQ8N137 903 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 RUFY2Q8WXA3 655 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 UPF3BQ9BZI7 483 aaKnown RBP13.94□□□□□ -0.18
TRIM3-210ENST00000530724 NUP62CLQ9H1M0 184 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 CLSTN2Q9H4D0 955 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 GDPD2Q9HCC8 539 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 TOPAZ1Q8N9V7 1692 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 JCADQ9P266 1359 aa13.94□□□□□ -0.18
TRIM3-210ENST00000530724 CCDC66A2RUB6 948 aa13.93□□□□□ -0.18
TRIM3-210ENST00000530724 ZSCAN25Q6NSZ9 544 aa13.93□□□□□ -0.18
TRIM3-210ENST00000530724 GIMAP6Q6P9H5 292 aa13.93□□□□□ -0.18
TRIM3-210ENST00000530724 NYAP1Q6ZVC0 841 aa13.93□□□□□ -0.18
TRIM3-210ENST00000530724 KIF18AQ8NI77 898 aa13.93□□□□□ -0.18
TRIM3-210ENST00000530724 TSC1Q92574 1164 aa13.93□□□□□ -0.18
TRIM3-210ENST00000530724 KIF1BPQ96EK5 621 aa13.93□□□□□ -0.18
TRIM3-210ENST00000530724 EXOC6BQ9Y2D4 811 aa13.93□□□□□ -0.18
TRIM3-210ENST00000530724 HOXB7P09629 217 aa13.92□□□□□ -0.18
TRIM3-210ENST00000530724 U2AF2P26368 475 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRIM3-210ENST00000530724 FGD1P98174 961 aa13.92□□□□□ -0.18
TRIM3-210ENST00000530724 FLIIQ13045 1269 aa13.92□□□□□ -0.18
TRIM3-210ENST00000530724 ANKRD1Q15327 319 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms