RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 SENP3-EIF4A1A0A087X0R7 540 aa22.8■■□□□ 1.24
PKP3-207ENST00000530695 GPBP1L1Q9HC44 474 aaPredicted RBP22.8■■□□□ 1.24
PKP3-207ENST00000530695 PPP2R1AP30153 589 aa22.79■■□□□ 1.24
PKP3-207ENST00000530695 PRKAR2BP31323 418 aa22.79■■□□□ 1.24
PKP3-207ENST00000530695 RSPH6AQ9H0K4 717 aa22.79■■□□□ 1.24
PKP3-207ENST00000530695 NUDCQ9Y266 331 aa22.79■■□□□ 1.24
PKP3-207ENST00000530695 TM4SF1P30408 202 aa22.78■■□□□ 1.24
PKP3-207ENST00000530695 ZNF526Q8TF50 670 aaPredicted RBP22.78■■□□□ 1.24
PKP3-207ENST00000530695 PHACTR3Q96KR7 559 aa22.78■■□□□ 1.24
PKP3-207ENST00000530695 NARFQ9UHQ1 456 aa22.78■■□□□ 1.24
PKP3-207ENST00000530695 POLRMTO00411 1230 aaKnown RBP22.77■■□□□ 1.24
PKP3-207ENST00000530695 FCHSD2O94868 740 aa22.77■■□□□ 1.24
PKP3-207ENST00000530695 ZNF790Q6PG37 636 aa22.77■■□□□ 1.24
PKP3-207ENST00000530695 STARD3NLO95772 234 aa22.76■■□□□ 1.23
PKP3-207ENST00000530695 KCNA3P22001 575 aa22.76■■□□□ 1.23
PKP3-207ENST00000530695 CANXP27824 592 aaKnown RBP22.76■■□□□ 1.23
PKP3-207ENST00000530695 ZNF496Q96IT1 587 aaPredicted RBP22.76■■□□□ 1.23
PKP3-207ENST00000530695 NRXN2Q9P2S2 1712 aa22.75■■□□□ 1.23
PKP3-207ENST00000530695 U2AF1L5P0DN76 240 aaPredicted RBP22.75■■□□□ 1.23
PKP3-207ENST00000530695 U2AF1Q01081 240 aaKnown RBP eCLIP22.75■■□□□ 1.23
PKP3-207ENST00000530695 ARHGAP27Q6ZUM4 889 aa22.75■■□□□ 1.23
PKP3-207ENST00000530695 PIM2Q9P1W9 311 aa22.75■■□□□ 1.23
PKP3-207ENST00000530695 CEMIPQ8WUJ3 1361 aa22.75■■□□□ 1.23
PKP3-207ENST00000530695 HEG1Q9ULI3 1381 aa22.75■■□□□ 1.23
PKP3-207ENST00000530695 CEP350Q5VT06 3117 aa22.74■■□□□ 1.23
PKP3-207ENST00000530695 NFIXQ14938 502 aa22.73■■□□□ 1.23
PKP3-207ENST00000530695 TEX13AQ9BXU3 409 aaPredicted RBP22.73■■□□□ 1.23
PKP3-207ENST00000530695 FMNL2Q96PY5 1086 aa22.72■■□□□ 1.23
PKP3-207ENST00000530695 BTBD11A6QL63 1104 aa22.71■■□□□ 1.23
PKP3-207ENST00000530695 CHRNA5P30532 468 aa22.71■■□□□ 1.23
PKP3-207ENST00000530695 EIF5P55010 431 aaKnown RBP22.71■■□□□ 1.23
PKP3-207ENST00000530695 DALRD3Q5D0E6 543 aaKnown RBP22.71■■□□□ 1.23
PKP3-207ENST00000530695 BCL2L12Q9HB09 334 aa22.71■■□□□ 1.23
PKP3-207ENST00000530695 SCN7AQ01118 1682 aa22.71■■□□□ 1.23
PKP3-207ENST00000530695 DLEC1Q9Y238 1755 aa22.71■■□□□ 1.23
PKP3-207ENST00000530695 A0A087WZG4 1122 aa22.7■■□□□ 1.22
PKP3-207ENST00000530695 SBF1O95248 1867 aa22.7■■□□□ 1.22
PKP3-207ENST00000530695 DLG5Q8TDM6 1919 aa22.7■■□□□ 1.22
PKP3-207ENST00000530695 RTF1Q92541 710 aaKnown RBP22.69■■□□□ 1.22
PKP3-207ENST00000530695 KCNQ3O43525 872 aa22.68■■□□□ 1.22
PKP3-207ENST00000530695 ZNF330Q9Y3S2 320 aaPredicted RBP22.68■■□□□ 1.22
PKP3-207ENST00000530695 SERPINB2P05120 415 aa22.67■■□□□ 1.22
PKP3-207ENST00000530695 MCM10Q7L590 875 aa22.67■■□□□ 1.22
PKP3-207ENST00000530695 BICDL1Q6ZP65 573 aa22.66■■□□□ 1.22
PKP3-207ENST00000530695 ANKRD31Q8N7Z5 1873 aa22.65■■□□□ 1.22
PKP3-207ENST00000530695 A1BGP04217 495 aa22.65■■□□□ 1.22
PKP3-207ENST00000530695 IL6STP40189 918 aaPredicted RBP22.65■■□□□ 1.22
PKP3-207ENST00000530695 TBC1D2BQ9UPU7 963 aa22.65■■□□□ 1.22
PKP3-207ENST00000530695 BCORQ6W2J9 1755 aa22.65■■□□□ 1.22
PKP3-207ENST00000530695 NPM2Q86SE8 214 aaKnown RBP22.64■■□□□ 1.21
PKP3-207ENST00000530695 CCDC88AQ3V6T2 1871 aa22.63■■□□□ 1.21
PKP3-207ENST00000530695 DCTN1Q14203 1278 aa22.63■■□□□ 1.21
PKP3-207ENST00000530695 C9orf131Q5VYM1 1079 aa22.63■■□□□ 1.21
PKP3-207ENST00000530695 TBC1D9BQ66K14 1250 aa22.63■■□□□ 1.21
PKP3-207ENST00000530695 KIF3CO14782 793 aa22.62■■□□□ 1.21
PKP3-207ENST00000530695 HTATSF1O43719 755 aaKnown RBP22.62■■□□□ 1.21
PKP3-207ENST00000530695 CARMIL3Q8ND23 1372 aa22.62■■□□□ 1.21
PKP3-207ENST00000530695 USP16Q9Y5T5 823 aa22.61■■□□□ 1.21
PKP3-207ENST00000530695 NEFMP07197 916 aa22.6■■□□□ 1.21
PKP3-207ENST00000530695 SNRPA1P09661 255 aaKnown RBP22.6■■□□□ 1.21
PKP3-207ENST00000530695 C2CD5Q86YS7 1000 aa22.6■■□□□ 1.21
PKP3-207ENST00000530695 PRAMEF22A3QJZ6 481 aa22.59■■□□□ 1.21
PKP3-207ENST00000530695 H0YIN7 160 aa22.59■■□□□ 1.21
PKP3-207ENST00000530695 RNF181Q9P0P0 153 aa22.59■■□□□ 1.21
PKP3-207ENST00000530695 CAMTA2O94983 1202 aa22.58■■□□□ 1.21
PKP3-207ENST00000530695 PIP4K2AP48426 406 aaPredicted RBP22.58■■□□□ 1.21
PKP3-207ENST00000530695 TTLL6Q8N841 843 aa22.58■■□□□ 1.21
PKP3-207ENST00000530695 LAMB4A4D0S4 1761 aa22.58■■□□□ 1.2
PKP3-207ENST00000530695 CACNA1SQ13698 1873 aa22.58■■□□□ 1.2
PKP3-207ENST00000530695 COL11A2P13942 1736 aaPredicted RBP22.57■■□□□ 1.2
PKP3-207ENST00000530695 TAF7Q15545 349 aaPredicted RBP22.57■■□□□ 1.2
PKP3-207ENST00000530695 DZIP3Q86Y13 1208 aaKnown RBP22.57■■□□□ 1.2
PKP3-207ENST00000530695 KDM3BQ7LBC6 1761 aa22.57■■□□□ 1.2
PKP3-207ENST00000530695 HSPA6P17066 643 aa22.56■■□□□ 1.2
PKP3-207ENST00000530695 SETDB2Q96T68 719 aa22.56■■□□□ 1.2
PKP3-207ENST00000530695 NMRK2Q9NPI5 230 aa22.56■■□□□ 1.2
PKP3-207ENST00000530695 PRR5LQ6MZQ0 368 aa22.55■■□□□ 1.2
PKP3-207ENST00000530695 BRIP1Q9BX63 1249 aa22.55■■□□□ 1.2
PKP3-207ENST00000530695 PDE6BP35913 854 aa22.54■■□□□ 1.2
PKP3-207ENST00000530695 RASSF7Q02833 373 aa22.54■■□□□ 1.2
PKP3-207ENST00000530695 CCDC24Q8N4L8 307 aa22.54■■□□□ 1.2
PKP3-207ENST00000530695 PLEKHF1Q96S99 279 aa22.54■■□□□ 1.2
PKP3-207ENST00000530695 MIS18AQ9NYP9 233 aa22.54■■□□□ 1.2
PKP3-207ENST00000530695 PDZRN3Q9UPQ7 1066 aa22.54■■□□□ 1.2
PKP3-207ENST00000530695 TNRC6CQ9HCJ0 1690 aaKnown RBP22.53■■□□□ 1.2
PKP3-207ENST00000530695 NPHP1O15259 732 aa22.53■■□□□ 1.2
PKP3-207ENST00000530695 CNBD1Q8NA66 436 aa22.53■■□□□ 1.2
PKP3-207ENST00000530695 TOMM70O94826 608 aa22.52■■□□□ 1.2
PKP3-207ENST00000530695 ZNF622Q969S3 477 aaKnown RBP eCLIP22.52■■□□□ 1.2
PKP3-207ENST00000530695 PNNQ9H307 717 aaKnown RBP22.52■■□□□ 1.2
PKP3-207ENST00000530695 KDM2BQ8NHM5 1336 aa22.52■■□□□ 1.2
PKP3-207ENST00000530695 FER1L6Q2WGJ9 1857 aa22.51■■□□□ 1.19
PKP3-207ENST00000530695 TIAM2Q8IVF5 1701 aa22.51■■□□□ 1.19
PKP3-207ENST00000530695 NFE2L2Q16236 605 aa22.51■■□□□ 1.19
PKP3-207ENST00000530695 ZNF652Q9Y2D9 606 aa22.51■■□□□ 1.19
PKP3-207ENST00000530695 MAPK8IP3Q9UPT6 1336 aa22.51■■□□□ 1.19
PKP3-207ENST00000530695 ARFGEF2Q9Y6D5 1785 aa22.5■■□□□ 1.19
PKP3-207ENST00000530695 NBPF26B4DH59 902 aa22.5■■□□□ 1.19
PKP3-207ENST00000530695 LMNB1P20700 586 aa22.5■■□□□ 1.19
PKP3-207ENST00000530695 ST5P78524 1137 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms