RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TNNQ9UQP3 1299 aa13.67□□□□□ -0.22
SOX6-213ENST00000530378 USP16Q9Y5T5 823 aa13.67□□□□□ -0.22
SOX6-213ENST00000530378 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
SOX6-213ENST00000530378 PROSER3Q2NL68 480 aa13.67□□□□□ -0.22
SOX6-213ENST00000530378 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
SOX6-213ENST00000530378 LOC102724428A0A0B4J2F2 783 aa13.66□□□□□ -0.22
SOX6-213ENST00000530378 ATP6V1AP38606 617 aa13.66□□□□□ -0.22
SOX6-213ENST00000530378 SIK1P57059 783 aa13.66□□□□□ -0.22
SOX6-213ENST00000530378 SRCAPQ6ZRS2 3230 aa13.66□□□□□ -0.22
SOX6-213ENST00000530378 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
SOX6-213ENST00000530378 COL5A3P25940 1745 aaPredicted RBP13.65□□□□□ -0.22
SOX6-213ENST00000530378 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
SOX6-213ENST00000530378 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
SOX6-213ENST00000530378 MYL6BP14649 208 aa13.65□□□□□ -0.22
SOX6-213ENST00000530378 CCDC30Q5VVM6 783 aa13.65□□□□□ -0.22
SOX6-213ENST00000530378 G2E3Q7L622 706 aa13.65□□□□□ -0.22
SOX6-213ENST00000530378 STK31Q9BXU1 1019 aa13.65□□□□□ -0.22
SOX6-213ENST00000530378 ITPK1Q13572 414 aa13.64□□□□□ -0.23
SOX6-213ENST00000530378 SMARCC1Q92922 1105 aaPredicted RBP13.64□□□□□ -0.23
SOX6-213ENST00000530378 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
SOX6-213ENST00000530378 ZNF330Q9Y3S2 320 aaPredicted RBP13.64□□□□□ -0.23
SOX6-213ENST00000530378 MYH14Q7Z406 1995 aaKnown RBP13.64□□□□□ -0.23
SOX6-213ENST00000530378 TAF1LQ8IZX4 1826 aa13.64□□□□□ -0.23
SOX6-213ENST00000530378 A1BGP04217 495 aa13.64□□□□□ -0.23
SOX6-213ENST00000530378 HOXB7P09629 217 aa13.64□□□□□ -0.23
SOX6-213ENST00000530378 ALDH1L2Q3SY69 923 aa13.64□□□□□ -0.23
SOX6-213ENST00000530378 C20orf194Q5TEA3 1177 aa13.64□□□□□ -0.23
SOX6-213ENST00000530378 CLUAP1Q96AJ1 413 aa13.64□□□□□ -0.23
SOX6-213ENST00000530378 PHAXQ9H814 394 aaKnown RBP13.63□□□□□ -0.23
SOX6-213ENST00000530378 CCNL1Q9UK58 526 aaPredicted RBP13.63□□□□□ -0.23
SOX6-213ENST00000530378 APBA3O96018 575 aa13.62□□□□□ -0.23
SOX6-213ENST00000530378 AIMP1Q12904 312 aaKnown RBP13.62□□□□□ -0.23
SOX6-213ENST00000530378 LINC00116Q8NCU8 138 aa13.62□□□□□ -0.23
SOX6-213ENST00000530378 ZNF428Q96B54 188 aa13.62□□□□□ -0.23
SOX6-213ENST00000530378 CICQ96RK0 1608 aaPredicted RBP13.62□□□□□ -0.23
SOX6-213ENST00000530378 SOS1Q07889 1333 aaPredicted RBP13.61□□□□□ -0.23
SOX6-213ENST00000530378 KIF16BQ96L93 1317 aa13.61□□□□□ -0.23
SOX6-213ENST00000530378 NBPF26B4DH59 902 aa13.61□□□□□ -0.23
SOX6-213ENST00000530378 PDIA6Q15084 440 aa13.61□□□□□ -0.23
SOX6-213ENST00000530378 NBPF14Q5TI25 921 aa13.61□□□□□ -0.23
SOX6-213ENST00000530378 NBPF10Q6P3W6 841 aaKnown RBP13.61□□□□□ -0.23
SOX6-213ENST00000530378 VSIG10Q8N0Z9 540 aa13.61□□□□□ -0.23
SOX6-213ENST00000530378 NBPF15Q8N660 670 aa13.61□□□□□ -0.23
SOX6-213ENST00000530378 PANK1Q8TE04 598 aa13.61□□□□□ -0.23
SOX6-213ENST00000530378 ZNF831Q5JPB2 1677 aa13.6□□□□□ -0.23
SOX6-213ENST00000530378 CYP19A1P11511 503 aaPredicted RBP13.6□□□□□ -0.23
SOX6-213ENST00000530378 FLIIQ13045 1269 aa13.6□□□□□ -0.23
SOX6-213ENST00000530378 DBF4Q9UBU7 674 aaPredicted RBP13.6□□□□□ -0.23
SOX6-213ENST00000530378 ZBTB1Q9Y2K1 713 aa13.6□□□□□ -0.23
SOX6-213ENST00000530378 RNF123Q5XPI4 1314 aa13.6□□□□□ -0.23
SOX6-213ENST00000530378 F6X3S4 739 aa13.6□□□□□ -0.23
SOX6-213ENST00000530378 STARD3NLO95772 234 aa13.6□□□□□ -0.23
SOX6-213ENST00000530378 RLBP1P12271 317 aa13.6□□□□□ -0.23
SOX6-213ENST00000530378 TRIM27P14373 513 aa13.6□□□□□ -0.23
SOX6-213ENST00000530378 FKBP5Q13451 457 aaPredicted RBP13.6□□□□□ -0.23
SOX6-213ENST00000530378 ZKSCAN2Q63HK3 967 aa13.6□□□□□ -0.23
SOX6-213ENST00000530378 SMIM5Q71RC9 77 aa13.6□□□□□ -0.23
SOX6-213ENST00000530378 ARXQ96QS3 562 aa13.6□□□□□ -0.23
SOX6-213ENST00000530378 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
SOX6-213ENST00000530378 NEFLP07196 543 aa13.59□□□□□ -0.23
SOX6-213ENST00000530378 CRKLP46109 303 aaKnown RBP13.59□□□□□ -0.23
SOX6-213ENST00000530378 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.59□□□□□ -0.23
SOX6-213ENST00000530378 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
SOX6-213ENST00000530378 LRRC4BQ9NT99 713 aa13.59□□□□□ -0.23
SOX6-213ENST00000530378 RREB1Q92766 1687 aa13.58□□□□□ -0.24
SOX6-213ENST00000530378 FKBP8Q14318 412 aa13.58□□□□□ -0.24
SOX6-213ENST00000530378 ATF7IPQ6VMQ6 1270 aa13.58□□□□□ -0.24
SOX6-213ENST00000530378 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
SOX6-213ENST00000530378 XAGE3Q8WTP9 111 aa13.58□□□□□ -0.24
SOX6-213ENST00000530378 TEX13AQ9BXU3 409 aaPredicted RBP13.58□□□□□ -0.24
SOX6-213ENST00000530378 ARFGEF2Q9Y6D5 1785 aa13.58□□□□□ -0.24
SOX6-213ENST00000530378 CCDC87Q9NVE4 849 aa13.57□□□□□ -0.24
SOX6-213ENST00000530378 EN1Q05925 392 aaPredicted RBP13.57□□□□□ -0.24
SOX6-213ENST00000530378 TXNRD1Q16881 649 aa13.57□□□□□ -0.24
SOX6-213ENST00000530378 INTS5Q6P9B9 1019 aaKnown RBP13.57□□□□□ -0.24
SOX6-213ENST00000530378 SLC4A10Q6U841 1118 aa13.57□□□□□ -0.24
SOX6-213ENST00000530378 TTLL7Q6ZT98 887 aa13.57□□□□□ -0.24
SOX6-213ENST00000530378 COPS6Q7L5N1 327 aa13.57□□□□□ -0.24
SOX6-213ENST00000530378 HYPKQ9NX55 129 aa13.57□□□□□ -0.24
SOX6-213ENST00000530378 NUP188Q5SRE5 1749 aa13.57□□□□□ -0.24
SOX6-213ENST00000530378 LRP10Q7Z4F1 713 aa13.56□□□□□ -0.24
SOX6-213ENST00000530378 DEFB132Q7Z7B7 95 aa13.56□□□□□ -0.24
SOX6-213ENST00000530378 PROM2Q8N271 834 aa13.56□□□□□ -0.24
SOX6-213ENST00000530378 CRBNQ96SW2 442 aa13.56□□□□□ -0.24
SOX6-213ENST00000530378 COG6Q9Y2V7 657 aa13.56□□□□□ -0.24
SOX6-213ENST00000530378 RGPD3A6NKT7 1758 aaPredicted RBP13.55□□□□□ -0.24
SOX6-213ENST00000530378 RGPD4Q7Z3J3 1758 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 GNPATO15228 680 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
SOX6-213ENST00000530378 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
SOX6-213ENST00000530378 DZIP1LQ8IYY4 767 aaKnown RBP13.55□□□□□ -0.24
SOX6-213ENST00000530378 ADCY9O60503 1353 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
SOX6-213ENST00000530378 TUBGCP6Q96RT7 1819 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 PI4KAP2A4QPH2 592 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 PHF14O94880 888 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 SF3B2Q13435 895 aaKnown RBP13.55□□□□□ -0.24
SOX6-213ENST00000530378 EZH2Q15910 746 aaKnown RBP13.55□□□□□ -0.24
SOX6-213ENST00000530378 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
SOX6-213ENST00000530378 ITPRIPQ8IWB1 547 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms