RNA–Protein interactions for RNA: ENST00000529919.5

CTNND1-222, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 4,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-222ENST00000529919 THUMPD2Q9BTF0 503 aaKnown RBP9.33□□□□□ -0.92
CTNND1-222ENST00000529919 IBSPP21815 317 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-222ENST00000529919 CCDC158Q5M9N0 1113 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 PDRG1Q9NUG6 133 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 USP25Q9UHP3 1055 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 TTC21BQ7Z4L5 1316 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 RPGRQ92834 1020 aaKnown RBP9.32□□□□□ -0.92
CTNND1-222ENST00000529919 ZSCAN31Q96LW9 406 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-222ENST00000529919 ORAI2Q96SN7 254 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 ZMYND15Q9H091 742 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 CCT4P50991 539 aaKnown RBP9.32□□□□□ -0.92
CTNND1-222ENST00000529919 DYDC1Q8WWB3 177 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 DDX11Q96FC9 970 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 GBP3Q9H0R5 595 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 TFCP2L1Q9NZI6 479 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 CALCOCO1Q9P1Z2 691 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 POLR3GO15318 223 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-222ENST00000529919 POLD1P28340 1107 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 IQCEQ6IPM2 695 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 WDR63Q8IWG1 891 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 ZNF622Q969S3 477 aaKnown RBP eCLIP9.32□□□□□ -0.923e-7■□□□□ 10.1
CTNND1-222ENST00000529919 CEP126Q9P2H0 1117 aa9.32□□□□□ -0.92
CTNND1-222ENST00000529919 TTC21AQ8NDW8 1320 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 MAP3K1Q13233 1512 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 C16orf45Q96MC5 204 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-222ENST00000529919 TMOD2Q9NZR1 351 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 SMTNL1A8MU46 457 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 SRGAP3O43295 1099 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 GCP02774 474 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 TXLNBQ8N3L3 684 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 TEX13AQ9BXU3 409 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-222ENST00000529919 INCENPQ9NQS7 918 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 EIF5P55010 431 aaKnown RBP9.31□□□□□ -0.92
CTNND1-222ENST00000529919 ATP2B2Q01814 1243 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 GIMAP7Q8NHV1 300 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 TRMT112Q9UI30 125 aaKnown RBP9.31□□□□□ -0.92
CTNND1-222ENST00000529919 TNNT1P13805 278 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 GPTP24298 496 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 SMARCC1Q92922 1105 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-222ENST00000529919 WWC3Q9ULE0 1092 aa9.31□□□□□ -0.92
CTNND1-222ENST00000529919 IL2RBP14784 551 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 KIF4BQ2VIQ3 1234 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 TTC39AQ5SRH9 613 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 KIAA1328Q86T90 577 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 NUP133Q8WUM0 1156 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 TBC1D2Q9BYX2 928 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 ANKIB1Q9P2G1 1089 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 FBLN1P23142 703 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 TMPOP42166 694 aaKnown RBP9.3□□□□□ -0.92
CTNND1-222ENST00000529919 USP21Q9UK80 565 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 DISP1Q96F81 1524 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 SHTN1A0MZ66 631 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
CTNND1-222ENST00000529919 GTF2F1P35269 517 aaKnown RBP eCLIP9.3□□□□□ -0.925e-6■■■□□ 17.8
CTNND1-222ENST00000529919 PAF1Q8N7H5 531 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 TRMT1Q9NXH9 659 aaKnown RBP9.3□□□□□ -0.92
CTNND1-222ENST00000529919 EXOC6BQ9Y2D4 811 aa9.3□□□□□ -0.92
CTNND1-222ENST00000529919 EZRP15311 586 aaKnown RBP9.29□□□□□ -0.92
CTNND1-222ENST00000529919 SSFA2P28290 1259 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 RPAP2Q8IXW5 612 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-222ENST00000529919 IPO4Q8TEX9 1081 aaKnown RBP9.29□□□□□ -0.92
CTNND1-222ENST00000529919 ZBTB3Q9H5J0 574 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 SSBP05455 408 aaKnown RBP eCLIP9.29□□□□□ -0.921e-7■■■■■ 26.8
CTNND1-222ENST00000529919 CASTP20810 708 aaKnown RBP9.29□□□□□ -0.92
CTNND1-222ENST00000529919 ATP6V1AP38606 617 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 JAKMIP3Q5VZ66 844 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 DUSP27Q5VZP5 1158 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 CCDC83Q8IWF9 413 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 TNPO1Q92973 898 aaKnown RBP9.29□□□□□ -0.92
CTNND1-222ENST00000529919 NEO1Q92859 1461 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 C6orf229H3BNL8 230 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 ZSCAN12O43309 604 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 WDHD1O75717 1129 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-222ENST00000529919 CCDC183Q5T5S1 534 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 AACSQ86V21 672 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 TMEM57Q8N5G2 664 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 SLC3A2P08195 630 aaKnown RBP9.29□□□□□ -0.92
CTNND1-222ENST00000529919 KRT32Q14532 448 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 NACAP1Q9BZK3 213 aa9.29□□□□□ -0.92
CTNND1-222ENST00000529919 SCAND2PQ9GZW5 306 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-222ENST00000529919 LARP1Q6PKG0 1096 aaKnown RBP9.28□□□□□ -0.92
CTNND1-222ENST00000529919 ANKRD18AQ8IVF6 992 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 TAF4BQ92750 862 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.28□□□□□ -0.921e-7■■■□□ 16.3
CTNND1-222ENST00000529919 NOL7Q9UMY1 257 aaKnown RBP9.28□□□□□ -0.92
CTNND1-222ENST00000529919 SCAF11Q99590 1463 aaKnown RBP9.28□□□□□ -0.92
CTNND1-222ENST00000529919 CCDC69A6NI79 296 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 C20orf194Q5TEA3 1177 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 CCDC148Q8NFR7 591 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 ANO10Q9NW15 660 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 SPDYE4A6NLX3 237 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 FKBP4Q02790 459 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTNND1-222ENST00000529919 TTLL12Q14166 644 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-222ENST00000529919 FAM98CQ17RN3 349 aaKnown RBP9.28□□□□□ -0.92
CTNND1-222ENST00000529919 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 CKAP2LQ8IYA6 745 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 CLIP2Q9UDT6 1046 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 CDKL5O76039 1030 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 GDPD2Q9HCC8 539 aa9.28□□□□□ -0.92
CTNND1-222ENST00000529919 GOLGA6L10A0A0M3HER8 536 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms