RNA–Protein interactions for RNA: ENST00000529673.5

SNX15-206, Transcript of sorting nexin 15, humanhuman

TSL 3

Gene SNX15, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-206ENST00000529673 GLTPD2A6NH11 291 aa18.31■□□□□ 0.52
SNX15-206ENST00000529673 PTCD1O75127 700 aaKnown RBP18.31■□□□□ 0.52
SNX15-206ENST00000529673 COL5A3P25940 1745 aaPredicted RBP18.3■□□□□ 0.52
SNX15-206ENST00000529673 COL3A1P02461 1466 aaPredicted RBP18.29■□□□□ 0.52
SNX15-206ENST00000529673 LMNB1P20700 586 aa18.29■□□□□ 0.52
SNX15-206ENST00000529673 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
SNX15-206ENST00000529673 SCN11AQ9UI33 1791 aa18.29■□□□□ 0.52
SNX15-206ENST00000529673 NPC1L1Q9UHC9 1359 aa18.29■□□□□ 0.52
SNX15-206ENST00000529673 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
SNX15-206ENST00000529673 CHRNA5P30532 468 aa18.28■□□□□ 0.52
SNX15-206ENST00000529673 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
SNX15-206ENST00000529673 AKAP4Q5JQC9 854 aa18.28■□□□□ 0.52
SNX15-206ENST00000529673 RASSF7Q02833 373 aa18.27■□□□□ 0.52
SNX15-206ENST00000529673 PRDM10Q9NQV6 1147 aa18.27■□□□□ 0.52
SNX15-206ENST00000529673 DDR1Q08345 913 aa18.26■□□□□ 0.51
SNX15-206ENST00000529673 CREBZFQ9NS37 354 aa18.26■□□□□ 0.51
SNX15-206ENST00000529673 USP42Q9H9J4 1324 aaKnown RBP18.25■□□□□ 0.51
SNX15-206ENST00000529673 RNMTO43148 476 aaKnown RBP18.25■□□□□ 0.51
SNX15-206ENST00000529673 SLC52A2Q9HAB3 445 aa18.25■□□□□ 0.51
SNX15-206ENST00000529673 SLC39A6Q13433 755 aa18.24■□□□□ 0.51
SNX15-206ENST00000529673 FKBP8Q14318 412 aa18.24■□□□□ 0.51
SNX15-206ENST00000529673 PCDH10Q9P2E7 1040 aa18.24■□□□□ 0.51
SNX15-206ENST00000529673 TJP1Q07157 1748 aa18.23■□□□□ 0.51
SNX15-206ENST00000529673 TIAM2Q8IVF5 1701 aa18.23■□□□□ 0.51
SNX15-206ENST00000529673 VIRMAQ69YN4 1812 aaKnown RBP18.23■□□□□ 0.51
SNX15-206ENST00000529673 MYH14Q7Z406 1995 aaKnown RBP18.23■□□□□ 0.51
SNX15-206ENST00000529673 MKRN1Q9UHC7 482 aaKnown RBP18.23■□□□□ 0.51
SNX15-206ENST00000529673 POLRMTO00411 1230 aaKnown RBP18.22■□□□□ 0.51
SNX15-206ENST00000529673 FOXN1O15353 648 aa18.22■□□□□ 0.51
SNX15-206ENST00000529673 CRKLP46109 303 aaKnown RBP18.22■□□□□ 0.51
SNX15-206ENST00000529673 SRP68Q9UHB9 627 aaKnown RBP18.22■□□□□ 0.51
SNX15-206ENST00000529673 MRC1P22897 1456 aa18.21■□□□□ 0.51
SNX15-206ENST00000529673 DPY19L2Q6NUT2 758 aa18.21■□□□□ 0.51
SNX15-206ENST00000529673 DNAJC10Q8IXB1 793 aa18.21■□□□□ 0.51
SNX15-206ENST00000529673 AIDAQ96BJ3 306 aa18.21■□□□□ 0.51
SNX15-206ENST00000529673 CTCFP49711 727 aaPredicted RBP18.2■□□□□ 0.5
SNX15-206ENST00000529673 CNTNAP1P78357 1384 aa18.19■□□□□ 0.5
SNX15-206ENST00000529673 PPP2R1AP30153 589 aa18.19■□□□□ 0.5
SNX15-206ENST00000529673 CHADLQ6NUI6 762 aa18.19■□□□□ 0.5
SNX15-206ENST00000529673 CFAP53Q96M91 514 aa18.19■□□□□ 0.5
SNX15-206ENST00000529673 ADAMTS7Q9UKP4 1686 aa18.18■□□□□ 0.5
SNX15-206ENST00000529673 POTECB2RU33 542 aa18.18■□□□□ 0.5
SNX15-206ENST00000529673 TM4SF1P30408 202 aa18.18■□□□□ 0.5
SNX15-206ENST00000529673 TTLL6Q8N841 843 aa18.18■□□□□ 0.5
SNX15-206ENST00000529673 PRKAR2BP31323 418 aa18.17■□□□□ 0.5
SNX15-206ENST00000529673 INTS5Q6P9B9 1019 aaKnown RBP18.17■□□□□ 0.5
SNX15-206ENST00000529673 PHACTR3Q96KR7 559 aa18.17■□□□□ 0.5
SNX15-206ENST00000529673 DLEC1Q9Y238 1755 aa18.17■□□□□ 0.5
SNX15-206ENST00000529673 ZPR1O75312 459 aa18.16■□□□□ 0.5
SNX15-206ENST00000529673 FAM161AQ3B820 660 aa18.16■□□□□ 0.5
SNX15-206ENST00000529673 RSPH6AQ9H0K4 717 aa18.16■□□□□ 0.5
SNX15-206ENST00000529673 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
SNX15-206ENST00000529673 NFKBIEO00221 500 aa18.15■□□□□ 0.5
SNX15-206ENST00000529673 IL17REQ8NFR9 667 aa18.15■□□□□ 0.5
SNX15-206ENST00000529673 GAS2L2Q8NHY3 880 aa18.15■□□□□ 0.5
SNX15-206ENST00000529673 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
SNX15-206ENST00000529673 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNX15-206ENST00000529673 CYP19A1P11511 503 aaPredicted RBP18.13■□□□□ 0.49
SNX15-206ENST00000529673 TEFQ10587 303 aa18.13■□□□□ 0.49
SNX15-206ENST00000529673 USPL1Q5W0Q7 1092 aa18.13■□□□□ 0.49
SNX15-206ENST00000529673 ABHD8Q96I13 439 aa18.13■□□□□ 0.49
SNX15-206ENST00000529673 NUDCQ9Y266 331 aa18.13■□□□□ 0.49
SNX15-206ENST00000529673 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
SNX15-206ENST00000529673 ERFEQ4G0M1 354 aa18.12■□□□□ 0.49
SNX15-206ENST00000529673 C2CD5Q86YS7 1000 aa18.12■□□□□ 0.49
SNX15-206ENST00000529673 TTC5Q8N0Z6 440 aa18.12■□□□□ 0.49
SNX15-206ENST00000529673 ZBTB1Q9Y2K1 713 aa18.12■□□□□ 0.49
SNX15-206ENST00000529673 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
SNX15-206ENST00000529673 CCDC88AQ3V6T2 1871 aa18.12■□□□□ 0.49
SNX15-206ENST00000529673 H0YIN7 160 aa18.11■□□□□ 0.49
SNX15-206ENST00000529673 LBX1P52954 281 aa18.11■□□□□ 0.49
SNX15-206ENST00000529673 NFIXQ14938 502 aa18.11■□□□□ 0.49
SNX15-206ENST00000529673 WBP1LQ9NX94 342 aa18.11■□□□□ 0.49
SNX15-206ENST00000529673 SOS1Q07889 1333 aaPredicted RBP18.11■□□□□ 0.49
SNX15-206ENST00000529673 AFDNP55196 1824 aaKnown RBP18.1■□□□□ 0.49
SNX15-206ENST00000529673 PASKQ96RG2 1323 aa18.1■□□□□ 0.49
SNX15-206ENST00000529673 ZNF496Q96IT1 587 aaPredicted RBP18.1■□□□□ 0.49
SNX15-206ENST00000529673 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
SNX15-206ENST00000529673 COL15A1P39059 1388 aa18.09■□□□□ 0.49
SNX15-206ENST00000529673 IQCA1LA6NCM1 817 aa18.09■□□□□ 0.49
SNX15-206ENST00000529673 KCNQ3O43525 872 aa18.09■□□□□ 0.49
SNX15-206ENST00000529673 SERPINB2P05120 415 aa18.09■□□□□ 0.49
SNX15-206ENST00000529673 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
SNX15-206ENST00000529673 VEGFBP49765 207 aa18.09■□□□□ 0.49
SNX15-206ENST00000529673 NARFQ9UHQ1 456 aa18.09■□□□□ 0.49
SNX15-206ENST00000529673 TMEM88BA6NKF7 163 aa18.08■□□□□ 0.48
SNX15-206ENST00000529673 POTEIP0CG38 1075 aa18.08■□□□□ 0.48
SNX15-206ENST00000529673 POTEJP0CG39 1038 aa18.08■□□□□ 0.48
SNX15-206ENST00000529673 MLLT1Q03111 559 aaPredicted RBP18.08■□□□□ 0.48
SNX15-206ENST00000529673 ZNF790Q6PG37 636 aa18.08■□□□□ 0.48
SNX15-206ENST00000529673 LDHDQ86WU2 507 aa18.08■□□□□ 0.48
SNX15-206ENST00000529673 PDZRN3Q9UPQ7 1066 aa18.08■□□□□ 0.48
SNX15-206ENST00000529673 DICER1Q9UPY3 1922 aaKnown RBP18.08■□□□□ 0.48
SNX15-206ENST00000529673 CEMIPQ8WUJ3 1361 aa18.07■□□□□ 0.48
SNX15-206ENST00000529673 LTBP3Q9NS15 1303 aa18.07■□□□□ 0.48
SNX15-206ENST00000529673 DCTN1Q14203 1278 aa18.07■□□□□ 0.48
SNX15-206ENST00000529673 MCM10Q7L590 875 aa18.07■□□□□ 0.48
SNX15-206ENST00000529673 VSIG10Q8N0Z9 540 aa18.07■□□□□ 0.48
SNX15-206ENST00000529673 HEG1Q9ULI3 1381 aa18.06■□□□□ 0.48
SNX15-206ENST00000529673 BTBD11A6QL63 1104 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms