RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 EVX2Q03828 476 aa12.39□□□□□ -0.43
VPS11-203ENST00000529545 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
VPS11-203ENST00000529545 SLC4A9Q96Q91 983 aa12.39□□□□□ -0.43
VPS11-203ENST00000529545 RNF181Q9P0P0 153 aa12.39□□□□□ -0.43
VPS11-203ENST00000529545 BRCA1P38398 1863 aaKnown RBP12.39□□□□□ -0.43
VPS11-203ENST00000529545 COL5A3P25940 1745 aaPredicted RBP12.39□□□□□ -0.43
VPS11-203ENST00000529545 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
VPS11-203ENST00000529545 TNNT2P45379 298 aaPredicted RBP12.38□□□□□ -0.43
VPS11-203ENST00000529545 AMOTQ4VCS5 1084 aa12.38□□□□□ -0.43
VPS11-203ENST00000529545 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
VPS11-203ENST00000529545 KCNA3P22001 575 aa12.37□□□□□ -0.43
VPS11-203ENST00000529545 MTHFSP49914 203 aa12.37□□□□□ -0.43
VPS11-203ENST00000529545 C1orf141Q5JVX7 400 aa12.37□□□□□ -0.43
VPS11-203ENST00000529545 ZNF530Q6P9A1 599 aaPredicted RBP12.37□□□□□ -0.43
VPS11-203ENST00000529545 JMYQ8N9B5 988 aa12.37□□□□□ -0.43
VPS11-203ENST00000529545 RRAGCQ9HB90 399 aa12.37□□□□□ -0.43
VPS11-203ENST00000529545 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
VPS11-203ENST00000529545 CRKLP46109 303 aaKnown RBP12.36□□□□□ -0.43
VPS11-203ENST00000529545 HTRA3P83110 453 aa12.36□□□□□ -0.43
VPS11-203ENST00000529545 SMC1BQ8NDV3 1235 aa12.36□□□□□ -0.43
VPS11-203ENST00000529545 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
VPS11-203ENST00000529545 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
VPS11-203ENST00000529545 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
VPS11-203ENST00000529545 USP42Q9H9J4 1324 aaKnown RBP12.35□□□□□ -0.43
VPS11-203ENST00000529545 MYH14Q7Z406 1995 aaKnown RBP12.34□□□□□ -0.43
VPS11-203ENST00000529545 ZPR1O75312 459 aa12.34□□□□□ -0.43
VPS11-203ENST00000529545 CHRNA5P30532 468 aa12.34□□□□□ -0.43
VPS11-203ENST00000529545 COL13A1Q5TAT6 717 aaPredicted RBP12.34□□□□□ -0.43
VPS11-203ENST00000529545 TNS4Q8IZW8 715 aa12.34□□□□□ -0.43
VPS11-203ENST00000529545 ZC3H4Q9UPT8 1303 aaKnown RBP12.34□□□□□ -0.43
VPS11-203ENST00000529545 DDR1Q08345 913 aa12.33□□□□□ -0.44
VPS11-203ENST00000529545 NFATC2IPQ8NCF5 419 aa12.33□□□□□ -0.44
VPS11-203ENST00000529545 KDM6AO15550 1401 aaPredicted RBP12.33□□□□□ -0.44
VPS11-203ENST00000529545 SBF1O95248 1867 aa12.32□□□□□ -0.44
VPS11-203ENST00000529545 POLRMTO00411 1230 aaKnown RBP12.31□□□□□ -0.44
VPS11-203ENST00000529545 VEGFAP15692 232 aaPredicted RBP12.31□□□□□ -0.44
VPS11-203ENST00000529545 LMNB1P20700 586 aa12.31□□□□□ -0.44
VPS11-203ENST00000529545 TM4SF1P30408 202 aa12.31□□□□□ -0.44
VPS11-203ENST00000529545 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
VPS11-203ENST00000529545 CLCN6P51797 869 aa12.3□□□□□ -0.44
VPS11-203ENST00000529545 USPL1Q5W0Q7 1092 aa12.3□□□□□ -0.44
VPS11-203ENST00000529545 TJP1Q07157 1748 aa12.29□□□□□ -0.44
VPS11-203ENST00000529545 GLTPD2A6NH11 291 aa12.29□□□□□ -0.44
VPS11-203ENST00000529545 PRELPP51888 382 aa12.29□□□□□ -0.44
VPS11-203ENST00000529545 INTS5Q6P9B9 1019 aaKnown RBP12.29□□□□□ -0.44
VPS11-203ENST00000529545 TTLL6Q8N841 843 aa12.29□□□□□ -0.44
VPS11-203ENST00000529545 FBXO3Q9UK99 471 aa12.29□□□□□ -0.44
VPS11-203ENST00000529545 RASSF7Q02833 373 aa12.28□□□□□ -0.44
VPS11-203ENST00000529545 SULT6B1Q6IMI4 303 aa12.28□□□□□ -0.44
VPS11-203ENST00000529545 MORC1Q86VD1 984 aa12.28□□□□□ -0.44
VPS11-203ENST00000529545 AEBP1Q8IUX7 1158 aa12.28□□□□□ -0.44
VPS11-203ENST00000529545 DNAJC10Q8IXB1 793 aa12.28□□□□□ -0.44
VPS11-203ENST00000529545 H0YIN7 160 aa12.27□□□□□ -0.45
VPS11-203ENST00000529545 NFIXQ14938 502 aa12.27□□□□□ -0.45
VPS11-203ENST00000529545 DPY19L2Q6NUT2 758 aa12.27□□□□□ -0.45
VPS11-203ENST00000529545 NARFQ9UHQ1 456 aa12.27□□□□□ -0.45
VPS11-203ENST00000529545 TIMELESSQ9UNS1 1208 aa12.27□□□□□ -0.45
VPS11-203ENST00000529545 SOS1Q07889 1333 aaPredicted RBP12.27□□□□□ -0.45
VPS11-203ENST00000529545 SCN11AQ9UI33 1791 aa12.27□□□□□ -0.45
VPS11-203ENST00000529545 SERPINB2P05120 415 aa12.26□□□□□ -0.45
VPS11-203ENST00000529545 HSPA1AP0DMV8 641 aaKnown RBP12.26□□□□□ -0.45
VPS11-203ENST00000529545 HSPA1BP0DMV9 641 aaKnown RBP12.26□□□□□ -0.45
VPS11-203ENST00000529545 AKAP4Q5JQC9 854 aa12.26□□□□□ -0.45
VPS11-203ENST00000529545 C2CD5Q86YS7 1000 aa12.26□□□□□ -0.45
VPS11-203ENST00000529545 MIER1Q8N108 512 aa12.26□□□□□ -0.45
VPS11-203ENST00000529545 PANK3Q9H999 370 aa12.26□□□□□ -0.45
VPS11-203ENST00000529545 SLC52A2Q9HAB3 445 aa12.26□□□□□ -0.45
VPS11-203ENST00000529545 AFDNP55196 1824 aaKnown RBP12.25□□□□□ -0.45
VPS11-203ENST00000529545 CCDC88AQ3V6T2 1871 aa12.25□□□□□ -0.45
VPS11-203ENST00000529545 CYP19A1P11511 503 aaPredicted RBP12.25□□□□□ -0.45
VPS11-203ENST00000529545 COL15A1P39059 1388 aa12.25□□□□□ -0.45
VPS11-203ENST00000529545 ADAMTS7Q9UKP4 1686 aa12.25□□□□□ -0.45
VPS11-203ENST00000529545 TIAM2Q8IVF5 1701 aa12.24□□□□□ -0.45
VPS11-203ENST00000529545 PLCD3Q8N3E9 789 aa12.24□□□□□ -0.45
VPS11-203ENST00000529545 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
VPS11-203ENST00000529545 PDZRN3Q9UPQ7 1066 aa12.24□□□□□ -0.45
VPS11-203ENST00000529545 DLEC1Q9Y238 1755 aa12.24□□□□□ -0.45
VPS11-203ENST00000529545 A0A087WZG4 1122 aa12.23□□□□□ -0.45
VPS11-203ENST00000529545 SLC39A6Q13433 755 aa12.23□□□□□ -0.45
VPS11-203ENST00000529545 BICDL1Q6ZP65 573 aa12.23□□□□□ -0.45
VPS11-203ENST00000529545 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
VPS11-203ENST00000529545 LGR6Q9HBX8 967 aa12.23□□□□□ -0.45
VPS11-203ENST00000529545 ZBTB1Q9Y2K1 713 aa12.23□□□□□ -0.45
VPS11-203ENST00000529545 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
VPS11-203ENST00000529545 RNMTO43148 476 aaKnown RBP12.22□□□□□ -0.45
VPS11-203ENST00000529545 STARD3NLO95772 234 aa12.22□□□□□ -0.45
VPS11-203ENST00000529545 CANXP27824 592 aaKnown RBP12.22□□□□□ -0.45
VPS11-203ENST00000529545 IL13P35225 146 aa12.22□□□□□ -0.45
VPS11-203ENST00000529545 PDE6BP35913 854 aa12.22□□□□□ -0.45
VPS11-203ENST00000529545 EIF4G2P78344 907 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS11-203ENST00000529545 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
VPS11-203ENST00000529545 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
VPS11-203ENST00000529545 ZNF622Q969S3 477 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS11-203ENST00000529545 KNSTRNQ9Y448 316 aa12.22□□□□□ -0.45
VPS11-203ENST00000529545 NFKBIEO00221 500 aa12.21□□□□□ -0.45
VPS11-203ENST00000529545 GABBR2O75899 941 aa12.21□□□□□ -0.45
VPS11-203ENST00000529545 NPM2Q86SE8 214 aaKnown RBP12.21□□□□□ -0.45
VPS11-203ENST00000529545 TTC5Q8N0Z6 440 aa12.21□□□□□ -0.45
VPS11-203ENST00000529545 BCL2L12Q9HB09 334 aa12.21□□□□□ -0.45
VPS11-203ENST00000529545 NPHP1O15259 732 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms