RNA–Protein interactions for RNA: ENST00000529273.1

ROM1-204, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 4

Gene ROM1, Length 249 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-204ENST00000529273 BTBD11A6QL63 1104 aa36.86■■■■□ 3.49
ROM1-204ENST00000529273 CANXP27824 592 aaKnown RBP36.86■■■■□ 3.49
ROM1-204ENST00000529273 COL15A1P39059 1388 aa36.86■■■■□ 3.49
ROM1-204ENST00000529273 TEX13AQ9BXU3 409 aaPredicted RBP36.85■■■■□ 3.49
ROM1-204ENST00000529273 NARFQ9UHQ1 456 aa36.85■■■■□ 3.49
ROM1-204ENST00000529273 TM4SF1P30408 202 aa36.84■■■■□ 3.49
ROM1-204ENST00000529273 MCM10Q7L590 875 aa36.84■■■■□ 3.49
ROM1-204ENST00000529273 FMNL2Q96PY5 1086 aa36.84■■■■□ 3.49
ROM1-204ENST00000529273 KCNQ3O43525 872 aa36.83■■■■□ 3.49
ROM1-204ENST00000529273 SIPA1L3O60292 1781 aaPredicted RBP36.82■■■■□ 3.48
ROM1-204ENST00000529273 DPEP1P16444 411 aa36.82■■■■□ 3.48
ROM1-204ENST00000529273 KIF13BQ9NQT8 1826 aa36.82■■■■□ 3.48
ROM1-204ENST00000529273 POLRMTO00411 1230 aaKnown RBP36.8■■■■□ 3.48
ROM1-204ENST00000529273 HTATSF1O43719 755 aaKnown RBP36.8■■■■□ 3.48
ROM1-204ENST00000529273 EIF5P55010 431 aaKnown RBP36.79■■■■□ 3.48
ROM1-204ENST00000529273 DCTN1Q14203 1278 aa36.79■■■■□ 3.48
ROM1-204ENST00000529273 BCL2L12Q9HB09 334 aa36.78■■■■□ 3.48
ROM1-204ENST00000529273 DDX10Q13206 875 aaKnown RBP36.77■■■■□ 3.48
ROM1-204ENST00000529273 NFIXQ14938 502 aa36.77■■■■□ 3.48
ROM1-204ENST00000529273 BCS1LQ9Y276 419 aa36.77■■■■□ 3.48
ROM1-204ENST00000529273 KIAA1551Q9HCM1 1747 aa36.76■■■■□ 3.48
ROM1-204ENST00000529273 NEFMP07197 916 aa36.76■■■■□ 3.48
ROM1-204ENST00000529273 A0A087WZG4 1122 aa36.75■■■■□ 3.47
ROM1-204ENST00000529273 RALBP1Q15311 655 aa36.75■■■■□ 3.47
ROM1-204ENST00000529273 KCNA3P22001 575 aa36.74■■■■□ 3.47
ROM1-204ENST00000529273 N4BP2Q86UW6 1770 aaPredicted RBP36.73■■■■□ 3.47
ROM1-204ENST00000529273 A1BGP04217 495 aa36.73■■■■□ 3.47
ROM1-204ENST00000529273 PLEKHF1Q96S99 279 aa36.73■■■■□ 3.47
ROM1-204ENST00000529273 ZNF330Q9Y3S2 320 aaPredicted RBP36.72■■■■□ 3.47
ROM1-204ENST00000529273 IL6STP40189 918 aaPredicted RBP36.7■■■■□ 3.47
ROM1-204ENST00000529273 TAF7Q15545 349 aaPredicted RBP36.69■■■■□ 3.46
ROM1-204ENST00000529273 USP16Q9Y5T5 823 aa36.69■■■■□ 3.46
ROM1-204ENST00000529273 ATP10DQ9P241 1426 aa36.68■■■■□ 3.46
ROM1-204ENST00000529273 PNNQ9H307 717 aaKnown RBP36.68■■■■□ 3.46
ROM1-204ENST00000529273 PIM2Q9P1W9 311 aa36.68■■■■□ 3.46
ROM1-204ENST00000529273 TBC1D2BQ9UPU7 963 aa36.68■■■■□ 3.46
ROM1-204ENST00000529273 SERPINB2P05120 415 aa36.67■■■■□ 3.46
ROM1-204ENST00000529273 SNRPA1P09661 255 aaKnown RBP36.67■■■■□ 3.46
ROM1-204ENST00000529273 PRAMEF22A3QJZ6 481 aa36.66■■■■□ 3.46
ROM1-204ENST00000529273 CHRNA5P30532 468 aa36.66■■■■□ 3.46
ROM1-204ENST00000529273 ADCY9O60503 1353 aa36.66■■■■□ 3.46
ROM1-204ENST00000529273 GIGYF1O75420 1035 aaPredicted RBP36.65■■■■□ 3.46
ROM1-204ENST00000529273 NFE2L2Q16236 605 aa36.65■■■■□ 3.46
ROM1-204ENST00000529273 BICDL1Q6ZP65 573 aa36.65■■■■□ 3.46
ROM1-204ENST00000529273 NPM2Q86SE8 214 aaKnown RBP36.65■■■■□ 3.46
ROM1-204ENST00000529273 ARHGAP27Q6ZUM4 889 aa36.64■■■■□ 3.46
ROM1-204ENST00000529273 C1QTNF8P60827 252 aa36.63■■■■□ 3.45
ROM1-204ENST00000529273 MIS18AQ9NYP9 233 aa36.63■■■■□ 3.45
ROM1-204ENST00000529273 MAPK8IP3Q9UPT6 1336 aa36.62■■■■□ 3.45
ROM1-204ENST00000529273 DALRD3Q5D0E6 543 aaKnown RBP36.62■■■■□ 3.45
ROM1-204ENST00000529273 TBC1D9BQ66K14 1250 aa36.62■■■■□ 3.45
ROM1-204ENST00000529273 PIP4K2AP48426 406 aaPredicted RBP36.6■■■■□ 3.45
ROM1-204ENST00000529273 CAMTA2O94983 1202 aa36.58■■■■□ 3.45
ROM1-204ENST00000529273 PNISRQ8TF01 805 aaKnown RBP36.58■■■■□ 3.45
ROM1-204ENST00000529273 THUMPD2Q9BTF0 503 aaKnown RBP36.58■■■■□ 3.45
ROM1-204ENST00000529273 GPBP1L1Q9HC44 474 aaPredicted RBP36.58■■■■□ 3.45
ROM1-204ENST00000529273 MYBBP1AQ9BQG0 1328 aaKnown RBP36.58■■■■□ 3.45
ROM1-204ENST00000529273 DZIP3Q86Y13 1208 aaKnown RBP36.57■■■■□ 3.44
ROM1-204ENST00000529273 ZNF526Q8TF50 670 aaPredicted RBP36.57■■■■□ 3.44
ROM1-204ENST00000529273 BRCA1P38398 1863 aaKnown RBP36.56■■■■□ 3.44
ROM1-204ENST00000529273 NRXN2Q9P2S2 1712 aa36.56■■■■□ 3.44
ROM1-204ENST00000529273 AFDNP55196 1824 aaKnown RBP36.54■■■■□ 3.44
ROM1-204ENST00000529273 SCN7AQ01118 1682 aa36.52■■■■□ 3.44
ROM1-204ENST00000529273 NBPF26B4DH59 902 aa36.52■■■■□ 3.44
ROM1-204ENST00000529273 NBPF10Q6P3W6 841 aaKnown RBP36.52■■■■□ 3.44
ROM1-204ENST00000529273 NBPF15Q8N660 670 aa36.52■■■■□ 3.44
ROM1-204ENST00000529273 CARMIL3Q8ND23 1372 aa36.52■■■■□ 3.44
ROM1-204ENST00000529273 C2CD5Q86YS7 1000 aa36.51■■■■□ 3.44
ROM1-204ENST00000529273 SETDB2Q96T68 719 aa36.51■■■■□ 3.44
ROM1-204ENST00000529273 DLG5Q8TDM6 1919 aa36.5■■■■□ 3.43
ROM1-204ENST00000529273 H0YIN7 160 aa36.48■■■■□ 3.43
ROM1-204ENST00000529273 RIPK4P57078 832 aa36.48■■■■□ 3.43
ROM1-204ENST00000529273 EIF4A1P60842 406 aaKnown RBP36.48■■■■□ 3.43
ROM1-204ENST00000529273 PRR5LQ6MZQ0 368 aa36.48■■■■□ 3.43
ROM1-204ENST00000529273 ARFGEF1Q9Y6D6 1849 aa36.46■■■■□ 3.43
ROM1-204ENST00000529273 CLEC4GQ6UXB4 293 aa36.46■■■■□ 3.43
ROM1-204ENST00000529273 CCDC24Q8N4L8 307 aa36.46■■■■□ 3.43
ROM1-204ENST00000529273 BRIP1Q9BX63 1249 aa36.46■■■■□ 3.43
ROM1-204ENST00000529273 C9orf131Q5VYM1 1079 aa36.45■■■■□ 3.43
ROM1-204ENST00000529273 TMPOP42166 694 aaKnown RBP36.44■■■■□ 3.42
ROM1-204ENST00000529273 TTLL6Q8N841 843 aa36.44■■■■□ 3.42
ROM1-204ENST00000529273 ZNF652Q9Y2D9 606 aa36.44■■■■□ 3.42
ROM1-204ENST00000529273 PDE6BP35913 854 aa36.43■■■■□ 3.42
ROM1-204ENST00000529273 CNBD1Q8NA66 436 aa36.43■■■■□ 3.42
ROM1-204ENST00000529273 SENP3-EIF4A1A0A087X0R7 540 aa36.42■■■■□ 3.42
ROM1-204ENST00000529273 NPHP1O15259 732 aa36.42■■■■□ 3.42
ROM1-204ENST00000529273 CCDC146Q8IYE0 955 aa36.41■■■■□ 3.42
ROM1-204ENST00000529273 PDZRN3Q9UPQ7 1066 aa36.41■■■■□ 3.42
ROM1-204ENST00000529273 KDM3BQ7LBC6 1761 aa36.4■■■■□ 3.42
ROM1-204ENST00000529273 TSPYL4Q9UJ04 414 aa36.4■■■■□ 3.42
ROM1-204ENST00000529273 RGL2O15211 777 aa36.39■■■■□ 3.42
ROM1-204ENST00000529273 LMOD3Q0VAK6 560 aa36.39■■■■□ 3.42
ROM1-204ENST00000529273 WDR43Q15061 677 aaKnown RBP eCLIP36.39■■■■□ 3.42
ROM1-204ENST00000529273 PRKRIP1Q9H875 184 aaPredicted RBP36.39■■■■□ 3.42
ROM1-204ENST00000529273 BCORQ6W2J9 1755 aa36.39■■■■□ 3.42
ROM1-204ENST00000529273 ST5P78524 1137 aa36.38■■■■□ 3.41
ROM1-204ENST00000529273 ZNF622Q969S3 477 aaKnown RBP eCLIP36.38■■■■□ 3.41
ROM1-204ENST00000529273 RRP7AQ9Y3A4 280 aaKnown RBP36.38■■■■□ 3.41
ROM1-204ENST00000529273 NBPF5PQ86XG9 351 aaPredicted RBP36.37■■■■□ 3.41
ROM1-204ENST00000529273 RNF181Q9P0P0 153 aa36.37■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms