RNA–Protein interactions for RNA: ENST00000529098.5

PDZD3-210, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,532 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-210ENST00000529098 DRC7Q8IY82 874 aa21.44■■□□□ 1.02
PDZD3-210ENST00000529098 ZFYVE9O95405 1425 aa21.44■■□□□ 1.02
PDZD3-210ENST00000529098 CHMLP26374 656 aa21.44■■□□□ 1.02
PDZD3-210ENST00000529098 CYP2C19P33261 490 aa21.43■■□□□ 1.02
PDZD3-210ENST00000529098 RBM6P78332 1123 aaKnown RBP21.43■■□□□ 1.02
PDZD3-210ENST00000529098 KIF1BPQ96EK5 621 aa21.43■■□□□ 1.02
PDZD3-210ENST00000529098 PHACTR3Q96KR7 559 aa21.43■■□□□ 1.02
PDZD3-210ENST00000529098 PLA2G4DQ86XP0 818 aa21.42■■□□□ 1.02
PDZD3-210ENST00000529098 ERO1AQ96HE7 468 aa21.42■■□□□ 1.02
PDZD3-210ENST00000529098 ZNF75DP51815 510 aa21.42■■□□□ 1.02
PDZD3-210ENST00000529098 SAFB2Q14151 953 aaKnown RBP eCLIP21.42■■□□□ 1.02
PDZD3-210ENST00000529098 FBXO38Q6PIJ6 1188 aa21.42■■□□□ 1.02
PDZD3-210ENST00000529098 STAG3Q9UJ98 1225 aa21.42■■□□□ 1.02
PDZD3-210ENST00000529098 ZNF215Q9UL58 517 aaPredicted RBP21.42■■□□□ 1.02
PDZD3-210ENST00000529098 MRVI1Q9Y6F6 885 aa21.42■■□□□ 1.02
PDZD3-210ENST00000529098 CCDC171Q6TFL3 1326 aa21.41■■□□□ 1.02
PDZD3-210ENST00000529098 MAP3K11Q16584 847 aa21.41■■□□□ 1.02
PDZD3-210ENST00000529098 STK26Q9P289 416 aa21.41■■□□□ 1.02
PDZD3-210ENST00000529098 NRBP1Q9UHY1 535 aa21.41■■□□□ 1.02
PDZD3-210ENST00000529098 LUZP1Q86V48 1076 aa21.4■■□□□ 1.02
PDZD3-210ENST00000529098 TYRO3Q06418 890 aa21.4■■□□□ 1.02
PDZD3-210ENST00000529098 RNF20Q5VTR2 975 aa21.4■■□□□ 1.02
PDZD3-210ENST00000529098 NOL10Q9BSC4 688 aaKnown RBP21.4■■□□□ 1.02
PDZD3-210ENST00000529098 ZNF592Q92610 1267 aa21.39■■□□□ 1.02
PDZD3-210ENST00000529098 TERF2IPQ9NYB0 399 aa21.39■■□□□ 1.02
PDZD3-210ENST00000529098 SALL3Q9BXA9 1300 aa21.39■■□□□ 1.02
PDZD3-210ENST00000529098 MSH6P52701 1360 aa21.39■■□□□ 1.02
PDZD3-210ENST00000529098 HSPA4P34932 840 aa21.39■■□□□ 1.01
PDZD3-210ENST00000529098 LMOD3Q0VAK6 560 aa21.39■■□□□ 1.01
PDZD3-210ENST00000529098 TRIM5Q9C035 493 aa21.39■■□□□ 1.01
PDZD3-210ENST00000529098 TRIM6-TRIM34B2RNG4 842 aa21.38■■□□□ 1.01
PDZD3-210ENST00000529098 TRIM34Q9BYJ4 488 aa21.38■■□□□ 1.01
PDZD3-210ENST00000529098 SMC3Q9UQE7 1217 aa21.38■■□□□ 1.01
PDZD3-210ENST00000529098 DNM1Q05193 864 aaKnown RBP21.38■■□□□ 1.01
PDZD3-210ENST00000529098 BMS1Q14692 1282 aaKnown RBP21.38■■□□□ 1.01
PDZD3-210ENST00000529098 MEIS3Q99687 375 aa21.38■■□□□ 1.01
PDZD3-210ENST00000529098 KIAA0232Q92628 1395 aa21.38■■□□□ 1.01
PDZD3-210ENST00000529098 CACTINQ8WUQ7 758 aaKnown RBP21.37■■□□□ 1.01
PDZD3-210ENST00000529098 CBX8Q9HC52 389 aa21.37■■□□□ 1.01
PDZD3-210ENST00000529098 HAP1P54257 671 aaPredicted RBP21.37■■□□□ 1.01
PDZD3-210ENST00000529098 HNRNPH2P55795 449 aaKnown RBP21.37■■□□□ 1.01
PDZD3-210ENST00000529098 MAPK8IP2Q13387 824 aaPredicted RBP21.37■■□□□ 1.01
PDZD3-210ENST00000529098 NUP62CLQ9H1M0 184 aa21.37■■□□□ 1.01
PDZD3-210ENST00000529098 FEZ2Q9UHY8 353 aaPredicted RBP21.37■■□□□ 1.01
PDZD3-210ENST00000529098 PPP6R1Q9UPN7 881 aa21.37■■□□□ 1.01
PDZD3-210ENST00000529098 NYAP1Q6ZVC0 841 aa21.36■■□□□ 1.01
PDZD3-210ENST00000529098 LIMCH1Q9UPQ0 1083 aa21.36■■□□□ 1.01
PDZD3-210ENST00000529098 ARHGEF28Q8N1W1 1705 aaKnown RBP21.36■■□□□ 1.01
PDZD3-210ENST00000529098 CPSF1Q10570 1443 aaKnown RBP21.36■■□□□ 1.01
PDZD3-210ENST00000529098 NEMFO60524 1076 aa21.36■■□□□ 1.01
PDZD3-210ENST00000529098 CDC25BP30305 580 aa21.36■■□□□ 1.01
PDZD3-210ENST00000529098 PTPN14Q15678 1187 aa21.36■■□□□ 1.01
PDZD3-210ENST00000529098 ELF2Q15723 593 aa21.36■■□□□ 1.01
PDZD3-210ENST00000529098 TDRD7Q8NHU6 1098 aaKnown RBP21.36■■□□□ 1.01
PDZD3-210ENST00000529098 ST7Q9NRC1 585 aa21.36■■□□□ 1.01
PDZD3-210ENST00000529098 RAD50Q92878 1312 aa21.36■■□□□ 1.01
PDZD3-210ENST00000529098 TTC14Q96N46 770 aa21.35■■□□□ 1.01
PDZD3-210ENST00000529098 CLIP2Q9UDT6 1046 aa21.35■■□□□ 1.01
PDZD3-210ENST00000529098 PTPRCP08575 1304 aa21.35■■□□□ 1.01
PDZD3-210ENST00000529098 IRX3P78415 501 aaPredicted RBP21.35■■□□□ 1.01
PDZD3-210ENST00000529098 KRT24Q2M2I5 525 aa21.35■■□□□ 1.01
PDZD3-210ENST00000529098 RILPL2Q969X0 211 aa21.35■■□□□ 1.01
PDZD3-210ENST00000529098 ZNF446Q9NWS9 450 aa21.35■■□□□ 1.01
PDZD3-210ENST00000529098 TUBGCP6Q96RT7 1819 aa21.35■■□□□ 1.01
PDZD3-210ENST00000529098 RTF1Q92541 710 aaKnown RBP21.34■■□□□ 1.01
PDZD3-210ENST00000529098 MTMR6Q9Y217 621 aa21.34■■□□□ 1.01
PDZD3-210ENST00000529098 SLU7O95391 586 aaKnown RBP21.34■■□□□ 1.01
PDZD3-210ENST00000529098 HMOX1P09601 288 aa21.34■■□□□ 1.01
PDZD3-210ENST00000529098 ANO6Q4KMQ2 910 aa21.34■■□□□ 1.01
PDZD3-210ENST00000529098 TSHZ3Q63HK5 1081 aa21.34■■□□□ 1.01
PDZD3-210ENST00000529098 AEBP1Q8IUX7 1158 aa21.34■■□□□ 1.01
PDZD3-210ENST00000529098 ESF1Q9H501 851 aaKnown RBP21.34■■□□□ 1.01
PDZD3-210ENST00000529098 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.34■■□□□ 1.01
PDZD3-210ENST00000529098 V9GYY5 206 aaPredicted RBP21.34■■□□□ 1.01
PDZD3-210ENST00000529098 SPATA31D1Q6ZQQ2 1576 aa21.34■■□□□ 1.01
PDZD3-210ENST00000529098 SRPK2P78362 688 aaKnown RBP21.33■■□□□ 1.01
PDZD3-210ENST00000529098 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1.01
PDZD3-210ENST00000529098 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.33■■□□□ 1.01
PDZD3-210ENST00000529098 RIMS2Q9UQ26 1411 aa21.32■■□□□ 1
PDZD3-210ENST00000529098 AK2P54819 239 aa21.32■■□□□ 1
PDZD3-210ENST00000529098 HTATSF1O43719 755 aaKnown RBP21.32■■□□□ 1
PDZD3-210ENST00000529098 LRRC8AQ8IWT6 810 aa21.32■■□□□ 1
PDZD3-210ENST00000529098 H2AFXP16104 143 aaPredicted RBP21.31■■□□□ 1
PDZD3-210ENST00000529098 RAD51AP2Q09MP3 1159 aa21.31■■□□□ 1
PDZD3-210ENST00000529098 CCDC144BQ3MJ40 725 aa21.31■■□□□ 1
PDZD3-210ENST00000529098 RUFY3Q7L099 469 aa21.31■■□□□ 1
PDZD3-210ENST00000529098 CCDC144CPQ8IYA2 1237 aa21.31■■□□□ 1
PDZD3-210ENST00000529098 TNMDQ9H2S6 317 aa21.31■■□□□ 1
PDZD3-210ENST00000529098 STAP2Q9UGK3 403 aa21.31■■□□□ 1
PDZD3-210ENST00000529098 A2ML1A8K2U0 1454 aa21.31■■□□□ 1
PDZD3-210ENST00000529098 ERBB3P21860 1342 aa21.31■■□□□ 1
PDZD3-210ENST00000529098 CD163L1Q9NR16 1453 aa21.31■■□□□ 1
PDZD3-210ENST00000529098 LRRCC1Q9C099 1032 aa21.31■■□□□ 1
PDZD3-210ENST00000529098 ELP1O95163 1332 aa21.31■■□□□ 1
PDZD3-210ENST00000529098 EFCC1Q9HA90 598 aa21.3■■□□□ 1
PDZD3-210ENST00000529098 KIF2AO00139 706 aaPredicted RBP21.3■■□□□ 1
PDZD3-210ENST00000529098 CAMK4Q16566 473 aa21.3■■□□□ 1
PDZD3-210ENST00000529098 POLKQ9UBT6 870 aa21.3■■□□□ 1
PDZD3-210ENST00000529098 USP27XA6NNY8 438 aa21.29■■□□□ 1
PDZD3-210ENST00000529098 GJB2P29033 226 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms