RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 NBPF1Q3BBV0 1214 aa9.1□□□□□ -0.95
CSDE1-212ENST00000529046 ZNF295-AS1Q8N0V1 137 aa9.1□□□□□ -0.95
CSDE1-212ENST00000529046 LARGE2Q8N3Y3 721 aa9.1□□□□□ -0.95
CSDE1-212ENST00000529046 SVOPQ8N4V2 548 aa9.1□□□□□ -0.95
CSDE1-212ENST00000529046 C1orf216Q8TAB5 229 aa9.1□□□□□ -0.95
CSDE1-212ENST00000529046 CRISPLD1Q9H336 500 aa9.1□□□□□ -0.95
CSDE1-212ENST00000529046 SCHIP1Q9P0W5 487 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-212ENST00000529046 ZNF385CQ66K41 422 aaPredicted RBP9.09□□□□□ -0.95
CSDE1-212ENST00000529046 PBXIP1Q96AQ6 731 aa9.09□□□□□ -0.95
CSDE1-212ENST00000529046 ZNF594Q96JF6 807 aaPredicted RBP9.09□□□□□ -0.95
CSDE1-212ENST00000529046 RBM19Q9Y4C8 960 aaKnown RBP9.09□□□□□ -0.95
CSDE1-212ENST00000529046 ATP4AP20648 1035 aa9.08□□□□□ -0.96
CSDE1-212ENST00000529046 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-212ENST00000529046 EPHA4P54764 986 aa9.08□□□□□ -0.96
CSDE1-212ENST00000529046 TNS4Q8IZW8 715 aa9.08□□□□□ -0.96
CSDE1-212ENST00000529046 SIX5Q8N196 739 aa9.08□□□□□ -0.96
CSDE1-212ENST00000529046 CFHR5Q9BXR6 569 aa9.08□□□□□ -0.96
CSDE1-212ENST00000529046 PHF24Q9UPV7 400 aa9.08□□□□□ -0.96
CSDE1-212ENST00000529046 IGF1RP08069 1367 aa9.08□□□□□ -0.96
CSDE1-212ENST00000529046 RB1CC1Q8TDY2 1594 aa9.07□□□□□ -0.96
CSDE1-212ENST00000529046 TATP17735 454 aaPredicted RBP9.07□□□□□ -0.96
CSDE1-212ENST00000529046 MX2P20592 715 aa9.07□□□□□ -0.96
CSDE1-212ENST00000529046 RASA1P20936 1047 aa9.07□□□□□ -0.96
CSDE1-212ENST00000529046 FOXK2Q01167 660 aa9.07□□□□□ -0.96
CSDE1-212ENST00000529046 SLC9A9Q8IVB4 645 aa9.07□□□□□ -0.96
CSDE1-212ENST00000529046 WHAMMQ8TF30 809 aa9.07□□□□□ -0.96
CSDE1-212ENST00000529046 ZDHHC3Q9NYG2 299 aa9.07□□□□□ -0.96
CSDE1-212ENST00000529046 DKK1O94907 266 aa9.06□□□□□ -0.96
CSDE1-212ENST00000529046 UBAP2LQ14157 1087 aaKnown RBP9.06□□□□□ -0.96
CSDE1-212ENST00000529046 SUZ12Q15022 739 aaKnown RBP9.06□□□□□ -0.96
CSDE1-212ENST00000529046 NSFL1CQ9UNZ2 370 aaKnown RBP9.06□□□□□ -0.96
CSDE1-212ENST00000529046 PARP3Q9Y6F1 533 aa9.06□□□□□ -0.96
CSDE1-212ENST00000529046 M0R2N6 131 aa9.05□□□□□ -0.96
CSDE1-212ENST00000529046 ATG7O95352 703 aa9.05□□□□□ -0.96
CSDE1-212ENST00000529046 ELOAQ14241 798 aaKnown RBP9.05□□□□□ -0.96
CSDE1-212ENST00000529046 TEAD4Q15561 434 aa9.05□□□□□ -0.96
CSDE1-212ENST00000529046 ARSJQ5FYB0 599 aaPredicted RBP9.05□□□□□ -0.96
CSDE1-212ENST00000529046 TBCELQ5QJ74 424 aa9.05□□□□□ -0.96
CSDE1-212ENST00000529046 LARP1Q6PKG0 1096 aaKnown RBP9.05□□□□□ -0.96
CSDE1-212ENST00000529046 ZDHHC1Q8WTX9 485 aa9.05□□□□□ -0.96
CSDE1-212ENST00000529046 ARID3AQ99856 593 aa9.05□□□□□ -0.96
CSDE1-212ENST00000529046 NACADO15069 1562 aa9.04□□□□□ -0.96
CSDE1-212ENST00000529046 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.04□□□□□ -0.96
CSDE1-212ENST00000529046 FAM196BA6NMK8 535 aa9.04□□□□□ -0.96
CSDE1-212ENST00000529046 SFI1A8K8P3 1242 aa9.04□□□□□ -0.96
CSDE1-212ENST00000529046 MAP3K10Q02779 954 aa9.04□□□□□ -0.96
CSDE1-212ENST00000529046 FIGNL1Q6PIW4 674 aa9.04□□□□□ -0.96
CSDE1-212ENST00000529046 LYPD4Q6UWN0 246 aa9.04□□□□□ -0.96
CSDE1-212ENST00000529046 NLRP8Q86W28 1048 aa9.04□□□□□ -0.96
CSDE1-212ENST00000529046 ATXN7L1Q9ULK2 861 aaPredicted RBP9.04□□□□□ -0.96
CSDE1-212ENST00000529046 A0A1W2PNR3 127 aa9.03□□□□□ -0.96
CSDE1-212ENST00000529046 NOS2P35228 1153 aa9.03□□□□□ -0.96
CSDE1-212ENST00000529046 TXLNAP40222 546 aa9.03□□□□□ -0.96
CSDE1-212ENST00000529046 TSEN2Q8NCE0 465 aaKnown RBP9.03□□□□□ -0.96
CSDE1-212ENST00000529046 L3MBTL2Q969R5 705 aa9.03□□□□□ -0.96
CSDE1-212ENST00000529046 ABHD17AQ96GS6 310 aa9.03□□□□□ -0.96
CSDE1-212ENST00000529046 TSPAN10Q9H1Z9 355 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-212ENST00000529046 VRTNQ9H8Y1 702 aa9.03□□□□□ -0.96
CSDE1-212ENST00000529046 ZNF232Q9UNY5 417 aa9.03□□□□□ -0.96
CSDE1-212ENST00000529046 CELA2BP08218 269 aaPredicted RBP9.02□□□□□ -0.97
CSDE1-212ENST00000529046 MAP2K3P46734 347 aa9.02□□□□□ -0.97
CSDE1-212ENST00000529046 SEC13P55735 322 aa9.02□□□□□ -0.97
CSDE1-212ENST00000529046 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
CSDE1-212ENST00000529046 PTK7Q13308 1070 aa9.02□□□□□ -0.97
CSDE1-212ENST00000529046 BICDL1Q6ZP65 573 aa9.02□□□□□ -0.97
CSDE1-212ENST00000529046 ZCCHC2Q9C0B9 1178 aaKnown RBP9.02□□□□□ -0.97
CSDE1-212ENST00000529046 NDFIP2Q9NV92 336 aa9.02□□□□□ -0.97
CSDE1-212ENST00000529046 ADAMTS8Q9UP79 889 aa9.02□□□□□ -0.97
CSDE1-212ENST00000529046 CHMP3Q9Y3E7 222 aa9.02□□□□□ -0.97
CSDE1-212ENST00000529046 SERTM1A2A2V5 107 aa9.01□□□□□ -0.97
CSDE1-212ENST00000529046 BNIP3LO60238 219 aa9.01□□□□□ -0.97
CSDE1-212ENST00000529046 ARHGEF15O94989 841 aa9.01□□□□□ -0.97
CSDE1-212ENST00000529046 FGFR3P22607 806 aa9.01□□□□□ -0.97
CSDE1-212ENST00000529046 RFX1P22670 979 aa9.01□□□□□ -0.97
CSDE1-212ENST00000529046 CRTC2Q53ET0 693 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-212ENST00000529046 ARXQ96QS3 562 aa9.01□□□□□ -0.97
CSDE1-212ENST00000529046 ZIC5Q96T25 663 aa9.01□□□□□ -0.97
CSDE1-212ENST00000529046 PCDHGC4Q9Y5F7 938 aa9.01□□□□□ -0.97
CSDE1-212ENST00000529046 GJA3Q9Y6H8 435 aa9.01□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L15C9J2P7 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L10C9JJH3 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L13C9JLJ4 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L12C9JPN9 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L11C9JVI0 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L21D6R901 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L18D6R9N7 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L22D6RA61 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L17D6RBQ6 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L19D6RCP7 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L20D6RJB6 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 ATXN7O15265 892 aaPredicted RBP9□□□□□ -0.97
CSDE1-212ENST00000529046 USP17L24Q0WX57 530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 ACDQ96AP0 544 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 MYO15BQ96JP2 1530 aa9□□□□□ -0.97
CSDE1-212ENST00000529046 EML1O00423 815 aa8.99□□□□□ -0.97
CSDE1-212ENST00000529046 BCRP11274 1271 aa8.99□□□□□ -0.97
CSDE1-212ENST00000529046 BMP4P12644 408 aa8.99□□□□□ -0.97
CSDE1-212ENST00000529046 ENAMQ9NRM1 1142 aa8.99□□□□□ -0.97
CSDE1-212ENST00000529046 DCDC2BA2VCK2 349 aa8.98□□□□□ -0.97
CSDE1-212ENST00000529046 DPYDQ12882 1025 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms