RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 C1orf141Q5JVX7 400 aa26.16■■□□□ 1.78
SSRP1-204ENST00000529002 NRXN2Q9P2S2 1712 aa26.16■■□□□ 1.78
SSRP1-204ENST00000529002 GLTPD2A6NH11 291 aa26.15■■□□□ 1.78
SSRP1-204ENST00000529002 ZPR1O75312 459 aa26.15■■□□□ 1.78
SSRP1-204ENST00000529002 VEGFAP15692 232 aaPredicted RBP26.15■■□□□ 1.78
SSRP1-204ENST00000529002 NFIXQ14938 502 aa26.15■■□□□ 1.78
SSRP1-204ENST00000529002 LMNB1P20700 586 aa26.14■■□□□ 1.78
SSRP1-204ENST00000529002 SOS1Q07889 1333 aaPredicted RBP26.14■■□□□ 1.77
SSRP1-204ENST00000529002 POTECB2RU33 542 aa26.12■■□□□ 1.77
SSRP1-204ENST00000529002 CARMIL3Q8ND23 1372 aa26.11■■□□□ 1.77
SSRP1-204ENST00000529002 BCL2L12Q9HB09 334 aa26.11■■□□□ 1.77
SSRP1-204ENST00000529002 ZC3H4Q9UPT8 1303 aaKnown RBP26.11■■□□□ 1.77
SSRP1-204ENST00000529002 NFKBIEO00221 500 aa26.1■■□□□ 1.77
SSRP1-204ENST00000529002 SLC39A6Q13433 755 aa26.1■■□□□ 1.77
SSRP1-204ENST00000529002 SULT6B1Q6IMI4 303 aa26.1■■□□□ 1.77
SSRP1-204ENST00000529002 SERPINB2P05120 415 aa26.09■■□□□ 1.77
SSRP1-204ENST00000529002 LGR6Q9HBX8 967 aa26.09■■□□□ 1.77
SSRP1-204ENST00000529002 DICER1Q9UPY3 1922 aaKnown RBP26.09■■□□□ 1.77
SSRP1-204ENST00000529002 ANKRD31Q8N7Z5 1873 aa26.08■■□□□ 1.77
SSRP1-204ENST00000529002 CYP19A1P11511 503 aaPredicted RBP26.08■■□□□ 1.77
SSRP1-204ENST00000529002 C2CD5Q86YS7 1000 aa26.08■■□□□ 1.77
SSRP1-204ENST00000529002 TTLL6Q8N841 843 aa26.08■■□□□ 1.77
SSRP1-204ENST00000529002 NARFQ9UHQ1 456 aa26.08■■□□□ 1.77
SSRP1-204ENST00000529002 ZBTB1Q9Y2K1 713 aa26.08■■□□□ 1.77
SSRP1-204ENST00000529002 COL15A1P39059 1388 aa26.07■■□□□ 1.76
SSRP1-204ENST00000529002 ZNF219Q9P2Y4 722 aaPredicted RBP26.06■■□□□ 1.76
SSRP1-204ENST00000529002 FER1L6Q2WGJ9 1857 aa26.04■■□□□ 1.76
SSRP1-204ENST00000529002 BICDL1Q6ZP65 573 aa26.04■■□□□ 1.76
SSRP1-204ENST00000529002 PANK3Q9H999 370 aa26.04■■□□□ 1.76
SSRP1-204ENST00000529002 SLC52A2Q9HAB3 445 aa26.04■■□□□ 1.76
SSRP1-204ENST00000529002 CACNA1SQ13698 1873 aa26.04■■□□□ 1.76
SSRP1-204ENST00000529002 CCDC24Q8N4L8 307 aa26.03■■□□□ 1.76
SSRP1-204ENST00000529002 MKRN1Q9UHC7 482 aaKnown RBP26.03■■□□□ 1.76
SSRP1-204ENST00000529002 COL11A2P13942 1736 aaPredicted RBP26.02■■□□□ 1.76
SSRP1-204ENST00000529002 POTEIP0CG38 1075 aa26.02■■□□□ 1.76
SSRP1-204ENST00000529002 POTEJP0CG39 1038 aa26.02■■□□□ 1.76
SSRP1-204ENST00000529002 H0YIN7 160 aa26.01■■□□□ 1.75
SSRP1-204ENST00000529002 CANXP27824 592 aaKnown RBP26■■□□□ 1.75
SSRP1-204ENST00000529002 IL13P35225 146 aa26■■□□□ 1.75
SSRP1-204ENST00000529002 AKAP4Q5JQC9 854 aa26■■□□□ 1.75
SSRP1-204ENST00000529002 RNMTO43148 476 aaKnown RBP25.99■■□□□ 1.75
SSRP1-204ENST00000529002 C21orf2O43822 256 aa25.99■■□□□ 1.75
SSRP1-204ENST00000529002 MORC1Q86VD1 984 aa25.99■■□□□ 1.75
SSRP1-204ENST00000529002 ZNF622Q969S3 477 aaKnown RBP eCLIP25.99■■□□□ 1.754e-8■■■■□ 21.5
SSRP1-204ENST00000529002 DPY19L2Q6NUT2 758 aa25.98■■□□□ 1.75
SSRP1-204ENST00000529002 MRC1P22897 1456 aa25.98■■□□□ 1.75
SSRP1-204ENST00000529002 ERFEQ4G0M1 354 aa25.97■■□□□ 1.75
SSRP1-204ENST00000529002 SLX4Q8IY92 1834 aa25.97■■□□□ 1.75
SSRP1-204ENST00000529002 UBR2Q8IWV8 1755 aa25.96■■□□□ 1.75
SSRP1-204ENST00000529002 FOXN1O15353 648 aa25.95■■□□□ 1.74
SSRP1-204ENST00000529002 TBC1D9BQ66K14 1250 aa25.95■■□□□ 1.74
SSRP1-204ENST00000529002 DDNO94850 711 aaPredicted RBP25.94■■□□□ 1.74
SSRP1-204ENST00000529002 HMOX1P09601 288 aa25.94■■□□□ 1.74
SSRP1-204ENST00000529002 CHADLQ6NUI6 762 aa25.94■■□□□ 1.74
SSRP1-204ENST00000529002 CREBZFQ9NS37 354 aa25.94■■□□□ 1.74
SSRP1-204ENST00000529002 EIF5P55010 431 aaKnown RBP25.91■■□□□ 1.74
SSRP1-204ENST00000529002 PRR5LQ6MZQ0 368 aa25.91■■□□□ 1.74
SSRP1-204ENST00000529002 SCN7AQ01118 1682 aa25.9■■□□□ 1.74
SSRP1-204ENST00000529002 MTHFSDQ2M296 383 aaKnown RBP25.9■■□□□ 1.74
SSRP1-204ENST00000529002 TBC1D2BQ9UPU7 963 aa25.89■■□□□ 1.74
SSRP1-204ENST00000529002 ZNF330Q9Y3S2 320 aaPredicted RBP25.89■■□□□ 1.74
SSRP1-204ENST00000529002 VSIG10Q8N0Z9 540 aa25.88■■□□□ 1.73
SSRP1-204ENST00000529002 CNTNAP1P78357 1384 aa25.87■■□□□ 1.73
SSRP1-204ENST00000529002 BRIP1Q9BX63 1249 aa25.87■■□□□ 1.73
SSRP1-204ENST00000529002 TAOK3Q9H2K8 898 aa25.87■■□□□ 1.73
SSRP1-204ENST00000529002 HSPA5P11021 654 aaKnown RBP25.86■■□□□ 1.73
SSRP1-204ENST00000529002 PDE6BP35913 854 aa25.86■■□□□ 1.73
SSRP1-204ENST00000529002 ARFGEF2Q9Y6D5 1785 aa25.85■■□□□ 1.73
SSRP1-204ENST00000529002 PASKQ96RG2 1323 aa25.85■■□□□ 1.73
SSRP1-204ENST00000529002 SCN4AP35499 1836 aa25.84■■□□□ 1.73
SSRP1-204ENST00000529002 ZNF496Q96IT1 587 aaPredicted RBP25.84■■□□□ 1.73
SSRP1-204ENST00000529002 LTBP3Q9NS15 1303 aa25.84■■□□□ 1.73
SSRP1-204ENST00000529002 A0A087WZG4 1122 aa25.83■■□□□ 1.73
SSRP1-204ENST00000529002 STARD3NLO95772 234 aa25.83■■□□□ 1.73
SSRP1-204ENST00000529002 VEGFBP49765 207 aa25.83■■□□□ 1.73
SSRP1-204ENST00000529002 PRPF40BQ6NWY9 871 aaKnown RBP25.82■■□□□ 1.72
SSRP1-204ENST00000529002 TTC5Q8N0Z6 440 aa25.81■■□□□ 1.72
SSRP1-204ENST00000529002 PRDM10Q9NQV6 1147 aa25.81■■□□□ 1.72
SSRP1-204ENST00000529002 SIPA1L3O60292 1781 aaPredicted RBP25.8■■□□□ 1.72
SSRP1-204ENST00000529002 A1BGP04217 495 aa25.8■■□□□ 1.72
SSRP1-204ENST00000529002 TAF1DQ9H5J8 278 aaPredicted RBP25.8■■□□□ 1.72
SSRP1-204ENST00000529002 PDZRN3Q9UPQ7 1066 aa25.8■■□□□ 1.72
SSRP1-204ENST00000529002 KNSTRNQ9Y448 316 aa25.8■■□□□ 1.72
SSRP1-204ENST00000529002 SRGNP10124 158 aa25.79■■□□□ 1.72
SSRP1-204ENST00000529002 LDHDQ86WU2 507 aa25.79■■□□□ 1.72
SSRP1-204ENST00000529002 CNBD1Q8NA66 436 aa25.79■■□□□ 1.72
SSRP1-204ENST00000529002 CNKSR1Q969H4 720 aa25.79■■□□□ 1.72
SSRP1-204ENST00000529002 HEG1Q9ULI3 1381 aa25.79■■□□□ 1.72
SSRP1-204ENST00000529002 BCORQ6W2J9 1755 aa25.79■■□□□ 1.72
SSRP1-204ENST00000529002 ITGBL1O95965 494 aaPredicted RBP25.78■■□□□ 1.72
SSRP1-204ENST00000529002 CTCFP49711 727 aaPredicted RBP25.78■■□□□ 1.72
SSRP1-204ENST00000529002 LBX1P52954 281 aa25.78■■□□□ 1.72
SSRP1-204ENST00000529002 EIF4G2P78344 907 aaKnown RBP eCLIP25.78■■□□□ 1.72
SSRP1-204ENST00000529002 EAPPQ56P03 285 aaPredicted RBP25.78■■□□□ 1.72
SSRP1-204ENST00000529002 STYK1Q6J9G0 422 aa25.78■■□□□ 1.72
SSRP1-204ENST00000529002 NPHP1O15259 732 aa25.77■■□□□ 1.72
SSRP1-204ENST00000529002 CAMTA2O94983 1202 aa25.77■■□□□ 1.72
SSRP1-204ENST00000529002 OLFM4Q6UX06 510 aa25.77■■□□□ 1.72
SSRP1-204ENST00000529002 AIDAQ96BJ3 306 aa25.77■■□□□ 1.72
SSRP1-204ENST00000529002 SETDB2Q96T68 719 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms