RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 TNNQ9UQP3 1299 aa31.66■■■□□ 2.66
LDLRAD3-203ENST00000528989 PDIA6Q15084 440 aa31.65■■■□□ 2.66
LDLRAD3-203ENST00000528989 A1BGP04217 495 aa31.65■■■□□ 2.66
LDLRAD3-203ENST00000528989 BRPF1P55201 1214 aaPredicted RBP31.65■■■□□ 2.66
LDLRAD3-203ENST00000528989 C20orf194Q5TEA3 1177 aa31.65■■■□□ 2.66
LDLRAD3-203ENST00000528989 ITPK1Q13572 414 aa31.64■■■□□ 2.66
LDLRAD3-203ENST00000528989 PHAXQ9H814 394 aaKnown RBP31.63■■■□□ 2.65
LDLRAD3-203ENST00000528989 DBF4Q9UBU7 674 aaPredicted RBP31.63■■■□□ 2.65
LDLRAD3-203ENST00000528989 MYL6BP14649 208 aa31.62■■■□□ 2.65
LDLRAD3-203ENST00000528989 CANXP27824 592 aaKnown RBP31.62■■■□□ 2.65
LDLRAD3-203ENST00000528989 NBPF26B4DH59 902 aa31.61■■■□□ 2.65
LDLRAD3-203ENST00000528989 CYP19A1P11511 503 aaPredicted RBP31.61■■■□□ 2.65
LDLRAD3-203ENST00000528989 NBPF14Q5TI25 921 aa31.61■■■□□ 2.65
LDLRAD3-203ENST00000528989 NBPF10Q6P3W6 841 aaKnown RBP31.61■■■□□ 2.65
LDLRAD3-203ENST00000528989 NBPF15Q8N660 670 aa31.61■■■□□ 2.65
LDLRAD3-203ENST00000528989 TEX13AQ9BXU3 409 aaPredicted RBP31.61■■■□□ 2.65
LDLRAD3-203ENST00000528989 CLUAP1Q96AJ1 413 aa31.6■■■□□ 2.65
LDLRAD3-203ENST00000528989 CHMP4AQ9BY43 222 aa31.59■■■□□ 2.65
LDLRAD3-203ENST00000528989 DDX21Q9NR30 783 aaKnown RBP eCLIP31.59■■■□□ 2.65
LDLRAD3-203ENST00000528989 KIF16BQ96L93 1317 aa31.59■■■□□ 2.65
LDLRAD3-203ENST00000528989 STARD3NLO95772 234 aa31.59■■■□□ 2.65
LDLRAD3-203ENST00000528989 TRIM27P14373 513 aa31.59■■■□□ 2.65
LDLRAD3-203ENST00000528989 APBA3O96018 575 aa31.58■■■□□ 2.65
LDLRAD3-203ENST00000528989 ZKSCAN2Q63HK3 967 aa31.58■■■□□ 2.65
LDLRAD3-203ENST00000528989 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.58■■■□□ 2.65
LDLRAD3-203ENST00000528989 FLIIQ13045 1269 aa31.57■■■□□ 2.64
LDLRAD3-203ENST00000528989 CCNL1Q9UK58 526 aaPredicted RBP31.57■■■□□ 2.64
LDLRAD3-203ENST00000528989 ATF7IPQ6VMQ6 1270 aa31.57■■■□□ 2.64
LDLRAD3-203ENST00000528989 LRP10Q7Z4F1 713 aa31.57■■■□□ 2.64
LDLRAD3-203ENST00000528989 RLBP1P12271 317 aa31.56■■■□□ 2.64
LDLRAD3-203ENST00000528989 PANK1Q8TE04 598 aa31.55■■■□□ 2.64
LDLRAD3-203ENST00000528989 LINC00116Q8NCU8 138 aa31.55■■■□□ 2.64
LDLRAD3-203ENST00000528989 LRRC4BQ9NT99 713 aa31.55■■■□□ 2.64
LDLRAD3-203ENST00000528989 IPO8O15397 1037 aaKnown RBP31.54■■■□□ 2.64
LDLRAD3-203ENST00000528989 AIMP1Q12904 312 aaKnown RBP31.54■■■□□ 2.64
LDLRAD3-203ENST00000528989 HYPKQ9NX55 129 aa31.54■■■□□ 2.64
LDLRAD3-203ENST00000528989 TJP1Q07157 1748 aa31.53■■■□□ 2.64
LDLRAD3-203ENST00000528989 PROM2Q8N271 834 aa31.53■■■□□ 2.64
LDLRAD3-203ENST00000528989 ZBTB1Q9Y2K1 713 aa31.53■■■□□ 2.64
LDLRAD3-203ENST00000528989 FKBP5Q13451 457 aaPredicted RBP31.52■■■□□ 2.64
LDLRAD3-203ENST00000528989 LAMB4A4D0S4 1761 aa31.52■■■□□ 2.64
LDLRAD3-203ENST00000528989 CRKLP46109 303 aaKnown RBP31.52■■■□□ 2.64
LDLRAD3-203ENST00000528989 INTS5Q6P9B9 1019 aaKnown RBP31.52■■■□□ 2.64
LDLRAD3-203ENST00000528989 ARHGAP45Q92619 1136 aa31.52■■■□□ 2.64
LDLRAD3-203ENST00000528989 F6X3S4 739 aa31.51■■■□□ 2.63
LDLRAD3-203ENST00000528989 COPS6Q7L5N1 327 aa31.51■■■□□ 2.63
LDLRAD3-203ENST00000528989 ZNF330Q9Y3S2 320 aaPredicted RBP31.5■■■□□ 2.63
LDLRAD3-203ENST00000528989 PTPRCP08575 1304 aa31.5■■■□□ 2.63
LDLRAD3-203ENST00000528989 FKBP8Q14318 412 aa31.5■■■□□ 2.63
LDLRAD3-203ENST00000528989 XAGE3Q8WTP9 111 aa31.5■■■□□ 2.63
LDLRAD3-203ENST00000528989 ERBB4Q15303 1308 aa31.49■■■□□ 2.63
LDLRAD3-203ENST00000528989 PLSCR1O15162 318 aa31.49■■■□□ 2.63
LDLRAD3-203ENST00000528989 DZIP1LQ8IYY4 767 aaKnown RBP31.49■■■□□ 2.63
LDLRAD3-203ENST00000528989 TXNRD1Q16881 649 aa31.48■■■□□ 2.63
LDLRAD3-203ENST00000528989 CCDC87Q9NVE4 849 aa31.48■■■□□ 2.63
LDLRAD3-203ENST00000528989 LY75O60449 1722 aa31.47■■■□□ 2.63
LDLRAD3-203ENST00000528989 NEFLP07196 543 aa31.47■■■□□ 2.63
LDLRAD3-203ENST00000528989 PDE3AQ14432 1141 aa31.47■■■□□ 2.63
LDLRAD3-203ENST00000528989 FTSJ3Q8IY81 847 aaKnown RBP31.47■■■□□ 2.63
LDLRAD3-203ENST00000528989 API5Q9BZZ5 524 aaKnown RBP31.46■■■□□ 2.63
LDLRAD3-203ENST00000528989 PI4KAP2A4QPH2 592 aa31.46■■■□□ 2.63
LDLRAD3-203ENST00000528989 PI4KAP1Q8N8J0 262 aa31.46■■■□□ 2.63
LDLRAD3-203ENST00000528989 COG6Q9Y2V7 657 aa31.46■■■□□ 2.63
LDLRAD3-203ENST00000528989 TTLL7Q6ZT98 887 aa31.45■■■□□ 2.63
LDLRAD3-203ENST00000528989 SMIM5Q71RC9 77 aa31.45■■■□□ 2.63
LDLRAD3-203ENST00000528989 CRBNQ96SW2 442 aa31.44■■■□□ 2.62
LDLRAD3-203ENST00000528989 TMEM57Q8N5G2 664 aa31.44■■■□□ 2.62
LDLRAD3-203ENST00000528989 CACNA1FO60840 1977 aa31.43■■■□□ 2.62
LDLRAD3-203ENST00000528989 SLC27A3Q5K4L6 730 aa31.43■■■□□ 2.62
LDLRAD3-203ENST00000528989 SLC4A10Q6U841 1118 aa31.43■■■□□ 2.62
LDLRAD3-203ENST00000528989 MYH14Q7Z406 1995 aaKnown RBP31.43■■■□□ 2.62
LDLRAD3-203ENST00000528989 ZNF831Q5JPB2 1677 aa31.42■■■□□ 2.62
LDLRAD3-203ENST00000528989 GTF3C3Q9Y5Q9 886 aa31.42■■■□□ 2.62
LDLRAD3-203ENST00000528989 ABCC4O15439 1325 aa31.42■■■□□ 2.62
LDLRAD3-203ENST00000528989 ADCY9O60503 1353 aa31.42■■■□□ 2.62
LDLRAD3-203ENST00000528989 TNS1Q9HBL0 1735 aaKnown RBP31.42■■■□□ 2.62
LDLRAD3-203ENST00000528989 EN1Q05925 392 aaPredicted RBP31.42■■■□□ 2.62
LDLRAD3-203ENST00000528989 EXOC6Q8TAG9 804 aa31.42■■■□□ 2.62
LDLRAD3-203ENST00000528989 ARXQ96QS3 562 aa31.42■■■□□ 2.62
LDLRAD3-203ENST00000528989 CICQ96RK0 1608 aaPredicted RBP31.41■■■□□ 2.62
LDLRAD3-203ENST00000528989 EIF5P55010 431 aaKnown RBP31.4■■■□□ 2.62
LDLRAD3-203ENST00000528989 ANKRD13DQ6ZTN6 518 aa31.4■■■□□ 2.62
LDLRAD3-203ENST00000528989 MAP3K2Q9Y2U5 619 aa31.4■■■□□ 2.62
LDLRAD3-203ENST00000528989 IL6STP40189 918 aaPredicted RBP31.4■■■□□ 2.62
LDLRAD3-203ENST00000528989 KSR2Q6VAB6 950 aa31.4■■■□□ 2.62
LDLRAD3-203ENST00000528989 AMIGO3Q86WK7 504 aa31.4■■■□□ 2.62
LDLRAD3-203ENST00000528989 COL5A3P25940 1745 aaPredicted RBP31.39■■■□□ 2.62
LDLRAD3-203ENST00000528989 CNTNAP4Q9C0A0 1308 aa31.39■■■□□ 2.62
LDLRAD3-203ENST00000528989 EZH2Q15910 746 aaKnown RBP31.38■■■□□ 2.61
LDLRAD3-203ENST00000528989 DEFB132Q7Z7B7 95 aa31.38■■■□□ 2.61
LDLRAD3-203ENST00000528989 MS4A1P11836 297 aa31.38■■■□□ 2.61
LDLRAD3-203ENST00000528989 RC3H1Q5TC82 1133 aaKnown RBP31.38■■■□□ 2.61
LDLRAD3-203ENST00000528989 RIC3Q7Z5B4 369 aa31.38■■■□□ 2.61
LDLRAD3-203ENST00000528989 ITPRIPQ8IWB1 547 aa31.38■■■□□ 2.61
LDLRAD3-203ENST00000528989 DDX58O95786 925 aaKnown RBP31.37■■■□□ 2.61
LDLRAD3-203ENST00000528989 DNAAF4Q8WXU2 420 aa31.37■■■□□ 2.61
LDLRAD3-203ENST00000528989 CAMKK2Q96RR4 588 aa31.37■■■□□ 2.61
LDLRAD3-203ENST00000528989 ZBTB3Q9H5J0 574 aa31.37■■■□□ 2.61
LDLRAD3-203ENST00000528989 TBC1D2BQ9UPU7 963 aa31.37■■■□□ 2.61
LDLRAD3-203ENST00000528989 GNPATO15228 680 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms