RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 FAM182BQ5T319 152 aa15.07■□□□□ 0
TM9SF1-207ENST00000528895 ZKSCAN2Q63HK3 967 aa15.07■□□□□ 0
TM9SF1-207ENST00000528895 MRPL50Q8N5N7 158 aaKnown RBP15.07■□□□□ 0
TM9SF1-207ENST00000528895 FRAT1Q92837 279 aaPredicted RBP15.07■□□□□ 0
TM9SF1-207ENST00000528895 ASAP1Q9ULH1 1129 aa15.07■□□□□ 0
TM9SF1-207ENST00000528895 PALLDQ8WX93 1383 aa15.07■□□□□ 0
TM9SF1-207ENST00000528895 SBF2Q86WG5 1849 aa15.06■□□□□ 0
TM9SF1-207ENST00000528895 PTCD1O75127 700 aaKnown RBP15.06■□□□□ 0
TM9SF1-207ENST00000528895 EIF2S2P20042 333 aaKnown RBP15.06■□□□□ 0
TM9SF1-207ENST00000528895 TEX13AQ9BXU3 409 aaPredicted RBP15.06■□□□□ 0
TM9SF1-207ENST00000528895 PTPRCP08575 1304 aa15.06■□□□□ 0
TM9SF1-207ENST00000528895 ERBB4Q15303 1308 aa15.06■□□□□ 0
TM9SF1-207ENST00000528895 BTAF1O14981 1849 aa15.06■□□□□ 0
TM9SF1-207ENST00000528895 NECTIN2Q92692 538 aa15.05■□□□□ -0
TM9SF1-207ENST00000528895 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
TM9SF1-207ENST00000528895 DBF4Q9UBU7 674 aaPredicted RBP15.05■□□□□ -0
TM9SF1-207ENST00000528895 ZNF831Q5JPB2 1677 aa15.05■□□□□ -0
TM9SF1-207ENST00000528895 TCERG1O14776 1098 aaKnown RBP15.04■□□□□ -0
TM9SF1-207ENST00000528895 KCNQ2O43526 872 aa15.04■□□□□ -0
TM9SF1-207ENST00000528895 FTSJ3Q8IY81 847 aaKnown RBP15.04■□□□□ -0
TM9SF1-207ENST00000528895 API5Q9BZZ5 524 aaKnown RBP15.04■□□□□ -0
TM9SF1-207ENST00000528895 RNF39Q9H2S5 420 aa15.04■□□□□ -0
TM9SF1-207ENST00000528895 TJP1Q07157 1748 aa15.03■□□□□ -0
TM9SF1-207ENST00000528895 PLIN1O60240 522 aa15.03■□□□□ -0
TM9SF1-207ENST00000528895 SLC4A2P04920 1241 aa15.03■□□□□ -0
TM9SF1-207ENST00000528895 PDE3AQ14432 1141 aa15.03■□□□□ -0
TM9SF1-207ENST00000528895 ATF7IPQ6VMQ6 1270 aa15.03■□□□□ -0
TM9SF1-207ENST00000528895 ARHGAP45Q92619 1136 aa15.03■□□□□ -0
TM9SF1-207ENST00000528895 BCL11BQ9C0K0 894 aaPredicted RBP15.03■□□□□ -0
TM9SF1-207ENST00000528895 NOB1Q9ULX3 412 aaKnown RBP15.03■□□□□ -0
TM9SF1-207ENST00000528895 CACNA1FO60840 1977 aa15.02■□□□□ -0
TM9SF1-207ENST00000528895 PRAMEF22A3QJZ6 481 aa15.02■□□□□ -0
TM9SF1-207ENST00000528895 STARD3NLO95772 234 aa15.02■□□□□ -0
TM9SF1-207ENST00000528895 R3HDM1Q15032 1099 aaKnown RBP15.02■□□□□ -0
TM9SF1-207ENST00000528895 DDX21Q9NR30 783 aaKnown RBP eCLIP15.02■□□□□ -0
TM9SF1-207ENST00000528895 CHPF2Q9P2E5 772 aa15.02■□□□□ -0
TM9SF1-207ENST00000528895 RREB1Q92766 1687 aa15.02□□□□□ -0.01
TM9SF1-207ENST00000528895 LOC102724428A0A0B4J2F2 783 aa15.01□□□□□ -0.01
TM9SF1-207ENST00000528895 SIK1P57059 783 aa15.01□□□□□ -0.01
TM9SF1-207ENST00000528895 FLIIQ13045 1269 aa15.01□□□□□ -0.01
TM9SF1-207ENST00000528895 EZH2Q15910 746 aaKnown RBP15.01□□□□□ -0.01
TM9SF1-207ENST00000528895 HYPKQ9NX55 129 aa15.01□□□□□ -0.01
TM9SF1-207ENST00000528895 PXDNLA1KZ92 1463 aa15.01□□□□□ -0.01
TM9SF1-207ENST00000528895 TRIM27P14373 513 aa15□□□□□ -0.01
TM9SF1-207ENST00000528895 IRX6P78412 446 aaPredicted RBP15□□□□□ -0.01
TM9SF1-207ENST00000528895 FKBP8Q14318 412 aa15□□□□□ -0.01
TM9SF1-207ENST00000528895 ERICH6BQ5W0A0 696 aa15□□□□□ -0.01
TM9SF1-207ENST00000528895 DNAJC10Q8IXB1 793 aa15□□□□□ -0.01
TM9SF1-207ENST00000528895 DZIP1LQ8IYY4 767 aaKnown RBP15□□□□□ -0.01
TM9SF1-207ENST00000528895 CAMKK2Q96RR4 588 aa15□□□□□ -0.01
TM9SF1-207ENST00000528895 KAT6BQ8WYB5 2073 aa15□□□□□ -0.01
TM9SF1-207ENST00000528895 LY75O60449 1722 aa15□□□□□ -0.01
TM9SF1-207ENST00000528895 NUP188Q5SRE5 1749 aa15□□□□□ -0.01
TM9SF1-207ENST00000528895 TRIM37O94972 964 aa14.99□□□□□ -0.01
TM9SF1-207ENST00000528895 DDX58O95786 925 aaKnown RBP14.99□□□□□ -0.01
TM9SF1-207ENST00000528895 HMGB2P26583 209 aaKnown RBP14.99□□□□□ -0.01
TM9SF1-207ENST00000528895 ATP6V1AP38606 617 aa14.99□□□□□ -0.01
TM9SF1-207ENST00000528895 FKBP5Q13451 457 aaPredicted RBP14.99□□□□□ -0.01
TM9SF1-207ENST00000528895 USP16Q9Y5T5 823 aa14.99□□□□□ -0.01
TM9SF1-207ENST00000528895 ABCC4O15439 1325 aa14.98□□□□□ -0.01
TM9SF1-207ENST00000528895 COL5A3P25940 1745 aaPredicted RBP14.98□□□□□ -0.01
TM9SF1-207ENST00000528895 GTF3C3Q9Y5Q9 886 aa14.98□□□□□ -0.01
TM9SF1-207ENST00000528895 MYL6BP14649 208 aa14.97□□□□□ -0.01
TM9SF1-207ENST00000528895 NPM2Q86SE8 214 aaKnown RBP14.97□□□□□ -0.01
TM9SF1-207ENST00000528895 CLUAP1Q96AJ1 413 aa14.97□□□□□ -0.01
TM9SF1-207ENST00000528895 RGPD3A6NKT7 1758 aaPredicted RBP14.96□□□□□ -0.01
TM9SF1-207ENST00000528895 RGPD4Q7Z3J3 1758 aa14.96□□□□□ -0.01
TM9SF1-207ENST00000528895 N4BP2Q86UW6 1770 aaPredicted RBP14.96□□□□□ -0.01
TM9SF1-207ENST00000528895 C20orf194Q5TEA3 1177 aa14.96□□□□□ -0.01
TM9SF1-207ENST00000528895 SLC4A9Q96Q91 983 aa14.96□□□□□ -0.01
TM9SF1-207ENST00000528895 CHMP4BQ9H444 224 aaKnown RBP14.96□□□□□ -0.01
TM9SF1-207ENST00000528895 CCNL1Q9UK58 526 aaPredicted RBP14.96□□□□□ -0.01
TM9SF1-207ENST00000528895 APBA3O96018 575 aa14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 ANXA1P04083 346 aa14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 CYP19A1P11511 503 aaPredicted RBP14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 MVPQ14764 893 aaKnown RBP14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 PDIA6Q15084 440 aa14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 PROSER3Q2NL68 480 aa14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 G2E3Q7L622 706 aa14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 PTF1AQ7RTS3 328 aa14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 ITPRIPQ8IWB1 547 aa14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 PANK1Q8TE04 598 aa14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 CRBNQ96SW2 442 aa14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 PHAXQ9H814 394 aaKnown RBP14.95□□□□□ -0.02
TM9SF1-207ENST00000528895 CCT4P50991 539 aaKnown RBP14.94□□□□□ -0.02
TM9SF1-207ENST00000528895 CCDC87Q9NVE4 849 aa14.94□□□□□ -0.02
TM9SF1-207ENST00000528895 DDX19BQ9UMR2 479 aa14.94□□□□□ -0.02
TM9SF1-207ENST00000528895 CNTNAP4Q9C0A0 1308 aa14.93□□□□□ -0.02
TM9SF1-207ENST00000528895 A1BGP04217 495 aa14.93□□□□□ -0.02
TM9SF1-207ENST00000528895 RLBP1P12271 317 aa14.93□□□□□ -0.02
TM9SF1-207ENST00000528895 AIMP1Q12904 312 aaKnown RBP14.93□□□□□ -0.02
TM9SF1-207ENST00000528895 ITPK1Q13572 414 aa14.93□□□□□ -0.02
TM9SF1-207ENST00000528895 AAMPQ13685 434 aa14.93□□□□□ -0.02
TM9SF1-207ENST00000528895 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
TM9SF1-207ENST00000528895 KIF6Q6ZMV9 814 aa14.93□□□□□ -0.02
TM9SF1-207ENST00000528895 XAGE3Q8WTP9 111 aa14.93□□□□□ -0.02
TM9SF1-207ENST00000528895 TNNQ9UQP3 1299 aa14.93□□□□□ -0.02
TM9SF1-207ENST00000528895 COG6Q9Y2V7 657 aa14.93□□□□□ -0.02
TM9SF1-207ENST00000528895 ATP10DQ9P241 1426 aa14.92□□□□□ -0.02
TM9SF1-207ENST00000528895 NBPF26B4DH59 902 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms